FFCP PHASE1:Mm9::chrX:133371747..133371758,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=212|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:133371747..133371758,+|id=chrX:133371747..133371758,+|ontology_enrichment_celltype=CL:0000540!1.87e-07!33;CL:0000047!1.87e-07!33;CL:0000031!1.87e-07!33;CL:0000404!1.87e-07!33|ontology_enrichment_celltype_v019_2=CL:0002610,6.52e-09,3;CL:0002614,1.33e-08,3;CL:0000117,1.94e-07,23;CL:0000337,1.94e-07,23;CL:0000540,5.43e-07,33;CL:0000047,5.43e-07,33;CL:0000031,5.43e-07,33;CL:0000404,5.43e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.70e-22!75;UBERON:0001016!6.70e-22!75;UBERON:0001017!2.85e-20!73;UBERON:0005743!2.85e-20!73;UBERON:0004121!2.14e-19!102;UBERON:0000924!2.14e-19!102;UBERON:0006601!2.14e-19!102;UBERON:0002346!2.00e-15!71;UBERON:0003075!2.00e-15!71;UBERON:0007284!2.00e-15!71;UBERON:0000955!5.31e-15!50;UBERON:0006238!5.31e-15!50;UBERON:0001049!7.17e-15!52;UBERON:0005068!7.17e-15!52;UBERON:0006241!7.17e-15!52;UBERON:0007135!7.17e-15!52;UBERON:0000033!1.54e-14!63;UBERON:0002616!3.21e-14!49;UBERON:0002021!1.01e-12!10;UBERON:0000411!1.01e-12!10;UBERON:0001950!1.01e-12!10;UBERON:0002020!1.84e-11!34;UBERON:0002791!4.39e-09!29;UBERON:0003528!4.39e-09!29;UBERON:0001893!4.39e-09!29;UBERON:0003080!4.48e-09!40;UBERON:0003056!9.94e-09!49;UBERON:0002298!1.70e-08!6;UBERON:0002780!2.51e-08!39;UBERON:0001890!2.51e-08!39;UBERON:0006240!2.51e-08!39;UBERON:0007811!7.08e-08!86;UBERON:0002619!1.24e-07!17;UBERON:0003076!2.33e-07!12;UBERON:0003057!2.33e-07!12;UBERON:0000010!4.41e-07!11;UBERON:0000956!9.41e-07!21;UBERON:0001869!9.41e-07!21;UBERON:0000203!9.41e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.25e-34,54;UBERON:0001017,3.85e-32,73;UBERON:0001016,4.14e-31,75;UBERON:0001049,1.23e-30,52;UBERON:0005068,1.23e-30,52;UBERON:0006241,1.23e-30,52;UBERON:0007135,1.23e-30,52;UBERON:0002346,7.11e-28,64;UBERON:0003075,7.11e-28,64;UBERON:0007284,7.11e-28,64;UBERON:0000955,1.11e-26,47;UBERON:0006238,1.11e-26,47;UBERON:0002616,4.25e-25,46;UBERON:0004121,6.17e-25,95;UBERON:0000924,6.17e-25,95;UBERON:0006601,6.17e-25,95;UBERON:0002021,1.51e-24,10;UBERON:0000411,1.51e-24,10;UBERON:0001950,1.51e-24,10;UBERON:0010371,1.14e-23,73;UBERON:0002020,1.40e-22,34;UBERON:0003080,2.96e-19,40;UBERON:0003528,3.04e-19,29;UBERON:0002791,3.04e-19,29;UBERON:0001893,3.04e-19,29;UBERON:0002780,1.25e-17,39;UBERON:0001890,1.25e-17,39;UBERON:0006240,1.25e-17,39;UBERON:0010314,1.73e-17,92;UBERON:0003056,1.00e-16,49;UBERON:0002619,2.52e-16,17;UBERON:0000956,3.70e-15,21;UBERON:0001869,3.70e-15,21;UBERON:0000203,3.70e-15,21;UBERON:0003076,2.56e-12,12;UBERON:0003057,2.56e-12,12;UBERON:0000025,8.91e-12,114;UBERON:0002950,8.38e-11,4;UBERON:0001891,8.38e-11,4;UBERON:0009616,8.38e-11,4;UBERON:0010286,8.38e-11,4;UBERON:0004111,1.33e-10,122;UBERON:0004684,6.52e-09,3;UBERON:0002275,6.52e-09,3;UBERON:0011216,1.11e-08,194;UBERON:0002038,1.33e-08,3;UBERON:0009663,1.33e-08,3;UBERON:0009661,1.33e-08,3;UBERON:0000125,1.33e-08,3;UBERON:0002308,1.33e-08,3;UBERON:0004733,2.60e-07,6;UBERON:0004732,2.60e-07,6;UBERON:0002028,2.60e-07,6;UBERON:0007277,2.60e-07,6;UBERON:0000483,5.43e-07,174;UBERON:0000119,7.73e-07,176|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10434270475807,0,0,0,4.40463523997555,21.5791601363967,29.4924543851987,0,0,0,7.53794097303729,3.37657566019008,26.7396933609418,2.94628585473668,1.42371680799103,0.186399445825301,0.757261933331841,0.906858721281426,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0.352766121407114,0,0,0,0,0.161766849947409,0,0,0,4.39171195517321,6.0739544975902,0,0,0,0,4.79330046095433,4.57500602818627,0.125654352112864,2.25971616249959,7.41574826257959,10.5971902725376,21.7403292510795,0,0,0,0.631325567659422,0,0,0,0.150704817835715,0,0,0,4.65666067330228,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0.32833492815819,0.162137619091711,0,0.219550115291051,0.134206418760372,2.10289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87536413054709,0,0.312037673114561,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,8.50918126935297,29.7717683944196,0,0,0.315508219416257,0,1.29254038639679,1.67278158566786,0.891194696329576,0,0.809621403349789,0.584511715822624,0.790575555893047,1.28528526568723,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0,0,0,0,12.9797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0.337912250981556,0.234714477291508,0.39061315453185,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,6.7770221114048,6.90487854760765,13.7494923225455,9.10821866421544,11.6464028361009,11.3309084608455,4.72515750162264,5.40385443869065,2.26571204492102,4.14208249401456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354951612318675,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chrX:133371747..133371758,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=212 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:133371747..133371758,+ | |||
|id=chrX:133371747..133371758,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.87e-07!33;CL:0000047!1.87e-07!33;CL:0000031!1.87e-07!33;CL:0000404!1.87e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,6.52e-09,3;CL:0002614,1.33e-08,3;CL:0000117,1.94e-07,23;CL:0000337,1.94e-07,23;CL:0000540,5.43e-07,33;CL:0000047,5.43e-07,33;CL:0000031,5.43e-07,33;CL:0000404,5.43e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.70e-22!75;UBERON:0001016!6.70e-22!75;UBERON:0001017!2.85e-20!73;UBERON:0005743!2.85e-20!73;UBERON:0004121!2.14e-19!102;UBERON:0000924!2.14e-19!102;UBERON:0006601!2.14e-19!102;UBERON:0002346!2.00e-15!71;UBERON:0003075!2.00e-15!71;UBERON:0007284!2.00e-15!71;UBERON:0000955!5.31e-15!50;UBERON:0006238!5.31e-15!50;UBERON:0001049!7.17e-15!52;UBERON:0005068!7.17e-15!52;UBERON:0006241!7.17e-15!52;UBERON:0007135!7.17e-15!52;UBERON:0000033!1.54e-14!63;UBERON:0002616!3.21e-14!49;UBERON:0002021!1.01e-12!10;UBERON:0000411!1.01e-12!10;UBERON:0001950!1.01e-12!10;UBERON:0002020!1.84e-11!34;UBERON:0002791!4.39e-09!29;UBERON:0003528!4.39e-09!29;UBERON:0001893!4.39e-09!29;UBERON:0003080!4.48e-09!40;UBERON:0003056!9.94e-09!49;UBERON:0002298!1.70e-08!6;UBERON:0002780!2.51e-08!39;UBERON:0001890!2.51e-08!39;UBERON:0006240!2.51e-08!39;UBERON:0007811!7.08e-08!86;UBERON:0002619!1.24e-07!17;UBERON:0003076!2.33e-07!12;UBERON:0003057!2.33e-07!12;UBERON:0000010!4.41e-07!11;UBERON:0000956!9.41e-07!21;UBERON:0001869!9.41e-07!21;UBERON:0000203!9.41e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.25e-34,54;UBERON:0001017,3.85e-32,73;UBERON:0001016,4.14e-31,75;UBERON:0001049,1.23e-30,52;UBERON:0005068,1.23e-30,52;UBERON:0006241,1.23e-30,52;UBERON:0007135,1.23e-30,52;UBERON:0002346,7.11e-28,64;UBERON:0003075,7.11e-28,64;UBERON:0007284,7.11e-28,64;UBERON:0000955,1.11e-26,47;UBERON:0006238,1.11e-26,47;UBERON:0002616,4.25e-25,46;UBERON:0004121,6.17e-25,95;UBERON:0000924,6.17e-25,95;UBERON:0006601,6.17e-25,95;UBERON:0002021,1.51e-24,10;UBERON:0000411,1.51e-24,10;UBERON:0001950,1.51e-24,10;UBERON:0010371,1.14e-23,73;UBERON:0002020,1.40e-22,34;UBERON:0003080,2.96e-19,40;UBERON:0003528,3.04e-19,29;UBERON:0002791,3.04e-19,29;UBERON:0001893,3.04e-19,29;UBERON:0002780,1.25e-17,39;UBERON:0001890,1.25e-17,39;UBERON:0006240,1.25e-17,39;UBERON:0010314,1.73e-17,92;UBERON:0003056,1.00e-16,49;UBERON:0002619,2.52e-16,17;UBERON:0000956,3.70e-15,21;UBERON:0001869,3.70e-15,21;UBERON:0000203,3.70e-15,21;UBERON:0003076,2.56e-12,12;UBERON:0003057,2.56e-12,12;UBERON:0000025,8.91e-12,114;UBERON:0002950,8.38e-11,4;UBERON:0001891,8.38e-11,4;UBERON:0009616,8.38e-11,4;UBERON:0010286,8.38e-11,4;UBERON:0004111,1.33e-10,122;UBERON:0004684,6.52e-09,3;UBERON:0002275,6.52e-09,3;UBERON:0011216,1.11e-08,194;UBERON:0002038,1.33e-08,3;UBERON:0009663,1.33e-08,3;UBERON:0009661,1.33e-08,3;UBERON:0000125,1.33e-08,3;UBERON:0002308,1.33e-08,3;UBERON:0004733,2.60e-07,6;UBERON:0004732,2.60e-07,6;UBERON:0002028,2.60e-07,6;UBERON:0007277,2.60e-07,6;UBERON:0000483,5.43e-07,174;UBERON:0000119,7.73e-07,176 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10434270475807,0,0,0,4.40463523997555,21.5791601363967,29.4924543851987,0,0,0,7.53794097303729,3.37657566019008,26.7396933609418,2.94628585473668,1.42371680799103,0.186399445825301,0.757261933331841,0.906858721281426,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0.352766121407114,0,0,0,0,0.161766849947409,0,0,0,4.39171195517321,6.0739544975902,0,0,0,0,4.79330046095433,4.57500602818627,0.125654352112864,2.25971616249959,7.41574826257959,10.5971902725376,21.7403292510795,0,0,0,0.631325567659422,0,0,0,0.150704817835715,0,0,0,4.65666067330228,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0.32833492815819,0.162137619091711,0,0.219550115291051,0.134206418760372,2.10289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87536413054709,0,0.312037673114561,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,8.50918126935297,29.7717683944196,0,0,0.315508219416257,0,1.29254038639679,1.67278158566786,0.891194696329576,0,0.809621403349789,0.584511715822624,0.790575555893047,1.28528526568723,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0,0,0,0,12.9797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0.337912250981556,0.234714477291508,0.39061315453185,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,6.7770221114048,6.90487854760765,13.7494923225455,9.10821866421544,11.6464028361009,11.3309084608455,4.72515750162264,5.40385443869065,2.26571204492102,4.14208249401456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354951612318675,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chrX:133371747..133371758,+ | |||
}} |
Revision as of 19:21, 14 September 2013
Short description: | p@chrX:133371747..133371758, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:133371747..133371758, + |
Coexpression cluster: | MCL_coexpression_mm9:212 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 6.52e-09 | 3 |
neuron of the substantia nigra | 1.33e-08 | 3 |
CNS neuron (sensu Vertebrata) | 1.94e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.94e-07 | 23 |
neuron | 5.43e-07 | 33 |
neuronal stem cell | 5.43e-07 | 33 |
neuroblast | 5.43e-07 | 33 |
electrically signaling cell | 5.43e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.