Personal tools

FFCP PHASE1:Mm9::chr9:69137672..69137702,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=19883|HGNC=|MCL_coexpression_id=2501|UniProt=|association_with_transcript=12bp_to_uc009qna.1,uc012gwh.1_5end|description=CAGE_peak_2_at_Rora_5end|id=chr9:69137672..69137702,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.54e-08!51;UBERON:0000475!1.50e-07!200;UBERON:0004111!4.84e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.88e-08,51;UBERON:0004111,9.82e-07,122|phase1_expression=3.68342348341026,0,0.454999239389536,0,0,0.16787927191189,0.233612640595526,7.48915275961142,9.99599927276834,19.4273556847255,5.47897498321616,8.69516533049167,3.59521532855532,4.28359971853087,0.999329285446988,0.607425802169478,0,0.630924330716475,0.548457734422955,0,8.67441559540912,0.297872853602656,0,0.47997726838022,0.22940928106717,0,0,0,0.380046838912748,0.252030129759931,0.665191531965914,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,9.06457089424156,7.70464677268311,2.0190142737785,0,1.30815093828268,0.439372365468944,2.13872888981712,0.55994568650145,0,0.167782606057736,5.07753499407941,7.39406358113421,5.91696702882678,9.16907007804022,6.18806510732931,0.404632921719196,0.528990979272033,1.26766280701236,0.338844532069132,0,2.2497492932035,0.988866362566974,2.1314403448383,1.49800055259202,1.15265491596466,0.414758449233911,0,0,1.42825492201902,0.220868540951614,0.122490799214954,0.287536413054709,0.919218786610021,24.2254938198655,35.369392649597,32.1037654505549,1.97829431595291,0.914876436024097,2.6045668527838,5.58365998002762,7.31591393041184,7.94550888439413,1.47314292736834,3.13217697758026,0.186399445825301,1.8931548333296,1.13357340160178,15.0729534124872,12.0459342777394,6.79971333707751,14.5719861742211,10.3964226791627,12.0967259516281,10.8142203501449,2.55645483867087,2.07828803682295,1.06001872353102,2.67602497575693,14.115912515575,7.64415719119937,0,1.29894624606728,0.760079596425296,1.01104889002957,14.1588010851634,3.36619248741323,13.8051189330287,2.4287945747259,3.34912026143355,7.37969591219387,9.3448037142626,10.7005723493491,11.9383261763192,9.39340877390621,10.7003524120735,1.76922110389975,4.85300549842228,6.8460870722722,3.87900202508178,13.0474232852686,23.1296829639122,23.0391377494801,2.81002760729451,5.03223522924865,3.59941638596045,3.93917703926501,13.0317856282196,6.40500843946077,0.753926112677186,13.9059456153821,16.3657892691412,29.298114282898,21.9025705141473,2.03678727700633,5.22509276562391,4.29628689337247,25.6739064181498,1.17108398666433,1.14951052216736,2.70093194708024,3.16480117455002,6.32739442107349,5.38077625196369,7.58983968933804,25.3529303324235,0.646703978798527,0,0.527853372491847,0.657587197282725,3.33656699070717,16.716103993064,14.1989674121481,0.59710280045548,2.1066395619397,2.05878325691772,1.98914449576915,2.69263504296152,1.17263029990548,1.2604344302271,1.89395788468168,1.96764231747404,1.3884040159864,2.79040733700489,3.48755421819505,6.42209383019432,5.26591519723137,6.40253109908471,8.99863785958999,9.79539915749726,5.92785311285837,9.93127498826751,3.99550902271842,1.23485534855141,1.65209391491899,1.32225283331772,0.426576501070468,0.232236671860439,0.128867461322093,1.21010114774006,0.667134131534611,0.570676878337677,1.42358718463353,2.14108641141214,3.01602250560323,2.98434708061726,2.72949721966768,1.79763881730844,1.51296634912286,1.39398891278057,0.379335801906163,1.02823661348756,1.1270773567308,1.01825663922657,2.90928730751439,4.1380133735288,6.26041717530147,11.9564219863478,8.63493003127561,11.7227305725711,16.008441862706,0.500535317148282,0.982794975566015,2.02375901146368,2.23146133527353,2.17059443777175,3.05551022137704,8.34318798607351,12.4844124616777,6.58947391651396,8.62609239164127,11.5363693777236,9.04909252032226,13.639259409144,15.7869723899283,21.2275149399882,13.1174765018289,0.757965647081939,0.814824882210129,0.509235257325564,1.17345124144251,2.1775813467436,2.38043640886014,7.80534591431195,6.9359463406724,5.75808193086815,9.8861956567642,12.7813385478276,8.11619414769709,14.4649058581512,3.01582567878545,3.26343410291226,29.0140921081231,20.9711927191597,13.6468001489623,11.9555920324047,1.63934945376675,22.7223834483936,2.2085575359138,3.12350995437311,5.60100834105277,2.86762557543062,4.90157082981267,5.66153061577665,3.23848561339915,2.63030272120181,3.16230222357219,7.06906896127976,4.9679029822894,0.534196811001766,3.90928702448583,5.27904393512113,23.8941249011933,0,0,1.50884063804718,1.47650946440386,5.53383266299069,8.5281336745513,5.45300594216258,5.34746067577082,6.95280867458795,10.5418608574999,15.470331487228,15.6602218646742,0.720244376125241,0.129358683782755,2.57204442037911,2.30542303734956,2.67553226403106,2.46823530903181,3.04464949114599,3.28540391289194,9.53244318887191,12.7906470871878,24.403165435339,20.3445177636841,12.002272060703,10.6241386162791,9.68431308495861,2.04036585640896,9.08583979851498,1.53783792718067,1.44470807574256,0.925972636848558,0.376736914009382,1.50363650493128,0.686334519619568,9.17883521966819,11.7559219951873,10.6413979829406,5.72802370809068,0.158167996790568,0,0.648032044930808,0.836353184057875,2.40198820120795,1.48350781023303,6.11635572367486,4.97336289769656,2.98114438571124,6.83473244395618,3.38215763210514,1.04661582230785,1.15820943319968,1.94451188344048,1.16243841129958,2.53434188236167,4.10750335260139,4.4269490846943,1.25831213310853,2.89900944991207,6.62469014393091,2.8441000856536,0.202725215290164,0,0.649604114888975,0.358053391334963,0.596044064343795,1.44234539423963,1.32920574457119,1.31256384932592,1.143102099825,1.61321896218945,1.8516997340553,1.73181314952593,2.45441494581295,19.0453522236778,1.55390167361845,0.358855426437903,1.51096154727671,14.6824091464465,5.06742683718191,3.6630324853453,8.57473516316263,13.5424468089548,8.471277639256,5.9842280745933,8.02053718815155,4.98374228796694,13.0165678756422,14.3524840504043,12.8254275044043,12.158672487054,17.2194115413998,18.1216109113137,0.518936737920883,0.399024873401031,0.341467211508268,2.67417388775123,0.628839487883947,4.59608771125035,5.11167473943715,2.47242068686673,3.85103051510178,5.05394423527595,3.29523089857312,3.77252682772152,3.7456602987953,4.03358460150676,4.36509564062661,4.28664322154766,5.09891034157364,3.27945674788299,2.47251540481984,4.41596760403192,4.4573002810104,3.90446773550542,5.00715998889374,3.48831399917588,5.55245344450451,3.38458431566706,2.0122077016005,3.6829759601298,2.8518863907631,4.48913817326191,2.72860541685601,3.44765688314472,3.27384834535751,2.78886314134739,6.75173138433995,4.49659040288303,7.95367468714389,10.09893954027,11.8598765882683,5.7353768971074,7.65163857547391|short_description=p2@Rora}}
|EntrezGene=19883
|HGNC=
|MCL_coexpression_id=2501
|UniProt=
|association_with_transcript=12bp_to_uc009qna.1,uc012gwh.1_5end
|description=CAGE_peak_2_at_Rora_5end
|id=chr9:69137672..69137702,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007023!3.54e-08!51;UBERON:0000475!1.50e-07!200;UBERON:0004111!4.84e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.88e-08,51;UBERON:0004111,9.82e-07,122
|phase1_expression=3.68342348341026,0,0.454999239389536,0,0,0.16787927191189,0.233612640595526,7.48915275961142,9.99599927276834,19.4273556847255,5.47897498321616,8.69516533049167,3.59521532855532,4.28359971853087,0.999329285446988,0.607425802169478,0,0.630924330716475,0.548457734422955,0,8.67441559540912,0.297872853602656,0,0.47997726838022,0.22940928106717,0,0,0,0.380046838912748,0.252030129759931,0.665191531965914,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,9.06457089424156,7.70464677268311,2.0190142737785,0,1.30815093828268,0.439372365468944,2.13872888981712,0.55994568650145,0,0.167782606057736,5.07753499407941,7.39406358113421,5.91696702882678,9.16907007804022,6.18806510732931,0.404632921719196,0.528990979272033,1.26766280701236,0.338844532069132,0,2.2497492932035,0.988866362566974,2.1314403448383,1.49800055259202,1.15265491596466,0.414758449233911,0,0,1.42825492201902,0.220868540951614,0.122490799214954,0.287536413054709,0.919218786610021,24.2254938198655,35.369392649597,32.1037654505549,1.97829431595291,0.914876436024097,2.6045668527838,5.58365998002762,7.31591393041184,7.94550888439413,1.47314292736834,3.13217697758026,0.186399445825301,1.8931548333296,1.13357340160178,15.0729534124872,12.0459342777394,6.79971333707751,14.5719861742211,10.3964226791627,12.0967259516281,10.8142203501449,2.55645483867087,2.07828803682295,1.06001872353102,2.67602497575693,14.115912515575,7.64415719119937,0,1.29894624606728,0.760079596425296,1.01104889002957,14.1588010851634,3.36619248741323,13.8051189330287,2.4287945747259,3.34912026143355,7.37969591219387,9.3448037142626,10.7005723493491,11.9383261763192,9.39340877390621,10.7003524120735,1.76922110389975,4.85300549842228,6.8460870722722,3.87900202508178,13.0474232852686,23.1296829639122,23.0391377494801,2.81002760729451,5.03223522924865,3.59941638596045,3.93917703926501,13.0317856282196,6.40500843946077,0.753926112677186,13.9059456153821,16.3657892691412,29.298114282898,21.9025705141473,2.03678727700633,5.22509276562391,4.29628689337247,25.6739064181498,1.17108398666433,1.14951052216736,2.70093194708024,3.16480117455002,6.32739442107349,5.38077625196369,7.58983968933804,25.3529303324235,0.646703978798527,0,0.527853372491847,0.657587197282725,3.33656699070717,16.716103993064,14.1989674121481,0.59710280045548,2.1066395619397,2.05878325691772,1.98914449576915,2.69263504296152,1.17263029990548,1.2604344302271,1.89395788468168,1.96764231747404,1.3884040159864,2.79040733700489,3.48755421819505,6.42209383019432,5.26591519723137,6.40253109908471,8.99863785958999,9.79539915749726,5.92785311285837,9.93127498826751,3.99550902271842,1.23485534855141,1.65209391491899,1.32225283331772,0.426576501070468,0.232236671860439,0.128867461322093,1.21010114774006,0.667134131534611,0.570676878337677,1.42358718463353,2.14108641141214,3.01602250560323,2.98434708061726,2.72949721966768,1.79763881730844,1.51296634912286,1.39398891278057,0.379335801906163,1.02823661348756,1.1270773567308,1.01825663922657,2.90928730751439,4.1380133735288,6.26041717530147,11.9564219863478,8.63493003127561,11.7227305725711,16.008441862706,0.500535317148282,0.982794975566015,2.02375901146368,2.23146133527353,2.17059443777175,3.05551022137704,8.34318798607351,12.4844124616777,6.58947391651396,8.62609239164127,11.5363693777236,9.04909252032226,13.639259409144,15.7869723899283,21.2275149399882,13.1174765018289,0.757965647081939,0.814824882210129,0.509235257325564,1.17345124144251,2.1775813467436,2.38043640886014,7.80534591431195,6.9359463406724,5.75808193086815,9.8861956567642,12.7813385478276,8.11619414769709,14.4649058581512,3.01582567878545,3.26343410291226,29.0140921081231,20.9711927191597,13.6468001489623,11.9555920324047,1.63934945376675,22.7223834483936,2.2085575359138,3.12350995437311,5.60100834105277,2.86762557543062,4.90157082981267,5.66153061577665,3.23848561339915,2.63030272120181,3.16230222357219,7.06906896127976,4.9679029822894,0.534196811001766,3.90928702448583,5.27904393512113,23.8941249011933,0,0,1.50884063804718,1.47650946440386,5.53383266299069,8.5281336745513,5.45300594216258,5.34746067577082,6.95280867458795,10.5418608574999,15.470331487228,15.6602218646742,0.720244376125241,0.129358683782755,2.57204442037911,2.30542303734956,2.67553226403106,2.46823530903181,3.04464949114599,3.28540391289194,9.53244318887191,12.7906470871878,24.403165435339,20.3445177636841,12.002272060703,10.6241386162791,9.68431308495861,2.04036585640896,9.08583979851498,1.53783792718067,1.44470807574256,0.925972636848558,0.376736914009382,1.50363650493128,0.686334519619568,9.17883521966819,11.7559219951873,10.6413979829406,5.72802370809068,0.158167996790568,0,0.648032044930808,0.836353184057875,2.40198820120795,1.48350781023303,6.11635572367486,4.97336289769656,2.98114438571124,6.83473244395618,3.38215763210514,1.04661582230785,1.15820943319968,1.94451188344048,1.16243841129958,2.53434188236167,4.10750335260139,4.4269490846943,1.25831213310853,2.89900944991207,6.62469014393091,2.8441000856536,0.202725215290164,0,0.649604114888975,0.358053391334963,0.596044064343795,1.44234539423963,1.32920574457119,1.31256384932592,1.143102099825,1.61321896218945,1.8516997340553,1.73181314952593,2.45441494581295,19.0453522236778,1.55390167361845,0.358855426437903,1.51096154727671,14.6824091464465,5.06742683718191,3.6630324853453,8.57473516316263,13.5424468089548,8.471277639256,5.9842280745933,8.02053718815155,4.98374228796694,13.0165678756422,14.3524840504043,12.8254275044043,12.158672487054,17.2194115413998,18.1216109113137,0.518936737920883,0.399024873401031,0.341467211508268,2.67417388775123,0.628839487883947,4.59608771125035,5.11167473943715,2.47242068686673,3.85103051510178,5.05394423527595,3.29523089857312,3.77252682772152,3.7456602987953,4.03358460150676,4.36509564062661,4.28664322154766,5.09891034157364,3.27945674788299,2.47251540481984,4.41596760403192,4.4573002810104,3.90446773550542,5.00715998889374,3.48831399917588,5.55245344450451,3.38458431566706,2.0122077016005,3.6829759601298,2.8518863907631,4.48913817326191,2.72860541685601,3.44765688314472,3.27384834535751,2.78886314134739,6.75173138433995,4.49659040288303,7.95367468714389,10.09893954027,11.8598765882683,5.7353768971074,7.65163857547391
|short_description=p2@Rora
}}

Revision as of 18:37, 14 September 2013

Short description:p2@Rora
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rora_5end
Coexpression cluster:MCL_coexpression_mm9:2501
Association with transcript: 12bp_to_uc009qna.1, uc012gwh.1_5end
EntrezGene:Rora
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rora

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E710.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F219.43
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.48
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.70
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.60
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.28
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.06
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.70
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.92
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E19.17
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.19
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D324.23
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F335.37
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D732.10
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.95
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D91.89
Mouse Schwann, donor2.CNhs12573.11746-123F91.13
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.07
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.05
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C814.57
Mouse hepatocyte, donor6.CNhs13090.11822-124F410.40
Mouse hepatocyte, donor8.CNhs13091.11824-124F612.10
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B614.16
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D713.81
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I17.38
adrenal gland, embryo E18.CNhs11026.1262-18F59.34
adrenal gland, neonate N00.CNhs11191.1311-23C110.70
adrenal gland, neonate N25.CNhs11223.1377-27I311.94
amnion, adult pregnant day17.5.CNhs10488.583-22A89.39
aorta, adult.CNhs10498.46-23H110.70
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F54.85
bone (os femoris), neonate N16.CNhs11225.1525-43A66.85
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B223.13
cerebellum, neonate N30.CNhs11135.1395-42I223.04
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.03
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.94
corpora quadrigemina, adult.CNhs10501.16-22A413.03
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D513.91
cortex, neonate N30.CNhs11107.1392-42F216.37
diencephalon, adult.CNhs10482.20-12F229.30
diencephalon, neonate N30.CNhs11201.1388-42B221.90
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.23
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G425.67
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C92.70
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C66.33
eyeball, neonate N01.CNhs11140.1532-43E75.38
eyeball, neonate N02.CNhs11205.1551-44G87.59
eyeball, neonate N16.CNhs11188.777-19A225.35
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C416.72
forelimb, embryo E18.CNhs11008.1520-43B514.20
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G33.49
heart, neonate N00.CNhs11213.639-21E36.42
heart, neonate N03.CNhs11221.1349-25I25.27
heart, neonate N10.CNhs11118.749-24G16.40
heart, neonate N16.CNhs11209.782-15G19.00
heart, neonate N20.CNhs11127.821-26I69.80
heart, neonate N25.CNhs11196.1351-25D35.93
heart, neonate N30.CNhs11202.1390-42D29.93
hippocampus, adult.CNhs10478.13-16E84.00
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E92.14
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A52.73
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C72.91
kidney, neonate N00.CNhs11214.646-21G74.14
kidney, neonate N10.CNhs11206.758-6D56.26
kidney, neonate N20.CNhs11113.832-19I111.96
kidney, neonate N25.CNhs11122.1353-25F38.63
kidney, neonate N30.CNhs11203.1385-42H111.72
liver, adult pregnant day01.CNhs10466.508-5B216.01
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G48.34
liver, neonate N00.CNhs11117.641-24F412.48
liver, neonate N03.CNhs11123.1345-25G26.59
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H211.54
liver, neonate N10.CNhs11115.751-24B99.05
liver, neonate N20.CNhs11220.823-25A313.64
liver, neonate N25.CNhs11198.1368-26H115.79
liver, neonate N30.CNhs11106.1382-42D121.23
lung, adult.CNhs10474.28-22B113.12
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C67.81
lung, neonate N06.CNhs11212.683-20E56.94
lung, neonate N07.CNhs11111.715-19A35.76
lung, neonate N10.CNhs11219.750-23E69.89
lung, neonate N20.CNhs11109.822-18A412.78
lung, neonate N25.CNhs11119.1359-25C78.12
lung, neonate N30.CNhs11133.1394-42H214.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B629.01
mammary gland, adult pregnant day19.CNhs10476.588-5H220.97
medulla oblongata, adult.CNhs10477.17-12C213.65
medulla oblongata, neonate N30.CNhs11200.1396-42A311.96
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C222.72
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.60
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I97.07
ovary, adult.CNhs10507.91-2I74.97
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I43.91
oviduct, adult pregnant day01.CNhs10500.988-6G65.28
pancreas, adult.CNhs10486.34-16E423.89
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I75.53
pancreas, neonate N00.CNhs11105.645-26G98.53
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B66.95
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H515.47
pituitary gland, adult.CNhs10493.21-1G815.66
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G39.53
prostate, adult.CNhs10470.859-1F812.79
skin, adult.CNhs10492.30-1C324.40
skin, neonate N00.CNhs11124.650-25G420.34
skin, neonate N03.CNhs11215.662-22H312.00
skin, neonate N06.CNhs11097.693-20I510.62
skin, neonate N10.CNhs11108.762-6C49.68
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C99.09
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C911.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.64
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A96.12
stomach, neonate N25.CNhs11104.1355-25E44.97
stomach, neonate N30.CNhs11134.1386-42I12.98
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B74.11
testis, neonate N07.CNhs11222.726-26I44.43
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E26.62
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D31.14
thymus, neonate N10.CNhs11194.748-24E41.61
thymus, neonate N20.CNhs11186.820-7A21.85
thymus, neonate N25.CNhs11125.1362-25G71.73
thymus, neonate N30.CNhs11132.1393-42G22.45
tongue, adult.CNhs10499.32-1B419.05
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.51
urinary bladder, adult.CNhs10481.879-12E414.68
uterus, adult pregnant day19.CNhs10497.590-15F55.07
uterus, adult.CNhs10509.92-27E53.66
vagina, adult.CNhs10502.89-27D58.57
vesicular gland, adult.CNhs10491.51-27F813.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.16
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.22
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.12
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.37
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.90
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.55
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.45
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.79
whole body, embryo E17.5.CNhs10513.490-9F96.75
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B37.95
whole body, neonate N00.CNhs10525.657-19C210.10
whole body, neonate N01.CNhs10576.659-23C611.86
whole body, neonate N06.CNhs10515.692-21D15.74
whole body, neonate N10.CNhs10518.761-6B47.65





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
adult organism3.88e-0851
anatomical conduit9.82e-07122







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:69137672..69137702,%2B&oldid=3062451"