FFCP PHASE1:Mm9::chr9:56482905..56482942,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=235402|HGNC=|MCL_coexpression_id=864|UniProt=A9DA50|association_with_transcript=266bp_to_uc009pth.1_5end|description=CAGE_peak_2_at_Lingo1_5end|id=chr9:56482905..56482942,-|ontology_enrichment_celltype=CL:0000117!3.49e-09!23;CL:0000337!3.49e-09!23;CL:0000221!2.37e-07!44;CL:0000133!2.37e-07!44;CL:0002319!2.61e-07!43;CL:0000055!3.82e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.51e-12,23;CL:0000337,3.51e-12,23;CL:0002319,2.70e-08,43;CL:0000221,5.76e-08,44;CL:0000133,5.76e-08,44;CL:0000393,8.25e-08,39;CL:0000211,8.25e-08,39;CL:0000540,5.67e-07,33;CL:0000047,5.67e-07,33;CL:0000031,5.67e-07,33;CL:0000404,5.67e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.87e-21!75;UBERON:0001016!1.87e-21!75;UBERON:0004121!2.90e-21!102;UBERON:0000924!2.90e-21!102;UBERON:0006601!2.90e-21!102;UBERON:0001017!6.56e-21!73;UBERON:0005743!6.56e-21!73;UBERON:0002346!1.18e-20!71;UBERON:0003075!1.18e-20!71;UBERON:0007284!1.18e-20!71;UBERON:0001049!1.86e-19!52;UBERON:0005068!1.86e-19!52;UBERON:0006241!1.86e-19!52;UBERON:0007135!1.86e-19!52;UBERON:0000033!3.09e-19!63;UBERON:0000955!3.38e-18!50;UBERON:0006238!3.38e-18!50;UBERON:0002616!1.10e-17!49;UBERON:0003056!5.94e-16!49;UBERON:0002020!1.76e-14!34;UBERON:0003080!9.62e-14!40;UBERON:0002780!3.10e-13!39;UBERON:0001890!3.10e-13!39;UBERON:0006240!3.10e-13!39;UBERON:0002791!1.59e-11!29;UBERON:0003528!1.59e-11!29;UBERON:0001893!1.59e-11!29;UBERON:0007811!6.00e-10!86;UBERON:0002021!9.61e-09!10;UBERON:0000411!9.61e-09!10;UBERON:0001950!9.61e-09!10;UBERON:0000153!1.39e-08!94;UBERON:0000956!1.61e-08!21;UBERON:0001869!1.61e-08!21;UBERON:0000203!1.61e-08!21;UBERON:0002619!1.72e-07!17;UBERON:0000025!9.60e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.53e-26,75;UBERON:0001017,4.19e-26,73;UBERON:0004121,2.99e-25,95;UBERON:0000924,2.99e-25,95;UBERON:0006601,2.99e-25,95;UBERON:0000073,3.05e-25,54;UBERON:0002346,6.61e-24,64;UBERON:0003075,6.61e-24,64;UBERON:0007284,6.61e-24,64;UBERON:0001049,4.35e-23,52;UBERON:0005068,4.35e-23,52;UBERON:0006241,4.35e-23,52;UBERON:0007135,4.35e-23,52;UBERON:0002020,6.12e-21,34;UBERON:0010371,2.00e-20,73;UBERON:0003056,2.21e-18,49;UBERON:0000955,2.87e-18,47;UBERON:0006238,2.87e-18,47;UBERON:0002616,1.73e-17,46;UBERON:0003528,5.86e-16,29;UBERON:0002791,5.86e-16,29;UBERON:0001893,5.86e-16,29;UBERON:0003080,6.43e-16,40;UBERON:0002780,4.06e-15,39;UBERON:0001890,4.06e-15,39;UBERON:0006240,4.06e-15,39;UBERON:0002021,3.97e-14,10;UBERON:0000411,3.97e-14,10;UBERON:0001950,3.97e-14,10;UBERON:0010314,1.14e-12,92;UBERON:0000956,2.49e-10,21;UBERON:0001869,2.49e-10,21;UBERON:0000203,2.49e-10,21;UBERON:0002619,2.86e-10,17;UBERON:0003076,6.08e-08,12;UBERON:0003057,6.08e-08,12;UBERON:0000025,7.98e-08,114;UBERON:0002240,2.28e-07,6;UBERON:0005174,2.28e-07,6;UBERON:0001137,2.28e-07,6;UBERON:0002420,4.46e-07,8;UBERON:0007245,4.46e-07,8;UBERON:0010009,4.46e-07,8;UBERON:0010011,4.46e-07,8;UBERON:0000454,4.46e-07,8|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0,0,2.97651515528744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52511090331616,3.34543873024398,4.03802854755699,0.782391344348039,1.74420125104357,0.439372365468944,0,0.55994568650145,4.31257693094915,0,0,0,0.257259436035947,0,0,8.29497489524351,12.1667925232568,7.60597684207415,0,0,0,0.988866362566974,0,4.19440154725767,4.2264013585371,0.311068836925433,0.945041568321835,1.05162480675691,6.85562362569129,5.52171352379034,0.489963196859816,0.670918297127655,0,5.50579404996943,7.78892762319645,5.83704826373725,9.62769900430415,11.618930737506,6.77187381723788,2.51264699101243,0,4.12555268997387,5.59794312399969,5.83723891276322,7.45597783301202,0.454357159999104,1.5870027622425,0,0,0,0,0,0,0.702222100658759,0,0,0,0.422530259330042,0,0,0,0,0,0,1.25602267690966,1.03575153458869,0.445326417194474,0.520455980298408,0.304465478312141,0.461230994512117,0.904335843315735,0.705532242814229,0,0,0,0,0.161766849947409,0.220841518460394,0,0,1.17112318804619,0.628340120440365,0,0,0,0,2.84602214869163,7.32000964509802,1.88481528169297,40.5010666048004,32.2201476236216,6.44142938134636,8.27430441645564,0.203678727700633,19.2830804445644,109.934399918648,0.210441855886474,0.130120442962704,1.14951052216736,2.16074555766419,1.65775299619287,2.4493139694478,2.17793324484245,1.3118241438362,0.517406741478031,0,0,0,0.657587197282725,0.278047249225598,0,0,0.796137067273973,0,0,0,0.414251545071004,0,0.540186184383045,0.23674473558521,0,0,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.492502392237286,0.486412857275134,0.146199987425332,0.219550115291051,0,14.2997165023607,5.04232600658494,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0,0.456994050438915,0,0,0.387904974335251,0.140271639780637,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.325929952884052,0.339490171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| ||
|EntrezGene=235402 | |||
|HGNC= | |||
|MCL_coexpression_id=864 | |||
|UniProt=A9DA50 | |||
|association_with_transcript=266bp_to_uc009pth.1_5end | |||
|description=CAGE_peak_2_at_Lingo1_5end | |||
|id=chr9:56482905..56482942,- | |||
|ontology_enrichment_celltype=CL:0000117!3.49e-09!23;CL:0000337!3.49e-09!23;CL:0000221!2.37e-07!44;CL:0000133!2.37e-07!44;CL:0002319!2.61e-07!43;CL:0000055!3.82e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.51e-12,23;CL:0000337,3.51e-12,23;CL:0002319,2.70e-08,43;CL:0000221,5.76e-08,44;CL:0000133,5.76e-08,44;CL:0000393,8.25e-08,39;CL:0000211,8.25e-08,39;CL:0000540,5.67e-07,33;CL:0000047,5.67e-07,33;CL:0000031,5.67e-07,33;CL:0000404,5.67e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.87e-21!75;UBERON:0001016!1.87e-21!75;UBERON:0004121!2.90e-21!102;UBERON:0000924!2.90e-21!102;UBERON:0006601!2.90e-21!102;UBERON:0001017!6.56e-21!73;UBERON:0005743!6.56e-21!73;UBERON:0002346!1.18e-20!71;UBERON:0003075!1.18e-20!71;UBERON:0007284!1.18e-20!71;UBERON:0001049!1.86e-19!52;UBERON:0005068!1.86e-19!52;UBERON:0006241!1.86e-19!52;UBERON:0007135!1.86e-19!52;UBERON:0000033!3.09e-19!63;UBERON:0000955!3.38e-18!50;UBERON:0006238!3.38e-18!50;UBERON:0002616!1.10e-17!49;UBERON:0003056!5.94e-16!49;UBERON:0002020!1.76e-14!34;UBERON:0003080!9.62e-14!40;UBERON:0002780!3.10e-13!39;UBERON:0001890!3.10e-13!39;UBERON:0006240!3.10e-13!39;UBERON:0002791!1.59e-11!29;UBERON:0003528!1.59e-11!29;UBERON:0001893!1.59e-11!29;UBERON:0007811!6.00e-10!86;UBERON:0002021!9.61e-09!10;UBERON:0000411!9.61e-09!10;UBERON:0001950!9.61e-09!10;UBERON:0000153!1.39e-08!94;UBERON:0000956!1.61e-08!21;UBERON:0001869!1.61e-08!21;UBERON:0000203!1.61e-08!21;UBERON:0002619!1.72e-07!17;UBERON:0000025!9.60e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.53e-26,75;UBERON:0001017,4.19e-26,73;UBERON:0004121,2.99e-25,95;UBERON:0000924,2.99e-25,95;UBERON:0006601,2.99e-25,95;UBERON:0000073,3.05e-25,54;UBERON:0002346,6.61e-24,64;UBERON:0003075,6.61e-24,64;UBERON:0007284,6.61e-24,64;UBERON:0001049,4.35e-23,52;UBERON:0005068,4.35e-23,52;UBERON:0006241,4.35e-23,52;UBERON:0007135,4.35e-23,52;UBERON:0002020,6.12e-21,34;UBERON:0010371,2.00e-20,73;UBERON:0003056,2.21e-18,49;UBERON:0000955,2.87e-18,47;UBERON:0006238,2.87e-18,47;UBERON:0002616,1.73e-17,46;UBERON:0003528,5.86e-16,29;UBERON:0002791,5.86e-16,29;UBERON:0001893,5.86e-16,29;UBERON:0003080,6.43e-16,40;UBERON:0002780,4.06e-15,39;UBERON:0001890,4.06e-15,39;UBERON:0006240,4.06e-15,39;UBERON:0002021,3.97e-14,10;UBERON:0000411,3.97e-14,10;UBERON:0001950,3.97e-14,10;UBERON:0010314,1.14e-12,92;UBERON:0000956,2.49e-10,21;UBERON:0001869,2.49e-10,21;UBERON:0000203,2.49e-10,21;UBERON:0002619,2.86e-10,17;UBERON:0003076,6.08e-08,12;UBERON:0003057,6.08e-08,12;UBERON:0000025,7.98e-08,114;UBERON:0002240,2.28e-07,6;UBERON:0005174,2.28e-07,6;UBERON:0001137,2.28e-07,6;UBERON:0002420,4.46e-07,8;UBERON:0007245,4.46e-07,8;UBERON:0010009,4.46e-07,8;UBERON:0010011,4.46e-07,8;UBERON:0000454,4.46e-07,8 | |||
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|short_description=p2@Lingo1 | |||
}} |
Revision as of 18:17, 14 September 2013
Short description: | p2@Lingo1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lingo1_5end |
Coexpression cluster: | MCL_coexpression_mm9:864 |
Association with transcript: | 266bp_to_uc009pth.1_5end |
EntrezGene: | Lingo1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.51e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.51e-12 | 23 |
neural cell | 2.70e-08 | 43 |
ectodermal cell | 5.76e-08 | 44 |
neurectodermal cell | 5.76e-08 | 44 |
electrically responsive cell | 8.25e-08 | 39 |
electrically active cell | 8.25e-08 | 39 |
neuron | 5.67e-07 | 33 |
neuronal stem cell | 5.67e-07 | 33 |
neuroblast | 5.67e-07 | 33 |
electrically signaling cell | 5.67e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.