FFCP PHASE1:Hg19::chr1:25291275..25291301,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=864 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10473 | |||
|TSSclassifier=weak | |||
|UniProt=B1AJV5,Q13761 | |||
|association_with_transcript=199bp_to_ENST00000399916,NM_001031680,uc001bjr.2,uc009vrk.2_5end | |||
|coexpression_cluster_id=C77 | |||
|description=CAGE_peak_12_at_RUNX3_5end | |||
|id=chr1:25291275..25291301,- | |||
|ontology_enrichment_celltype=CL:0000838!7.17e-15!52;CL:0000542!1.73e-14!53;CL:0000051!1.73e-14!53;CL:0000988!1.81e-13!182;CL:0002032!3.85e-13!165;CL:0000837!3.85e-13!165;CL:0000037!3.32e-12!172;CL:0000566!3.32e-12!172;CL:0000084!2.99e-10!25;CL:0000827!2.99e-10!25;CL:0000738!2.28e-08!140;CL:0002031!6.08e-08!124;CL:0002087!9.57e-08!119;CL:0000453!1.02e-07!5;CL:0002556!6.13e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000062;9.18e-21;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,3.90e-17,11;CL:0000375,3.90e-17,11;CL:0000335,3.90e-17,11 | |||
|ontology_enrichment_development_v019=CL:0000335;4.00e-17;11 | |||
|ontology_enrichment_disease=DOID:2531!2.07e-10!51;DOID:0060083!2.07e-10!51;DOID:1240!4.19e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:630;5.71e-21;1!DOID:0050177;5.71e-21;1!DOID:0050427;5.71e-21;1!DOID:1909;2.35e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:630,3.45e-21,1;DOID:0050177,3.45e-21,1;DOID:0050427,3.45e-21,1;DOID:1909,2.47e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001758!6.13e-07!6;UBERON:0003672!6.13e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001474;1.00e-10;18!UBERON:0001434;1.00e-09;36!UBERON:0004765;1.32e-07;26 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,1.83392173795083,0.821005894499457,0.865818594450472,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0.941211697713023,0.272906150057846,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.786021525498329,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0.829050053357545,0,0.14828656316206,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,1.31693286264251,0.30648779579902,0.300476117813194,0,0.717558542755448,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,0.197030760201927,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.95201521319232,4.95056999523528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640276590135727,0,0.399158742865633,0,0.846694330895531,0,0,0,0,0,0.846458889008016,0.481764225311099,0.403599414382095,0,0,0,0,0,0.19538809540204,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0.494411622680279,0,0,0,0,0,0.615424027305347,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0.0969890164884194,0,0,0.411125773940253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407992870545287,0,0,0,0,0,1.8402114799552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85291067026445,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0.982829546539238,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,5.17182177502314,0,1.81534561833168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.921871900446234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0,0,0.599646935549574,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,1.9234109538194 | |||
|short_description=p12@RUNX3 | |||
}} |
Revision as of 17:07, 10 January 2014
Short description: | p12@RUNX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_RUNX3_5end |
Coexpression cluster: | C77_Saos2_osteosarcoma_Neutrophils_Natural_Chondrocyte_Basophils_CD8 |
Association with transcript: | 199bp_to_ENST00000399916, NM_001031680, uc001bjr.2, uc009vrk.2_5end |
EntrezGene: | RUNX3 |
HGNC: | 10473 |
UniProt: | B1AJV5Q13761 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 3.90e-17 | 11 |
osteoprogenitor cell | 3.90e-17 | 11 |
mesenchyme condensation cell | 3.90e-17 | 11 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 3.45e-21 | 1 |
monogenic disease | 3.45e-21 | 1 |
xeroderma pigmentosum | 3.45e-21 | 1 |
melanoma | 2.47e-11 | 2 |