FFCP PHASE1:Hg19::chr1:20945236..20945253,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1632 | |||
|description=CAGE_peak_at_chr1:20945236..20945253,+ | |||
|id=chr1:20945236..20945253,+ | |||
|ontology_enrichment_celltype=CL:0002194!4.84e-23!63;CL:0000576!4.84e-23!63;CL:0000040!4.84e-23!63;CL:0000559!4.84e-23!63;CL:0000860!1.70e-22!45;CL:0002009!7.35e-22!65;CL:0000766!1.15e-21!76;CL:0002057!2.17e-20!42;CL:0000839!3.21e-19!70;CL:0000557!9.71e-19!71;CL:0000763!6.32e-12!112;CL:0000049!6.32e-12!112;CL:0002087!1.04e-10!119;CL:0000738!1.77e-09!140;CL:0002031!5.08e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.73e-18;33!CL:0002057;2.73e-18;33!CL:0000473;2.02e-17;39!CL:0000234;2.02e-17;39!CL:0000775;1.21e-14;3!CL:0000766;3.24e-09;69!CL:0000576;6.13e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.08e-16,48;CL:0000234,4.08e-16,48;CL:0000775,1.24e-14,3;CL:0000766,1.51e-14,72;CL:0000860,5.51e-14,42;CL:0002057,5.51e-14,42;CL:0002194,3.19e-12,59;CL:0000576,3.19e-12,59;CL:0000040,3.19e-12,59;CL:0000559,3.19e-12,59;CL:0002009,1.01e-11,61;CL:0000839,1.33e-10,66;CL:0000557,2.13e-10,67;CL:0000763,1.59e-09,108;CL:0000049,1.59e-09,108;CL:0000738,9.94e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.75e-12;42!UBERON:0008947;3.46e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.41e-17!102;UBERON:0003061!4.41e-17!102;UBERON:0002371!7.14e-16!80;UBERON:0002193!1.85e-15!112;UBERON:0001474!9.14e-14!86;UBERON:0004765!9.98e-13!101;UBERON:0001434!9.98e-13!101;UBERON:0001737!1.67e-11!9;UBERON:0002405!2.69e-11!115;UBERON:0001557!7.08e-08!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.86e-29;9!UBERON:0001557;2.86e-29;9!UBERON:0000072;2.09e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.15e-29,9;UBERON:0001557,3.10e-13,19;UBERON:0002371,8.28e-09,76;UBERON:0002390,2.51e-08,98;UBERON:0003061,2.51e-08,98;UBERON:0004765,4.07e-08,90;UBERON:0001474,6.06e-08,82;UBERON:0008947,1.46e-07,38;UBERON:0003258,1.46e-07,38;UBERON:0002193,3.12e-07,108;UBERON:0001434,5.54e-07,100 | |||
|phase1_expression=0,0.214100523890983,0.563817616383885,0,0,0.872338524100369,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619264493264304,1.83884244895785,0,0,0,0,0,0.553995408531877,0,0.434021741431704,0.223915474239924,0,0,2.61716829803216,1.51150377475524,2.91100873425379,1.39457422143411,1.23350366406548,1.23882548358041,0.575384784644301,0.256160706529101,0.47296445977717,0.689491361473237,0,0,1.50593871634084,1.09162460023138,0.449446968890169,0.918251677112708,0,3.83602275479425,0.989553900560148,3.19141852194611,0.852449501065388,1.7412554317715,0,1.86846674698672,0.502497330513487,0.521482918420201,0,0.605399502633369,0,0,0.633765858935825,0.850417199860174,0,1.12328631146495,0.450530678524519,0.48217676009124,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0,9.03597880961416,0,0.869079113764942,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0.773043412653187,0.545492241181669,0,0.365921118388786,0.265059536642971,0.348581828608555,0.207322110030741,0,0,0,0,0,0,0,2.01121560067735,1.68584690078102,0.964044119533928,1.98529150918309,3.92182999366331,1.18635309555548,1.48314438976181,4.12065076763227,2.30848294167834,0,0,0,0,1.26755034821831,0,0,0,0,0,1.86575485194663,0,0.402115889646523,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.936017060556951,0.297262324577456,0,2.01578553838631,0.850650583454319,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,2.43247561282381,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,5.24304916763028,17.9496875522415,11.603634376209,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.413536052245775,0.647142602455851,0.213455115606889,0,0,0,0.248107807818777,0,0.280660094433074,0.384417447767103,0.511707249066704,0.482561763430822,0,0,0,0,0,0.464841513839837,0,3.80962293576241,0.828728900423067,0.114814448164607,0,0.393373244878272,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0.962221127255121,0,0,0.0941438007767792,1.29151611801369,0,0.443430153536676,0.459446800413919,0,0.764637207142375,1.70894156152249,0.238231775457789,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0.313359791546046,0,0,0,0,0,0.687010689511529,0,0,0,1.36771666781428,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898683511473268,0,0,0,11.974154617347,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.230850775511391,0,0,0,0,0.957003479195758,2.47313502185028,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.489961987071888,0,0.34945333648406,0.343972064943233,0.870806981601766,0.146178634172371,0.492692742319255,0,0,0,0.685209623233754,0.19871461170299,0,0.195551382734803,0.721429382263803,0,0.39961921916426,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,1.76828463311521,0,0.415440338029185,0,0,0,0,0,0,0.528001682597033,0,0,0,1.32418394073086,0,0,0,0.979762080328227,0,0,0,0.113312091520126,0.146552233678082,0,0,0,0.171086837884329,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,1.22368352253234,0,0,0,1.06013487567529,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785181748008205,0,0,0.462102664601353,0,0,0,0,0.20170506870352,0,0,0.163771917510097,1.33070477595341,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0.0679697329768317,0,0.590969204419841,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17144469965024,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.385870790539723,0,0,0,0,0,0,0,0,0.0939839179798536,0.257831551894309,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0.371995018166751,0,0,0,0.109265571963696,0,0.407955318967927,0,1.74600309116205,0,0.151557396436479,0,0.829169439458779,0,0,0,0,0.124149428591716,0,0,0,0.435433495793923,0,0.0673520530145875,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| |||
|short_description=p@chr1:20945236..20945253,+ | |||
}} |
Revision as of 16:49, 10 January 2014
Short description: | p@chr1:20945236..20945253, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:20945236..20945253, + |
Coexpression cluster: | C1632_Neutrophils_blood_lymph_lung_Nucleus_Whole_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.08e-16 | 48 |
phagocyte | 4.08e-16 | 48 |
neutrophil | 1.24e-14 | 3 |
myeloid leukocyte | 1.51e-14 | 72 |
classical monocyte | 5.51e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.51e-14 | 42 |
monopoietic cell | 3.19e-12 | 59 |
monocyte | 3.19e-12 | 59 |
monoblast | 3.19e-12 | 59 |
promonocyte | 3.19e-12 | 59 |
macrophage dendritic cell progenitor | 1.01e-11 | 61 |
myeloid lineage restricted progenitor cell | 1.33e-10 | 66 |
granulocyte monocyte progenitor cell | 2.13e-10 | 67 |
myeloid cell | 1.59e-09 | 108 |
common myeloid progenitor | 1.59e-09 | 108 |
leukocyte | 9.94e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.15e-29 | 9 |
upper respiratory tract | 3.10e-13 | 19 |
bone marrow | 8.28e-09 | 76 |
hematopoietic system | 2.51e-08 | 98 |
blood island | 2.51e-08 | 98 |
skeletal element | 4.07e-08 | 90 |
bone element | 6.06e-08 | 82 |
respiratory primordium | 1.46e-07 | 38 |
endoderm of foregut | 1.46e-07 | 38 |
hemolymphoid system | 3.12e-07 | 108 |
skeletal system | 5.54e-07 | 100 |