FFCP PHASE1:Hg19::chr1:24286287..24286326,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100505603,55629 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23158 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NPJ4 | |||
|association_with_transcript=0bp_to_ENST00000334351,ENST00000374468,NM_017761,uc001big.2_5end | |||
|coexpression_cluster_id=C364 | |||
|description=CAGE_peak_1_at_PNRC2_5end | |||
|id=chr1:24286287..24286326,+ | |||
|ontology_enrichment_celltype=CL:0000037!5.29e-49!172;CL:0000566!5.29e-49!172;CL:0002032!1.33e-46!165;CL:0000837!1.33e-46!165;CL:0000738!2.69e-44!140;CL:0000988!7.12e-43!182;CL:0002031!2.32e-39!124;CL:0002087!1.26e-35!119;CL:0000763!2.02e-32!112;CL:0000049!2.02e-32!112;CL:0000766!4.38e-27!76;CL:0000557!1.00e-25!71;CL:0000839!1.11e-25!70;CL:0002057!1.19e-25!42;CL:0000860!1.25e-25!45;CL:0002009!3.54e-23!65;CL:0002194!4.05e-22!63;CL:0000576!4.05e-22!63;CL:0000040!4.05e-22!63;CL:0000559!4.05e-22!63;CL:0000542!2.31e-12!53;CL:0000051!2.31e-12!53;CL:0000838!2.39e-12!52;CL:0000134!1.17e-09!358;CL:0000791!7.68e-09!18;CL:0000789!7.68e-09!18;CL:0002420!7.68e-09!18;CL:0002419!7.68e-09!18;CL:0000790!7.68e-09!18;CL:0002320!1.35e-08!365;CL:0000219!1.59e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.77e-20;33!CL:0002057;5.77e-20;33!CL:0000576;5.15e-16;48!CL:0000473;8.09e-16;39!CL:0000234;8.09e-16;39!CL:0000766;2.32e-13;69!CL:0002087;2.54e-11;104!CL:0000763;7.47e-10;100!CL:0000738;1.53e-09;136!CL:0000791;8.76e-09;18!CL:0000789;8.76e-09;18!CL:0002419;8.76e-09;18!CL:0000988;3.50e-08;177!CL:0000542;1.37e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.48e-49,168;CL:0002032,6.09e-47,161;CL:0000837,6.09e-47,161;CL:0000738,9.09e-45,136;CL:0000988,5.32e-44,177;CL:0002031,7.23e-40,120;CL:0002087,4.27e-36,115;CL:0000763,7.07e-33,108;CL:0000049,7.07e-33,108;CL:0000766,8.70e-28,72;CL:0000557,1.88e-26,67;CL:0000839,2.01e-26,66;CL:0000860,1.19e-25,42;CL:0002057,1.19e-25,42;CL:0000473,9.04e-25,48;CL:0000234,9.04e-25,48;CL:0002009,6.77e-24,61;CL:0002194,7.99e-23,59;CL:0000576,7.99e-23,59;CL:0000040,7.99e-23,59;CL:0000559,7.99e-23,59;CL:0000542,2.31e-12,53;CL:0000051,2.31e-12,53;CL:0000838,2.39e-12,52;CL:0000134,1.40e-09,354;CL:0000791,7.68e-09,18;CL:0000789,7.68e-09,18;CL:0002420,7.68e-09,18;CL:0002419,7.68e-09,18;CL:0000790,7.68e-09,18;CL:0002320,1.65e-08,361;CL:0000219,1.89e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.27e-18;42!CL:0000049;1.54e-09;108!CL:0000790;8.76e-09;18!CL:0000051;1.37e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.99e-25!102;UBERON:0003061!3.99e-25!102;UBERON:0002193!8.04e-22!112;UBERON:0002371!4.72e-21!80;UBERON:0001474!1.56e-19!86;UBERON:0004765!1.41e-16!101;UBERON:0001434!1.41e-16!101;UBERON:0002405!8.70e-12!115;UBERON:0007023!1.78e-08!115;UBERON:0002384!4.86e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.73e-25,98;UBERON:0003061,1.73e-25,98;UBERON:0002193,5.00e-22,108;UBERON:0002371,1.74e-21,76;UBERON:0001474,7.29e-20,82;UBERON:0004765,1.36e-18,90;UBERON:0002405,4.47e-18,93;UBERON:0001434,5.31e-16,100;UBERON:0007023,1.58e-08,114;UBERON:0002384,5.91e-08,371 | |||
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| |||
|short_description=p1@PNRC2 | |||
}} |
Revision as of 17:03, 10 January 2014
Short description: | p1@PNRC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PNRC2_5end |
Coexpression cluster: | C364_CD14_immature_CD14CD16_Aortic_CD4_Reticulocytes_Basophils |
Association with transcript: | 0bp_to_ENST00000334351, ENST00000374468, NM_017761, uc001big.2_5end |
EntrezGene: | 100505603,55629 |
HGNC: | 23158 |
UniProt: | Q9NPJ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.73e-25 | 98 |
blood island | 1.73e-25 | 98 |
hemolymphoid system | 5.00e-22 | 108 |
bone marrow | 1.74e-21 | 76 |
bone element | 7.29e-20 | 82 |
skeletal element | 1.36e-18 | 90 |
immune system | 4.47e-18 | 93 |
skeletal system | 5.31e-16 | 100 |
adult organism | 1.58e-08 | 114 |
connective tissue | 5.91e-08 | 371 |