FFCP PHASE1:Hg19::chr1:2487631..2487646,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8764 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11912 | |||
|TSSclassifier=strong | |||
|UniProt=B9A034 | |||
|association_with_transcript=-14bp_to_ENST00000409119_5end | |||
|coexpression_cluster_id=C3607 | |||
|description=CAGE_peak_7_at_TNFRSF14_5end | |||
|id=chr1:2487631..2487646,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.05e-71!172;CL:0000566!1.05e-71!172;CL:0000738!2.61e-68!140;CL:0000988!5.74e-68!182;CL:0002032!2.23e-67!165;CL:0000837!2.23e-67!165;CL:0002031!3.84e-58!124;CL:0002087!3.44e-56!119;CL:0000763!5.46e-38!112;CL:0000049!5.46e-38!112;CL:0000766!1.20e-34!76;CL:0000557!2.08e-30!71;CL:0000839!6.40e-29!70;CL:0002009!2.37e-28!65;CL:0002194!9.49e-27!63;CL:0000576!9.49e-27!63;CL:0000040!9.49e-27!63;CL:0000559!9.49e-27!63;CL:0002057!4.35e-26!42;CL:0000542!9.44e-26!53;CL:0000051!9.44e-26!53;CL:0000838!1.50e-25!52;CL:0000860!4.47e-23!45;CL:0000084!3.95e-16!25;CL:0000827!3.95e-16!25;CL:0000791!8.52e-14!18;CL:0000789!8.52e-14!18;CL:0002420!8.52e-14!18;CL:0002419!8.52e-14!18;CL:0000790!8.52e-14!18;CL:0000134!9.74e-13!358;CL:0002320!6.96e-12!365;CL:0000219!6.47e-11!390;CL:0000625!4.00e-09!11;CL:0000945!5.53e-09!24;CL:0000826!5.53e-09!24;CL:0002393!5.56e-08!9;CL:0002397!5.56e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.42e-25;33!CL:0002057;2.42e-25;33!CL:0000576;8.27e-24;48!CL:0000766;2.59e-23;69!CL:0000473;2.67e-23;39!CL:0000234;2.67e-23;39!CL:0000791;4.80e-19;18!CL:0000789;4.80e-19;18!CL:0002419;4.80e-19;18!CL:0000084;1.43e-17;25!CL:0002087;4.47e-17;104!CL:0000738;6.90e-17;136!CL:0000763;5.92e-14;100!CL:0000625;1.62e-13;11!CL:0000988;1.85e-12;177!CL:0000542;9.91e-12;53!CL:0000840;4.12e-09;5!CL:0000094;7.03e-09;8!CL:0000624;1.29e-08;6!CL:0000219;4.13e-08;193!CL:0002393;1.24e-07;6!CL:0002397;1.24e-07;6!CL:0000451;5.88e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.87e-83,136;CL:0000037,1.02e-77,168;CL:0000988,8.19e-75,177;CL:0002032,8.08e-73,161;CL:0000837,8.08e-73,161;CL:0002031,1.61e-70,120;CL:0002087,5.57e-67,115;CL:0000766,7.03e-57,72;CL:0000557,2.41e-50,67;CL:0000763,2.04e-49,108;CL:0000049,2.04e-49,108;CL:0002009,8.92e-47,61;CL:0000839,1.05e-46,66;CL:0002194,3.68e-44,59;CL:0000576,3.68e-44,59;CL:0000040,3.68e-44,59;CL:0000559,3.68e-44,59;CL:0000473,2.40e-41,48;CL:0000234,2.40e-41,48;CL:0000860,3.60e-37,42;CL:0002057,3.60e-37,42;CL:0000838,4.25e-20,52;CL:0000542,1.66e-19,53;CL:0000051,1.66e-19,53;CL:0000134,1.93e-19,354;CL:0000791,4.37e-19,18;CL:0000789,4.37e-19,18;CL:0002420,4.37e-19,18;CL:0002419,4.37e-19,18;CL:0000790,4.37e-19,18;CL:0000219,1.24e-18,386;CL:0002320,1.93e-18,361;CL:0000084,1.26e-17,25;CL:0000827,1.26e-17,25;CL:0000625,1.63e-13,11;CL:0002393,1.03e-11,9;CL:0002397,1.03e-11,9;CL:0000048,7.35e-11,427;CL:0000034,1.99e-10,441;CL:0000723,2.61e-10,433;CL:0000840,4.12e-09,5;CL:0001029,4.12e-09,5;CL:0000094,4.35e-09,8;CL:0000624,1.16e-08,6;CL:0000451,6.52e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;5.18e-26;42!CL:0000790;4.80e-19;18!CL:0000049;2.04e-13;108!CL:0000051;9.91e-12;53 | |||
|ontology_enrichment_disease=DOID:2531!1.42e-07!51;DOID:0060083!1.42e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.31e-37!102;UBERON:0003061!2.31e-37!102;UBERON:0002193!4.82e-35!112;UBERON:0002371!6.32e-27!80;UBERON:0001474!3.86e-24!86;UBERON:0002405!6.30e-21!115;UBERON:0004765!3.65e-19!101;UBERON:0001434!3.65e-19!101;UBERON:0002384!6.86e-11!375;UBERON:0003081!2.20e-09!216;UBERON:0000178!1.26e-07!15;UBERON:0000179!1.26e-07!15;UBERON:0000463!1.26e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.58e-52,98;UBERON:0003061,2.58e-52,98;UBERON:0002193,2.50e-48,108;UBERON:0002371,1.55e-43,76;UBERON:0002405,2.70e-42,93;UBERON:0001474,6.54e-39,82;UBERON:0004765,1.00e-33,90;UBERON:0001434,1.92e-28,100;UBERON:0002384,4.36e-17,371;UBERON:0003081,6.40e-15,203;UBERON:0002204,3.70e-10,167 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.916960868975415,0.656804715599566,0.708397031823113,3.54027849164014,2.68680578668049,1.70297735647684,0,0,0,0.0774672005803016,0.995184627411951,0.587200878669695,4.43196326825502,2.60707781711184,2.60413044859022,6.26963327871788,5.83008598834163,4.63636021741536,1.89017710413434,4.53451132426571,3.39617685662943,3.0215774797739,9.45686142450199,5.88442104700697,1.7261543539329,2.56160706529101,1.89185783910868,3.44745680736619,5.80936215225443,6.77132432971709,1.88242339542605,5.18521685109907,2.69668181334102,3.06083892370903,6.73950956859797,3.19668562899521,0.329851300186716,2.39356389145958,1.27867425159808,0.870627715885752,6.80862269629368,3.73693349397345,1.25624332628372,3.12889751052121,2.38907729175628,1.81619850790011,3.68277635987565,2.53169909952708,5.91514801673437,7.44115049877652,4.19317291016752,1.79725809834392,3.30389164251314,1.28580469357664,11.6855224933912,12.3328339863436,12.7864907635244,1.75996244461323,1.63841583378639,1.77901850772711,2.56038133539904,1.60158394814405,2.29900975981793,1.98313461835459,0.954053754535364,0.569212969109448,1.76171156811282,1.91136614062614,2.64342657158052,1.12101712596307,0,2.75393678159366,9.03924754323079,8.63526295797939,9.52963023726865,6.51844533267181,4.73447805734733,17.534405556712,12.9236129986801,6.18672405697158,5.53834736459053,9.47813523177554,16.7799628840634,20.0291395242213,10.3595879900316,11.6067007470056,7.53488022911136,10.2317728581822,6.95606153033254,17.7710390468461,11.3309342697566,9.96373283364995,8.59068613706575,12.9040042929946,11.4683549156675,4.55758417699493,7.60361635558699,2.10805166708882,1.79181255616186,4.99722906209383,9.94464458584871,4.10563998460523,6.45141578319144,8.82552646085574,5.64815175142916,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0.261958150995425,0,0,26.2883388860294,24.3781632218974,18.8800303936789,1.66943437013739,1.71598473234038,1.11437250398869,0,0.860234595106124,0,0,0,0.550236083880135,0,0.516833518338658,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0.22452937262617,0.337834441449967,0,0,0.183201743930407,9.22462922052443,3.87780264148325,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.433099343283221,0,0,0,0,2.21595305478658,0.936017060556951,3.12125440806329,0,0,0,0,0,0.383382679165211,1.47798971368783,5.98729351289937,3.93923419527467,2.30591925467138,1.8936365013957,0.952468414382536,6.11181480893244,2.34434894420094,1.71072446022705,6.06682206949609,3.00343057843917,3.14409075893636,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0,4.86495122564762,7.03159928004977,8.43335757932127,0,0,0,0,0,0,0.672510863961164,4.72873824484625,10.1344960183973,4.87703537863044,0,0,0,0,0,4.49404214368309,2.99161459204025,2.90090859405225,0,0,0,0,0,0,0.117141414992713,0,0,1.03473071292505,0,0.368738337083406,0,0,0,1.6541442089831,4.96142661882819,6.08347079479633,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0,0,0.650060246036521,0,0,0,0,0,0,0.145016693914229,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0.282431402330337,0.43050537267123,0,0,0,1.01489521846434,0.764637207142375,7.40541343326411,6.67048971281809,5.75907182320672,0.648473311192717,0.540031437238115,10.3106272918255,0,0,0,0.371606350251437,0.28853842595289,0.355709216742071,0.478278818186467,0.798317485731266,5.745161103971,3.59845090630601,0,1.40398589056729,0,0.94007937463814,2.50634477090067,0.169291777801603,0.481764225311099,0.201799707191048,1.27753871307098,0.343505344755765,0,0,0,0.19538809540204,0.556812347790485,0,1.89318974933188,1.99843180798692,4.22961015263549,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0.994147647766298,0.140669416410513,0,0.494411622680279,0,0.19924798825107,5.8019622261541,0,0,0.492339221844278,0,0.0898683511473268,0,3.06943422136123,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.384751292518985,0,0,0,0,0,0,0,5.10966490978682,0.31396051279005,1.82832850090172,0,0,0,0,1.58936578980379,0,0,0,0,0,1.06149077404007,0,0.593042257361244,1.48276726735803,1.67075119208729,0.067401132980677,0,0.234264445725339,0,0,0,0,3.62972148145992,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,1.28071796843612,0,0,0,0,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0.273810757783986,0,0,2.89176089707246,0,0,0.717873024576814,0.199679000498991,0,0.223171457441873,0.201550417460179,0,0,0,0,0,0,0.677386656526276,0,0.1362034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| |||
|short_description=p7@TNFRSF14 | |||
}} |
Revision as of 15:56, 10 January 2014
Short description: | p7@TNFRSF14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TNFRSF14_5end |
Coexpression cluster: | C3607_Dendritic_CD8_CD4_Macrophage_Monocytederived_chronic_Melanocyte |
Association with transcript: | -14bp_to_ENST00000409119_5end |
EntrezGene: | TNFRSF14 |
HGNC: | 11912 |
UniProt: | B9A034 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.58e-52 | 98 |
blood island | 2.58e-52 | 98 |
hemolymphoid system | 2.50e-48 | 108 |
bone marrow | 1.55e-43 | 76 |
immune system | 2.70e-42 | 93 |
bone element | 6.54e-39 | 82 |
skeletal element | 1.00e-33 | 90 |
skeletal system | 1.92e-28 | 100 |
connective tissue | 4.36e-17 | 371 |
lateral plate mesoderm | 6.40e-15 | 203 |
musculoskeletal system | 3.70e-10 | 167 |