FFCP PHASE1:Hg19::chr1:859450..859476,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2602 | |||
|description=CAGE_peak_at_chr1:859450..859476,+ | |||
|id=chr1:859450..859476,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002334;8.08e-08;12!CL:0002615;1.20e-07;3!CL:0002580;5.20e-07;3!CL:0002579;9.42e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.25e-08,15;CL:0002334,7.91e-08,12;CL:0002615,1.43e-07,3;CL:0002580,4.34e-07,3;CL:0000057,7.88e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;1.16e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.31e-07,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;9.89e-13;6!UBERON:0002358;9.89e-13;6!UBERON:0003684;9.89e-13;6!UBERON:0001178;9.89e-13;6!UBERON:0004457;5.10e-11;9!UBERON:0000042;5.10e-11;9!UBERON:0000310;2.11e-09;10!UBERON:0001443;1.94e-08;11!UBERON:0000966;3.88e-07;5!UBERON:0005388;3.88e-07;5!UBERON:0001802;3.88e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.34e-12,6;UBERON:0002358,1.34e-12,6;UBERON:0003684,1.34e-12,6;UBERON:0001178,1.34e-12,6;UBERON:0000310,2.13e-09,10;UBERON:0001443,1.95e-08,11;UBERON:0004457,6.54e-08,12;UBERON:0000042,6.54e-08,12 | |||
|phase1_expression=3.63356758541113,3.21150785836475,3.66481450649525,8.00586386825043,2.23480547213644,4.36169262050184,0,0,0,0.491467873003018,0,0,0,0,0.331397375727916,0,0,0,0,1.23121058076788,1.22400414746552,0.940364164434263,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28685314316103,2.24203425192614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,1.0843174571537,0,2.462390822334,0,1.94653948121054,0.378139268656271,1.10864698731282,1.05401742831751,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0.709336764396714,0.560677600142307,0,0,0,0,0,0,4.60940739583999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0.438977620880838,0,0,0,2.87023417102179,0.213557388818567,0,4.80145753735044,0,2.31876486041066,0.37223371266318,5.90717162844432,3.50773218580315,1.00973509697646,0,0,3.90510551768276,3.72782763442269,1.52604533079439,0,0,0,0.243947412259191,0,0.232387885739037,0.414644220061482,0,0,0,2.57296375277154,1.38134921352481,0,0,0.473227200159376,0.505754070234305,0.482022059766964,0.110293972732394,0.435758888184812,0.237270619111097,0.269662616320329,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.231860809950154,0.587043471179108,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74384027533312,0,0.129271715757778,3.57656445851882,0,1.06375246633948,0,0.771622122786426,0,0.532844358032199,1.57275793023962,0.542621605391443,0,0,1.42156779497018,0,0.602878754119172,0,0.899756920638513,0,0,0,0,0,0,0,0.205476322550383,0.716243852959582,0,0,0,0,0.76228387266739,0,0.773288812777695,0.167516265334349,1.91381625495949,0,0,0,0.12269149171914,0,0,0.415941723061614,0.356857977594324,0.315404830067869,0,0,0,0,0.664225598535437,0.921845842708516,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,1.73675465473144,4.29693525206575,2.52594084989766,2.94720043288112,1.02341449813341,2.57366273829772,7.42090332224955,0,0.532685175939381,0,0,0.348631135379878,0.120859449591622,0,0,0.229628896329213,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,4.62681758070868,1.62567862526312,3.01013864312912,0,0,0,0,0,0.512900250232778,8.85639543389205,2.60302715731442,0.103041011647722,4.8531816353722,4.95056999523528,0,0,0,0.580024309752732,0.924291702687866,0.767518373630648,0,0.429680979473094,0.435050081742686,0.255679882248303,0.890320356467374,0,0,0,0,0.464845549297286,0,2.7881490806424,0,0,0,0,0.143124886741991,0,0,0.38126038784765,0,0,0.318203247925937,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0,0,0,0.565621727814851,0,2.2054613741845,0.66343897524122,0,0,0,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5548516986286,0,0,0,0,0,0.797131363644112,0,0,0,0.324621940274555,0.280797178113459,0,0,2.50634477090067,0.169291777801603,0,0,0,0.343505344755765,0,0.223676107892416,0.667396566847634,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,1.19548792950642,0.276283915531148,1.51159648712566,0.20453736500431,0,0,0,0,0,0.295930216910801,0,0,0,0.185536196323703,0,1.5625665665114,1.22443999994674,0,0,0.254253650292766,0,0.689486746482929,1.45802306691627,0.520874984799877,0,0.120596438625408,0,0,0,0,0.980446171670911,0.557694977114413,0.307801034015188,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0,0,0.37950746544837,0,0,0,0,0.216388639742091,0,0.265372693510018,0,0,0.247127877893006,0.104421949505455,0.67401132980677,0,0,0,0,0,0,0,0,1.0741718536843,0.60129367765797,4.04383946449264,0,0,0,0,0,0,0,0,0,0,0,1.25783230675811,1.24251839046515,0.903270027585302,0.193978032976839,0,0.451961481561065,0,0,0.253243183823515,0.195551382734803,0,0,2.39771531498556,0,0.343609788497747,0.171594997861965,0,0.372757606696298,0.471388069233591,0.135904206073614,0.209205692624666,2.75395187618069,1.44475294950759,0,0.410716136675979,0,0,0,0.279282401272254,0,0,0,0,0,0.53746777989381,0,0,0,0,0,0.492137407573744,0,0.795229689809303,0.544813624446302,0,0,0,0,0,0,0,0.236417121897595,5.4552771660398,0,0,0,0.714695326373367,0,0.76280561296425,0,1.72844298240254,0,0,0,0.170388021785422,1.81299346432201,0.293104467356165,0,0.258565912723101,0.26446520348538,0.171086837884329,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.221858103073705,0.620964029413834,1.38348634936231,0,0,0,0,0,5.94176217304383,0.597019211547496,1.63599316893057,0,0,0,0,0,0,1.86524640699337,0,0.159296767163702,0,0,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0,2.40376993627955,2.69399591012735,1.26184898228651,0,0,0.521988583930423,2.26705925512272,0.463044948647668,0,0.895444205407437,0.308801447160972,1.97355644620836,0.176689145945881,0.192914038270915,1.18259708457151,3.5873812602312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| |||
|short_description=p@chr1:859450..859476,+ | |||
}} |
Revision as of 15:40, 10 January 2014
Short description: | p@chr1:859450..859476, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:859450..859476, + |
Coexpression cluster: | C2602_Fibroblast_merkel_neuroectodermal_neuroepithelioma_Retinal_Preadipocyte_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.25e-08 | 15 |
preadipocyte | 7.91e-08 | 12 |
adipocyte of omentum tissue | 1.43e-07 | 3 |
preadipocyte of the breast | 4.34e-07 | 3 |
fibroblast | 7.88e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.34e-12 | 6 |
peritoneum | 1.34e-12 | 6 |
abdominal cavity | 1.34e-12 | 6 |
visceral peritoneum | 1.34e-12 | 6 |
breast | 2.13e-09 | 10 |
chest | 1.95e-08 | 11 |
cavity lining | 6.54e-08 | 12 |
serous membrane | 6.54e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.31e-07 | 10 |