FFCP PHASE1:Hg19::chr1:1167419..1167430,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51150 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24188 | |||
|TSSclassifier=strong | |||
|UniProt=G3V1E2 | |||
|association_with_transcript=-8bp_to_ENST00000263741,ENST00000465727_5end | |||
|description=CAGE_peak_3_at_SDF4_5end | |||
|id=chr1:1167419..1167430,- | |||
|ontology_enrichment_celltype=CL:0000548!1.45e-25!679;CL:0000004!1.45e-25!679;CL:0000255!1.45e-25!679;CL:0000012!8.05e-25!682;CL:0000220!1.66e-24!246;CL:0002321!1.82e-23!248;CL:0000055!3.15e-22!180;CL:0000144!6.80e-19!625;CL:0000222!7.26e-19!119;CL:0002371!7.76e-18!591;CL:0000066!8.13e-17!254;CL:0000192!2.47e-14!42;CL:0000514!2.47e-14!42;CL:0000183!3.52e-13!59;CL:0000359!9.40e-13!32;CL:0000680!3.03e-12!57;CL:0000056!3.03e-12!57;CL:0000355!3.03e-12!57;CL:0000187!8.45e-12!54;CL:0000003!1.87e-10!722;CL:0000393!1.70e-09!60;CL:0000211!1.70e-09!60;CL:0000057!2.42e-09!75;CL:0000063!3.34e-09!578;CL:0002078!9.88e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.99e-12;32!CL:0000192;2.02e-10;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.47e-23,250;CL:0000222,6.30e-19,121;CL:0000066,4.41e-17,253;CL:0000192,7.50e-14,43;CL:0000514,7.50e-14,43;CL:0000359,8.70e-13,32;CL:0000680,5.34e-12,58;CL:0000056,5.34e-12,58;CL:0000355,5.34e-12,58;CL:0000187,1.51e-11,55;CL:0000057,2.16e-09,76;CL:0000393,2.61e-09,61;CL:0000211,2.61e-09,61;CL:0002078,6.05e-07,45;CL:0000213,6.45e-07,58;CL:0000215,6.45e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;2.02e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.51e-22!216;UBERON:0003914!2.12e-20!118;UBERON:0005256!6.27e-20!143;UBERON:0000490!4.99e-18!138;UBERON:0001637!1.08e-17!42;UBERON:0003509!1.08e-17!42;UBERON:0004572!1.08e-17!42;UBERON:0003104!8.03e-17!238;UBERON:0009142!8.03e-17!238;UBERON:0000055!3.37e-16!69;UBERON:0002049!1.47e-15!79;UBERON:0007798!1.47e-15!79;UBERON:0001981!4.39e-15!60;UBERON:0007500!4.39e-15!60;UBERON:0004537!4.39e-15!60;UBERON:0006965!4.39e-15!60;UBERON:0004872!2.16e-14!84;UBERON:0004573!3.72e-14!33;UBERON:0004571!3.72e-14!33;UBERON:0000486!1.48e-13!82;UBERON:0000926!2.65e-12!448;UBERON:0004120!2.65e-12!448;UBERON:0006603!2.65e-12!448;UBERON:0004290!2.82e-12!70;UBERON:0000914!4.13e-12!83;UBERON:0002329!4.13e-12!83;UBERON:0003077!4.13e-12!83;UBERON:0003059!4.13e-12!83;UBERON:0007282!4.13e-12!83;UBERON:0009618!4.13e-12!83;UBERON:0007285!4.13e-12!83;UBERON:0009569!1.23e-11!113;UBERON:0001134!5.80e-11!61;UBERON:0002036!5.80e-11!61;UBERON:0003082!5.80e-11!61;UBERON:0002385!3.37e-10!63;UBERON:0001015!3.37e-10!63;UBERON:0000383!3.37e-10!63;UBERON:0004535!7.99e-10!110;UBERON:0001009!1.93e-09!113;UBERON:0000119!3.23e-09!312;UBERON:0000483!5.27e-09!309;UBERON:0002417!5.91e-09!61;UBERON:0000916!5.91e-09!61;UBERON:0000475!2.30e-08!365;UBERON:0006554!5.78e-08!44;UBERON:0001008!1.12e-07!45;UBERON:0000947!1.31e-07!21;UBERON:0010191!1.31e-07!21;UBERON:0000481!2.21e-07!347;UBERON:0000466!2.73e-07!126;UBERON:0005172!4.84e-07!55;UBERON:0005173!4.84e-07!55;UBERON:0003102!5.85e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.01e-13;42!UBERON:0003509;4.01e-13;42!UBERON:0004572;4.01e-13;42!UBERON:0004573;6.29e-13;33!UBERON:0004571;6.29e-13;33!UBERON:0007500;4.20e-10;56!UBERON:0001981;4.20e-10;56!UBERON:0004537;4.20e-10;56!UBERON:0003914;2.28e-09;74!UBERON:0000055;3.95e-09;65!UBERON:0000947;1.48e-07;21!UBERON:0010191;1.48e-07;21!UBERON:0002049;5.10e-07;75!UBERON:0007798;5.10e-07;75 | |||
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| |||
|short_description=p3@SDF4 | |||
}} |
Revision as of 15:45, 10 January 2014
Short description: | p3@SDF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SDF4_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENST00000263741, ENST00000465727_5end |
EntrezGene: | SDF4 |
HGNC: | 24188 |
UniProt: | G3V1E2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.47e-23 | 250 |
mesodermal cell | 6.30e-19 | 121 |
epithelial cell | 4.41e-17 | 253 |
smooth muscle cell | 7.50e-14 | 43 |
smooth muscle myoblast | 7.50e-14 | 43 |
vascular associated smooth muscle cell | 8.70e-13 | 32 |
muscle precursor cell | 5.34e-12 | 58 |
myoblast | 5.34e-12 | 58 |
multi-potent skeletal muscle stem cell | 5.34e-12 | 58 |
muscle cell | 1.51e-11 | 55 |
fibroblast | 2.16e-09 | 76 |
electrically responsive cell | 2.61e-09 | 61 |
electrically active cell | 2.61e-09 | 61 |
meso-epithelial cell | 6.05e-07 | 45 |
lining cell | 6.45e-07 | 58 |
barrier cell | 6.45e-07 | 58 |