FFCP PHASE1:Hg19::chr1:1550858..1550927,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=142678 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30577 | |||
|TSSclassifier=strong | |||
|UniProt=D6RHY5,D6RDI1 | |||
|association_with_transcript=0bp_to_ENST00000477990,ENST00000489635,ENST00000511502,ENST00000514363,uc001agg.2,uc001agh.2,uc001agi.2,uc001agj.2,uc001agk.2_5end | |||
|description=CAGE_peak_3_at_MIB2_5end | |||
|id=chr1:1550858..1550927,+ | |||
|ontology_enrichment_celltype=CL:0000359!1.15e-08!32;CL:0000048!1.25e-08!430;CL:0000723!4.01e-08!436;CL:0000192!7.76e-08!42;CL:0000514!7.76e-08!42;CL:0000034!1.93e-07!444;CL:0000055!2.73e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.26e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,6.05e-09,427;CL:0000359,1.14e-08,32;CL:0000723,2.00e-08,433;CL:0000034,1.00e-07,441;CL:0000192,1.12e-07,43;CL:0000514,1.12e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004573!7.57e-09!33;UBERON:0004571!7.57e-09!33;UBERON:0001637!2.15e-08!42;UBERON:0003509!2.15e-08!42;UBERON:0004572!2.15e-08!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.18e-08;33!UBERON:0004571;3.18e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,7.51e-09,33;UBERON:0004571,7.51e-09,33;UBERON:0001637,2.13e-08,42;UBERON:0003509,2.13e-08,42;UBERON:0004572,2.13e-08,42 | |||
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| |||
|short_description=p3@MIB2 | |||
}} |
Revision as of 15:49, 10 January 2014
Short description: | p3@MIB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MIB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000477990, ENST00000489635, ENST00000511502, ENST00000514363, uc001agg.2, uc001agh.2, uc001agi.2, uc001agj.2, uc001agk.2_5end |
EntrezGene: | MIB2 |
HGNC: | 30577 |
UniProt: | D6RHY5D6RDI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 6.05e-09 | 427 |
vascular associated smooth muscle cell | 1.14e-08 | 32 |
somatic stem cell | 2.00e-08 | 433 |
stem cell | 1.00e-07 | 441 |
smooth muscle cell | 1.12e-07 | 43 |
smooth muscle myoblast | 1.12e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 7.51e-09 | 33 |
systemic arterial system | 7.51e-09 | 33 |
artery | 2.13e-08 | 42 |
arterial blood vessel | 2.13e-08 | 42 |
arterial system | 2.13e-08 | 42 |