FFCP PHASE1:Hg19::chr1:28696152..28696261,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65979 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25793 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000463428,ENST00000493669_5end | |||
|description=CAGE_peak_1_at_PHACTR4_5end | |||
|id=chr1:28696152..28696261,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.14e-18!115;UBERON:0000073!9.31e-17!94;UBERON:0001016!9.31e-17!94;UBERON:0001017!1.63e-16!82;UBERON:0005743!2.10e-16!86;UBERON:0002346!6.85e-16!90;UBERON:0001049!1.47e-15!57;UBERON:0005068!1.47e-15!57;UBERON:0006241!1.47e-15!57;UBERON:0007135!1.47e-15!57;UBERON:0003075!2.02e-14!86;UBERON:0007284!2.02e-14!86;UBERON:0000955!8.02e-13!69;UBERON:0006238!8.02e-13!69;UBERON:0002616!2.99e-12!59;UBERON:0000924!8.58e-11!173;UBERON:0006601!8.58e-11!173;UBERON:0002780!3.13e-10!41;UBERON:0001890!3.13e-10!41;UBERON:0006240!3.13e-10!41;UBERON:0003080!3.36e-10!42;UBERON:0004121!1.00e-09!169;UBERON:0003056!3.89e-09!61;UBERON:0002020!4.15e-09!34;UBERON:0003528!4.15e-09!34;UBERON:0001893!9.12e-09!34;UBERON:0002791!9.99e-09!33;UBERON:0000153!3.15e-08!129;UBERON:0007811!3.15e-08!129;UBERON:0001869!8.24e-08!32;UBERON:0000033!2.45e-07!123;UBERON:0003076!6.11e-07!15;UBERON:0003057!6.11e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;7.92e-09;53!UBERON:0002616;7.92e-09;53!UBERON:0002780;5.06e-08;41!UBERON:0001890;5.06e-08;41!UBERON:0003528;7.78e-08;34!UBERON:0002020;7.78e-08;34!UBERON:0002791;1.07e-07;32!UBERON:0001893;1.24e-07;34!UBERON:0001869;2.90e-07;32!UBERON:0001016;4.42e-07;83!UBERON:0001017;8.08e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.26e-18,114;UBERON:0001016,7.93e-17,89;UBERON:0001017,1.61e-16,81;UBERON:0001049,1.32e-15,56;UBERON:0005068,1.32e-15,56;UBERON:0006241,1.32e-15,56;UBERON:0007135,1.32e-15,56;UBERON:0002346,5.34e-15,86;UBERON:0000073,2.65e-14,53;UBERON:0002616,2.65e-14,53;UBERON:0003075,1.51e-13,82;UBERON:0007284,1.51e-13,82;UBERON:0000955,8.00e-13,68;UBERON:0006238,8.00e-13,68;UBERON:0002780,3.13e-10,41;UBERON:0001890,3.13e-10,41;UBERON:0003080,3.13e-10,41;UBERON:0006240,3.13e-10,41;UBERON:0003056,1.33e-09,61;UBERON:0004121,1.34e-09,171;UBERON:0000924,1.34e-09,171;UBERON:0006601,1.34e-09,171;UBERON:0003528,4.15e-09,34;UBERON:0002020,4.15e-09,34;UBERON:0010371,7.57e-09,104;UBERON:0011216,8.42e-09,223;UBERON:0001893,9.12e-09,34;UBERON:0002791,3.08e-08,32;UBERON:0001869,8.24e-08,32;UBERON:0003076,6.11e-07,15;UBERON:0003057,6.11e-07,15 | |||
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| |||
|short_description=p1@PHACTR4 | |||
}} |
Revision as of 17:25, 10 January 2014
Short description: | p1@PHACTR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PHACTR4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000463428, ENST00000493669_5end |
EntrezGene: | PHACTR4 |
HGNC: | 25793 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.26e-18 | 114 |
nervous system | 7.93e-17 | 89 |
central nervous system | 1.61e-16 | 81 |
neural tube | 1.32e-15 | 56 |
neural rod | 1.32e-15 | 56 |
future spinal cord | 1.32e-15 | 56 |
neural keel | 1.32e-15 | 56 |
neurectoderm | 5.34e-15 | 86 |
regional part of nervous system | 2.65e-14 | 53 |
regional part of brain | 2.65e-14 | 53 |
neural plate | 1.51e-13 | 82 |
presumptive neural plate | 1.51e-13 | 82 |
brain | 8.00e-13 | 68 |
future brain | 8.00e-13 | 68 |
regional part of forebrain | 3.13e-10 | 41 |
forebrain | 3.13e-10 | 41 |
anterior neural tube | 3.13e-10 | 41 |
future forebrain | 3.13e-10 | 41 |
pre-chordal neural plate | 1.33e-09 | 61 |
ectoderm-derived structure | 1.34e-09 | 171 |
ectoderm | 1.34e-09 | 171 |
presumptive ectoderm | 1.34e-09 | 171 |
brain grey matter | 4.15e-09 | 34 |
gray matter | 4.15e-09 | 34 |
ecto-epithelium | 7.57e-09 | 104 |
organ system subdivision | 8.42e-09 | 223 |
telencephalon | 9.12e-09 | 34 |
regional part of telencephalon | 3.08e-08 | 32 |
cerebral hemisphere | 8.24e-08 | 32 |
posterior neural tube | 6.11e-07 | 15 |
chordal neural plate | 6.11e-07 | 15 |