FFCP PHASE1:Hg19::chr1:25876348..25876361,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26119 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18640 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-90bp_to_ENST00000485476_5end | |||
|coexpression_cluster_id=C169 | |||
|description=CAGE_peak_5_at_LDLRAP1_5end | |||
|id=chr1:25876348..25876361,+ | |||
|ontology_enrichment_celltype=CL:0000542!7.50e-26!53;CL:0000051!7.50e-26!53;CL:0000838!3.50e-24!52;CL:0002032!6.48e-17!165;CL:0000837!6.48e-17!165;CL:0000037!9.48e-17!172;CL:0000566!9.48e-17!172;CL:0000084!1.91e-15!25;CL:0000827!1.91e-15!25;CL:0000988!3.60e-15!182;CL:0000791!7.59e-14!18;CL:0000789!7.59e-14!18;CL:0002420!7.59e-14!18;CL:0002419!7.59e-14!18;CL:0000790!7.59e-14!18;CL:0002087!1.68e-11!119;CL:0000945!4.13e-10!24;CL:0000826!4.13e-10!24;CL:0002031!9.25e-10!124;CL:0000625!9.92e-10!11;CL:0000738!1.35e-08!140 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.04e-12;24!CL:0000815;2.48e-10;2!CL:0000792;2.48e-10;2!CL:0002677;2.48e-10;2!CL:0000542;1.97e-07;53!CL:0000898;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.44e-16,53;CL:0000051,2.44e-16,53;CL:0000945,1.66e-12,24;CL:0000826,1.66e-12,24;CL:0000838,2.22e-12,52;CL:0000815,3.58e-10,2;CL:0000792,3.58e-10,2;CL:0002677,3.58e-10,2;CL:0002032,1.99e-08,161;CL:0000837,1.99e-08,161;CL:0000037,4.74e-08,168;CL:0000988,1.32e-07,177;CL:0002087,2.83e-07,115;CL:0000898,3.35e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.97e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!9.00e-19!51;DOID:0060083!9.00e-19!51;DOID:1240!1.30e-13!39;DOID:8692!8.34e-12!31;DOID:0060058!4.08e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:2355;8.94e-20;1!DOID:12603;2.71e-19;1!DOID:74;1.43e-10;2!DOID:0060058;3.03e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,8.95e-20,1;DOID:12603,4.69e-19,1;DOID:74,1.43e-10,2;DOID:2531,6.16e-09,51;DOID:0060083,6.16e-09,51;DOID:0060058,3.25e-08,10;DOID:1240,1.06e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98674854944673,1.9704141467987,1.73163718890094,0,0,0,0,0,0,0.154934401160603,0,0.293600439334847,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0.205601498999509,0.668745981562712,0.977766799900771,0,1.94826728407911,0.111410456885174,1.17842362989935,0,0.541607727530031,0.512365278902701,0.260118695119756,0,0,0,0.296573126324121,0.535081656179426,0,0.339928028092699,0,0.34362744548263,0,0.318565414324097,0,0,0.301150238155546,0.383959833463255,0,0.473554504088034,0.821127996921047,0.201606743224732,0,0.144824403882799,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,1.30062222588003,0,0,0,0.399158742865633,0.191505370132367,0.211673582723883,0,0,0.684704037099577,0.156679895773023,0,0,0,0,2.12923118845163,0,0,0.223676107892416,0,0.976940477010201,1.39203086947621,0,0,0.33307196799782,0,0,0,0,1.33732061132974,0,0,0,0,0,0,0,0.16480387422676,0,0,0.552567831062295,0.251932747854276,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0.552896299656123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0.75901493089674,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,9.90677985169678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0.592834895693833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0.688859918643263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,1.88126918544609,0,0,0,0,0,0,0.187967835959707,0,0.599646935549574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.305966489225945,0,0.643264296743914,0,0,0,0,0,0.213233981900981,0,0,0.124149428591716,0.224263725161227,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@LDLRAP1 | |||
}} |
Revision as of 17:09, 10 January 2014
Short description: | p5@LDLRAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LDLRAP1_5end |
Coexpression cluster: | C169_hereditary_adult_gall_lymphangiectasia_chronic_b_choriocarcinoma |
Association with transcript: | -90bp_to_ENST00000485476_5end |
EntrezGene: | LDLRAP1 |
HGNC: | 18640 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.44e-16 | 53 |
common lymphoid progenitor | 2.44e-16 | 53 |
lymphocyte of B lineage | 1.66e-12 | 24 |
pro-B cell | 1.66e-12 | 24 |
lymphoid lineage restricted progenitor cell | 2.22e-12 | 52 |
regulatory T cell | 3.58e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.58e-10 | 2 |
naive regulatory T cell | 3.58e-10 | 2 |
hematopoietic oligopotent progenitor cell | 1.99e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.99e-08 | 161 |
hematopoietic stem cell | 4.74e-08 | 168 |
hematopoietic cell | 1.32e-07 | 177 |
nongranular leukocyte | 2.83e-07 | 115 |
naive T cell | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
anemia | 8.95e-20 | 1 |
acute leukemia | 4.69e-19 | 1 |
hematopoietic system disease | 1.43e-10 | 2 |
hematologic cancer | 6.16e-09 | 51 |
immune system cancer | 6.16e-09 | 51 |
lymphoma | 3.25e-08 | 10 |
leukemia | 1.06e-07 | 39 |