FFCP PHASE1:Hg19::chr1:1563024..1563050,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=142678 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30577 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=122bp_to_ENST00000464570_5end | |||
|description=CAGE_peak_10_at_MIB2_5end | |||
|id=chr1:1563024..1563050,+ | |||
|ontology_enrichment_celltype=CL:0002076!4.20e-16!43;CL:0000066!9.99e-16!254;CL:0002251!5.58e-13!21;CL:0000223!2.15e-11!59;CL:0002368!2.14e-10!13;CL:0000244!7.75e-10!4;CL:0000731!7.75e-10!4;CL:0002202!2.07e-09!9;CL:0002632!2.07e-09!9;CL:0002328!3.42e-08!3;CL:0002150!4.23e-08!3;CL:0000861!4.23e-08!3;CL:0000068!4.53e-08!3;CL:0000069!4.53e-08!3;CL:0000307!4.53e-08!3;CL:0000377!4.53e-08!3;CL:0002621!1.33e-07!3;CL:0002178!3.29e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002202;1.97e-17;9!CL:0002632;1.97e-17;9!CL:0000244;2.61e-17;4!CL:0000731;2.61e-17;4!CL:0000307;3.84e-14;3!CL:0002328;4.59e-14;3!CL:0002621;4.53e-13;3!CL:0002368;7.05e-12;13!CL:0002159;4.61e-11;14!CL:0002076;9.35e-11;42!CL:0000575;3.05e-10;2!CL:0002251;8.90e-10;20!CL:0000312;8.28e-09;5!CL:0000362;4.11e-08;9!CL:0000240;2.09e-07;6!CL:0000311;2.09e-07;6!CL:0000079;2.09e-07;6!CL:0000237;2.09e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,1.91e-17,9;CL:0002632,1.91e-17,9;CL:0000244,2.29e-17,4;CL:0000731,2.29e-17,4;CL:0000066,4.59e-16,253;CL:0002076,6.92e-15,42;CL:0002328,3.15e-14,3;CL:0000068,5.38e-14,3;CL:0000069,5.38e-14,3;CL:0000307,5.38e-14,3;CL:0000377,5.38e-14,3;CL:0002621,4.17e-13,3;CL:0002368,6.92e-12,13;CL:0002159,4.79e-11,14;CL:0000076,7.55e-11,63;CL:0000575,3.20e-10,2;CL:0000223,5.10e-10,58;CL:0002251,8.97e-10,20;CL:0000312,7.65e-09,5;CL:0000362,4.19e-08,9;CL:0000240,1.96e-07,6;CL:0000311,1.96e-07,6;CL:0000079,1.96e-07,6;CL:0000237,1.96e-07,6;CL:0000036,1.96e-07,6;CL:0000357,1.96e-07,6;CL:0000114,1.96e-07,6;CL:0002077,3.59e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000377;3.84e-14;3!UBERON:0008814;9.38e-10;2!UBERON:0010056;9.38e-10;2!CL:0000357;2.09e-07;6!CL:0000114;2.09e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!6.27e-15!14;DOID:305!1.01e-10!106;DOID:0050687!6.85e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.91e-19;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.22e-19,14;DOID:305,3.13e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.79e-13!169;UBERON:0000925!3.79e-13!169;UBERON:0006595!3.79e-13!169;UBERON:0000365!1.59e-11!5;UBERON:0001007!5.09e-10!155;UBERON:0001555!5.09e-10!155;UBERON:0007026!5.09e-10!155;UBERON:0005910!1.58e-09!6;UBERON:0001004!2.17e-09!72;UBERON:0000344!9.60e-09!12;UBERON:0004815!3.42e-08!3;UBERON:0002031!3.42e-08!3;UBERON:0000065!5.39e-08!53;UBERON:0003729!7.31e-08!5;UBERON:0000161!8.22e-08!35;UBERON:0004921!8.65e-08!129;UBERON:0004185!8.65e-08!129;UBERON:0001723!9.47e-08!3;UBERON:0001033!9.47e-08!3;UBERON:0010056!9.47e-08!3;UBERON:0001949!1.33e-07!3;UBERON:0007196!1.50e-07!14;UBERON:0001558!1.50e-07!14;UBERON:0000072!1.63e-07!46;UBERON:0000166!2.05e-07!21;UBERON:0005178!4.87e-07!34;UBERON:0002224!4.87e-07!34;UBERON:0005181!9.21e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;2.45e-16;12!UBERON:0004815;4.59e-14;3!UBERON:0002031;4.59e-14;3!UBERON:0000365;6.99e-14;5!UBERON:0001949;4.53e-13;3!UBERON:0000344;1.16e-12;20!UBERON:0000974;7.31e-12;6!UBERON:0005910;1.37e-11;6!UBERON:0003729;2.34e-11;13!UBERON:0003343;1.37e-10;4!UBERON:0004785;1.37e-10;4!UBERON:0007196;3.29e-10;15!UBERON:0001558;3.29e-10;15!UBERON:0000161;3.95e-10;19!UBERON:0000166;3.95e-10;19!UBERON:0002185;1.28e-08;5!UBERON:0000165;1.45e-08;28!UBERON:0005911;4.15e-08;36!UBERON:0001723;9.06e-07;3!UBERON:0001033;9.06e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,3.15e-14,3;UBERON:0002031,3.15e-14,3;UBERON:0000365,6.32e-14,5;UBERON:0001949,4.17e-13,3;UBERON:0000344,1.11e-12,20;UBERON:0005910,1.26e-11,6;UBERON:0003729,2.38e-11,13;UBERON:0000166,2.87e-11,22;UBERON:0003343,1.52e-10,4;UBERON:0004785,1.52e-10,4;UBERON:0007196,3.24e-10,15;UBERON:0001558,3.24e-10,15;UBERON:0002185,1.02e-08,5;UBERON:0001004,1.73e-08,74;UBERON:0000165,2.98e-08,29;UBERON:0000930,2.98e-08,29;UBERON:0004119,4.46e-07,160;UBERON:0000925,4.46e-07,160;UBERON:0006595,4.46e-07,160;UBERON:0000974,4.50e-07,10;UBERON:0001444,5.16e-07,49;UBERON:0001723,8.06e-07,3;UBERON:0001033,8.06e-07,3;UBERON:0010056,8.06e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,1.83884244895785,3.614471025339,5.17655614233503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27865759463288,4.44941331341315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,1.93260853163297,1.09098448236334,1.43402297694502,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,1.75600456653801,12.3641928583382,6.33332526193274,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27155183266741,2.01090682660736,3.26672954583968,0,2.15252686335615,1.68471475667626,2.21715076768338,1.83778720165568,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0.929015875628594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0.33307196799782,0,5.23993513143015,0,0,0,0,2.14870036263921,0,2.45728561679386,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.295930216910801,0,0,0,0,0,0,0,0,3.64139034513599,0,0.945550727071745,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0.230850775511391,0,0,0.0897576444097721,0.108647371922008,0.957003479195758,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2490496767972,0.0870592065804026,0,0,2.99944626996164,2.92357268344742,3.20250282507516,3.39461557709468,0,0,0,0,0,0,0.320635281006135,0,0.19980960958213,0.144090417154106,0,0,0,0,2.59263438078475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6428117273477,0,1.34173875039706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,3.557009374163,0,3.19170628885091,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.157912265028,0,0,0,0,0,4.47614424702222,1.24415452006595,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,7.45922660607795,0,1.10057159113007,2.77261598760812,0,0,0,0,0,0,0,0,1.18284868973636,0,0,0,0,0,0,0.496211178389294,0.175871244359621,0.511049710558381,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.47791541860604,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,7.1421575442263,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,1.0661699095049,0,0,0,0,0,0,2.8303177226605,0.684466602170562,1.81850543139386,0.502055437748735,0,0.244209805832924,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p10@MIB2 | |||
}} |
Revision as of 15:49, 10 January 2014
Short description: | p10@MIB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_MIB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 122bp_to_ENST00000464570_5end |
EntrezGene: | MIB2 |
HGNC: | 30577 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 1.91e-17 | 9 |
epithelial cell of lower respiratory tract | 1.91e-17 | 9 |
transitional epithelial cell | 2.29e-17 | 4 |
urothelial cell | 2.29e-17 | 4 |
epithelial cell | 4.59e-16 | 253 |
endo-epithelial cell | 6.92e-15 | 42 |
bronchial epithelial cell | 3.15e-14 | 3 |
duct epithelial cell | 5.38e-14 | 3 |
branched duct epithelial cell | 5.38e-14 | 3 |
tracheal epithelial cell | 5.38e-14 | 3 |
tracheoblast | 5.38e-14 | 3 |
gingival epithelial cell | 4.17e-13 | 3 |
respiratory epithelial cell | 6.92e-12 | 13 |
general ecto-epithelial cell | 4.79e-11 | 14 |
squamous epithelial cell | 7.55e-11 | 63 |
corneal epithelial cell | 3.20e-10 | 2 |
endodermal cell | 5.10e-10 | 58 |
epithelial cell of alimentary canal | 8.97e-10 | 20 |
keratinocyte | 7.65e-09 | 5 |
epidermal cell | 4.19e-08 | 9 |
stratified squamous epithelial cell | 1.96e-07 | 6 |
keratin accumulating cell | 1.96e-07 | 6 |
stratified epithelial cell | 1.96e-07 | 6 |
keratinizing barrier epithelial cell | 1.96e-07 | 6 |
epithelial fate stem cell | 1.96e-07 | 6 |
stratified epithelial stem cell | 1.96e-07 | 6 |
surface ectodermal cell | 1.96e-07 | 6 |
ecto-epithelial cell | 3.59e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 3.15e-14 | 3 |
epithelium of bronchus | 3.15e-14 | 3 |
urothelium | 6.32e-14 | 5 |
gingival epithelium | 4.17e-13 | 3 |
mucosa | 1.11e-12 | 20 |
transitional epithelium | 1.26e-11 | 6 |
mouth mucosa | 2.38e-11 | 13 |
oral opening | 2.87e-11 | 22 |
mucosa of oral region | 1.52e-10 | 4 |
respiratory system mucosa | 1.52e-10 | 4 |
tracheobronchial tree | 3.24e-10 | 15 |
lower respiratory tract | 3.24e-10 | 15 |
bronchus | 1.02e-08 | 5 |
respiratory system | 1.73e-08 | 74 |
mouth | 2.98e-08 | 29 |
stomodeum | 2.98e-08 | 29 |
endoderm-derived structure | 4.46e-07 | 160 |
endoderm | 4.46e-07 | 160 |
presumptive endoderm | 4.46e-07 | 160 |
neck | 4.50e-07 | 10 |
subdivision of head | 5.16e-07 | 49 |
tongue | 8.06e-07 | 3 |
gustatory system | 8.06e-07 | 3 |
future tongue | 8.06e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.22e-19 | 14 |
carcinoma | 3.13e-07 | 106 |