Browse Transcription Factors hg19: Difference between revisions
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Human transcription factors | {{#vardefine:geneids_content|{{#ask:[[Category:EntrezGene]][[tax_id::9606]][[tf?::true]] | ||
|?GeneID | |||
|?Symbol | |||
|?Description | |||
|format=array | |||
|headers=hide | |||
|sort=Symbol | |||
|order=DESC | |||
|mainlabel=- | |||
|sep=: | |||
|propsep=/ | |||
|limit= | |||
|manysep=<MANY> | |||
|recordsep=<RCRD> | |||
}} | |||
}} | |||
{{#vardefine:db_content}} | |||
{{#arraydefine:geneids_array|{{#var:geneids_content}}|:}} | |||
{{ | |||
#loop: j | |||
| 0 | |||
| {{#arraysize:geneids_array}} | |||
| <nowiki/> | |||
{{#vardefine:ID|{{#explode:{{#arrayindex:geneids_array| {{#var:j}} }}|/|0 }} }} | |||
{{#vardefine:Symbol|{{#explode:{{#arrayindex:geneids_array| {{#var:j}} }}|/|1 }} }} | |||
{{#vardefine:Description|{{#explode:{{#arrayindex:geneids_array| {{#var:j}} }}|/|2 }} }} | |||
{{#vardefine:PeakCount|{{#ask: [[Category:FFCP]][[EntrezGene::{{#var:ID}}]]|format=count}}}} | |||
{{#arraydefine: defined_array{{#var:j}} |{{#var:ID}}/{{#var:Symbol}}/{{#var:Description}}/{{#var:PeakCount}}}} | |||
{{#vardefine:db_content|{{#arrayprint:defined_array{{#var:j}} }}:{{#var:db_content}} }} | |||
}} | |||
==Human transcription factors== | |||
<div class="toccolours mw-collapsible" style="width:auto">Peak counts && transcription factors graph overview | |||
<div class="mw-collapsible-content"> | |||
{{PeakCountPerSample|{{#var:db_content}}|||:|/|TF Factors and CAGE peak counts graph|Source: FANTOM5 Project,RIKEN DGT||Peak Counts}} | |||
</div> | |||
</div> | |||
<html> | <html> | ||
<style type="text/css" title="currentStyle"> | <style type="text/css" title="currentStyle"> | ||
@import "/resource_browser/rb_js/datatables/media/css/jquery.dataTables.css"; | @import "/resource_browser/rb_js/datatables/media/css/jquery.dataTables.css"; | ||
</style> | </style> | ||
<script type="text/javascript" src="/resource_browser/rb_js/datatables/media/js/jquery.dataTables.min.js"></script> | <script type="text/javascript" src="/resource_browser/rb_js/datatables/media/js/jquery.dataTables.min.js"></script> | ||
<script type="text/javascript" language="javascript" src="/resource_browser/rb_js/datatables/extras/TableTools/media/js/TableTools.min.js"></script> | <script type="text/javascript" language="javascript" src="/resource_browser/rb_js/datatables/extras/TableTools/media/js/TableTools.min.js"></script> | ||
<style type="text/css" title="currentStyle"> | |||
@import "/resource_browser/rb_js/datatables/media/css/jquery.dataTables.css"; | |||
@import "/resource_browser/rb_js/datatables/extras/TableTools/media/css/TableTools.css"; | |||
</style> | |||
<script type="text/javascript"> | <script type="text/javascript"> | ||
var content = ""; | |||
var m_data = {}; | |||
m_data.content = []; | |||
$(document).ready(function() { | $(document).ready(function() { | ||
var oTable = $(' | content= "</html>{{#var:db_content}}<html>"; | ||
var content_array = content.split(":"); | |||
"aaSorting": [[1, "asc"]], | for(i=0;i<content_array.length-1;i++){ | ||
var temp = content_array[i]; | |||
var temp_array =temp.split("/"); | |||
m_data.content.push({EntrezGene:'<a href=https://fantom5-collaboration.gsc.riken.jp/resource_browser/EntrezGene:'+temp_array[0]+'>'+temp_array[0]+'</a>', Symbol:temp_array[1],Description:temp_array[2],PeakCount:temp_array[3]}); | |||
} | |||
var oTable = $('#tf_table').dataTable( { | |||
"bProcessing": true, | |||
"iDisplayLength":25, | |||
"aLengthMenu": [[10, 25, 50, -1], [10, 25, 50, "All"]], | |||
"bScrollCollapse": true, | |||
"bPaginate": true, | |||
"bFilter": true, | |||
"bInfo": true, | |||
"bJQueryUI": true, | |||
"aaSorting": [[ 1, "asc" ]], | |||
"aaData": m_data.content, | |||
"aoColumns":[ | |||
{"mData": "EntrezGene","sTitle": "EntrezGene"}, | |||
{"mData": "Symbol","sTitle": "Symbol"}, | |||
{"mData": "Description","sTitle": "Description"}, | |||
{"mData": "PeakCount","sTitle": "Peak Count"} | |||
] | |||
} ); | } ); | ||
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$('#export_tool').before( oTableTools.dom.container ); | $('#export_tool').before( oTableTools.dom.container ); | ||
} ); | } ); | ||
</script> | </script> | ||
<span id="export_tool"></span> | <span id="export_tool"></span> | ||
</html> | </html> | ||
<table cellpadding="0" cellspacing="0" border="0" class="display" id="tf_table"> | |||
</table> |
Revision as of 14:24, 4 October 2013
Human transcription factors
Peak counts && transcription factors graph overview