FFCP PHASE1:Mm9::chr9:42914263..42914279,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=69632|HGNC=|UniProt=F8VQN6,Q8R4H2,Q9D7D6|association_with_transcript=-462bp_to_ENSMUST00000165665,NM_027144,uc009pba.1,uc009pbb.1,uc009pbc.1_5end|description=CAGE_peak_4_at_Arhgef12_5end|id=chr9:42914263..42914279,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!9.56e-10!333;UBERON:0000922!8.15e-09!328|ontology_enrichment_uberon_v019_2=UBERON:0000922,5.52e-07,320|phase1_expression=0.960893082628764,2.09385244583617,2.72999543633722,0.90739263392049,1.00179145989269,2.51818907867835,1.40167584357315,0.129123323441576,0,0,0,0,0,0,1.66554880907831,2.83465374345756,4.19737126876888,0.157731082679119,0,0,0.935476191661768,0,0,0.799962113967033,1.14704640533585,1.14846392823004,1.29228598847722,1.29282739611533,0.760093677825496,2.01624103807945,1.77384408524244,3.17515336729816,2.46025915033828,0,0.577703239502549,0.664938581433969,1.42918549383658,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0.183546752161682,0.782391344348039,0.436050312760893,0,0.194429899074283,0.839918529752175,0,0,0,0,0.514518872071894,0,0,3.23706337375356,1.5869729378161,4.43681982454325,0,0,0.899899717281399,0,0,0.299600110518405,0,2.38486108309499,2.29510095163874,2.3135745748652,1.42825492201902,1.32521124570968,3.67472397644862,3.73797336971122,3.67687514644008,0,1.78762273319263,0.307213066512487,3.16527090552465,1.46380229763855,1.56274011167028,0.279182999001381,1.12552522006336,0.763991238884051,0.589257170947335,0.854230084794618,1.67759501242771,1.51452386666368,1.36028808192214,0.579728977403356,0,1.3599426674155,1.07940638327563,0,0,1.68533304158102,0,0.519572009205738,0,1.83096445709685,1.28326477414318,2.54805239706646,0,0.865964164044856,0,2.02209778005913,0.91347103775248,0.258937883647172,0.742210695324124,2.25530924795977,0.913396434936424,0.922461989024234,1.80867168663147,1.17588707135705,0.879666139307728,1.97755974187499,0.578397427679647,3.5384422077995,1.45590164952668,2.20841518460394,0.484875253135222,0,2.63502717310392,2.30391377494801,2.04365644166873,0,0,0.127070227073065,1.3481157546434,2.74500361691176,4.39790232395025,1.39059456153821,1.27857728665165,1.66230435647648,2.43361894601636,2.74966282395854,1.49288364732112,1.76905930903572,3.99839526184301,4.03373373184381,2.06911893990126,3.60124259610698,3.46621081022145,6.66757691683013,5.50888997224854,6.93392761741993,4.13925393182425,3.88022387279116,4.9167580843633,3.16712023495108,3.06874025398605,1.39023624612799,2.43776516565517,2.46938563689532,2.18937693500343,0,0.257347907114715,0,0.828503090142008,2.11073453982987,3.24111710629827,4.26140524053378,2.16440654922144,2.46827380619805,2.09280550275367,3.75582761959467,3.38619492864792,3.78487654801005,2.13417703302824,2.51313309592153,2.19299981137998,1.53685080703735,1.07365135008297,1.26173969138476,2.46971069710283,0.991256348951394,1.05780226665418,2.98603550749328,2.55460339046482,3.60828891701861,1.21010114774006,2.00140239460383,2.28270751335071,2.37264530772256,0.988193728344065,2.5133520880027,2.58643413653496,1.16978452271472,0.898819408654221,0.432276099749388,0.796565093017469,2.84501851429623,3.88444942873078,3.38123207019241,4.07302655690629,4.07300223052014,5.19005067188357,5.24863258131335,1.62371162777562,3.767969468193,1.97435462274881,0.296452627087149,3.00321190288969,2.75182593158484,2.47348323623339,3.65148218499305,3.37648023653384,3.05551022137704,2.87696137450811,2.59416362840057,1.37280706594041,1.43768206527355,1.11642284300551,0.936113019343682,1.26289438973556,1.61457672169721,0.964887042726734,0.739012760666419,1.89491411770485,3.25929952884052,3.22515662972857,1.64283173801951,3.51763140627813,2.85652369063216,2.53673742215138,3.15270288212382,2.43611158613652,1.75400245523236,1.14704320301017,1.38147985492716,1.59113964439663,0,0,0,1.93155722413313,1.44495530989013,0.937693492737625,0.491804836130026,2.27223834483936,1.89304931649754,3.12350995437311,2.15423397732799,2.38968797952552,2.89638276307112,2.83076530788832,0.404810701674894,4.38383786866968,1.18586333383957,1.92792789853084,1.84522110770749,1.6025904330053,3.25773918707152,1.97964147567043,1.32745138339963,2.42780636154981,1.51161778482376,0.754420319023592,1.47650946440386,4.30409207121498,1.29214146584111,2.18120237686503,0.712994756769443,1.8962205476149,4.21674434299995,0,2.7235168460303,2.16073312837572,2.06973894052407,2.7863814554107,5.32020700926821,2.85390108163313,3.45552943264454,3.04464949114599,0.938686832254841,1.90648863777438,1.32317038832977,2.96795255294664,3.39075296061402,3.37752379597673,3.58117032009409,4.43180429311665,2.04036585640896,2.03967832211561,1.53783792718067,1.857481811669,1.29636169158798,3.01389531207506,3.69074414846768,4.11800711771741,0,0,0,1.90934123603023,3.00519193902079,2.64315307264903,2.80813886136683,2.50905955217362,1.9652630737156,2.29269388854195,1.57041565878138,1.83229159388821,0.388844919875379,0,0,2.2427481906596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| ||
|EntrezGene=69632 | |||
|HGNC= | |||
|UniProt=F8VQN6,Q8R4H2,Q9D7D6 | |||
|association_with_transcript=-462bp_to_ENSMUST00000165665,NM_027144,uc009pba.1,uc009pbb.1,uc009pbc.1_5end | |||
|description=CAGE_peak_4_at_Arhgef12_5end | |||
|id=chr9:42914263..42914279,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!9.56e-10!333;UBERON:0000922!8.15e-09!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,5.52e-07,320 | |||
|phase1_expression=0.960893082628764,2.09385244583617,2.72999543633722,0.90739263392049,1.00179145989269,2.51818907867835,1.40167584357315,0.129123323441576,0,0,0,0,0,0,1.66554880907831,2.83465374345756,4.19737126876888,0.157731082679119,0,0,0.935476191661768,0,0,0.799962113967033,1.14704640533585,1.14846392823004,1.29228598847722,1.29282739611533,0.760093677825496,2.01624103807945,1.77384408524244,3.17515336729816,2.46025915033828,0,0.577703239502549,0.664938581433969,1.42918549383658,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0.183546752161682,0.782391344348039,0.436050312760893,0,0.194429899074283,0.839918529752175,0,0,0,0,0.514518872071894,0,0,3.23706337375356,1.5869729378161,4.43681982454325,0,0,0.899899717281399,0,0,0.299600110518405,0,2.38486108309499,2.29510095163874,2.3135745748652,1.42825492201902,1.32521124570968,3.67472397644862,3.73797336971122,3.67687514644008,0,1.78762273319263,0.307213066512487,3.16527090552465,1.46380229763855,1.56274011167028,0.279182999001381,1.12552522006336,0.763991238884051,0.589257170947335,0.854230084794618,1.67759501242771,1.51452386666368,1.36028808192214,0.579728977403356,0,1.3599426674155,1.07940638327563,0,0,1.68533304158102,0,0.519572009205738,0,1.83096445709685,1.28326477414318,2.54805239706646,0,0.865964164044856,0,2.02209778005913,0.91347103775248,0.258937883647172,0.742210695324124,2.25530924795977,0.913396434936424,0.922461989024234,1.80867168663147,1.17588707135705,0.879666139307728,1.97755974187499,0.578397427679647,3.5384422077995,1.45590164952668,2.20841518460394,0.484875253135222,0,2.63502717310392,2.30391377494801,2.04365644166873,0,0,0.127070227073065,1.3481157546434,2.74500361691176,4.39790232395025,1.39059456153821,1.27857728665165,1.66230435647648,2.43361894601636,2.74966282395854,1.49288364732112,1.76905930903572,3.99839526184301,4.03373373184381,2.06911893990126,3.60124259610698,3.46621081022145,6.66757691683013,5.50888997224854,6.93392761741993,4.13925393182425,3.88022387279116,4.9167580843633,3.16712023495108,3.06874025398605,1.39023624612799,2.43776516565517,2.46938563689532,2.18937693500343,0,0.257347907114715,0,0.828503090142008,2.11073453982987,3.24111710629827,4.26140524053378,2.16440654922144,2.46827380619805,2.09280550275367,3.75582761959467,3.38619492864792,3.78487654801005,2.13417703302824,2.51313309592153,2.19299981137998,1.53685080703735,1.07365135008297,1.26173969138476,2.46971069710283,0.991256348951394,1.05780226665418,2.98603550749328,2.55460339046482,3.60828891701861,1.21010114774006,2.00140239460383,2.28270751335071,2.37264530772256,0.988193728344065,2.5133520880027,2.58643413653496,1.16978452271472,0.898819408654221,0.432276099749388,0.796565093017469,2.84501851429623,3.88444942873078,3.38123207019241,4.07302655690629,4.07300223052014,5.19005067188357,5.24863258131335,1.62371162777562,3.767969468193,1.97435462274881,0.296452627087149,3.00321190288969,2.75182593158484,2.47348323623339,3.65148218499305,3.37648023653384,3.05551022137704,2.87696137450811,2.59416362840057,1.37280706594041,1.43768206527355,1.11642284300551,0.936113019343682,1.26289438973556,1.61457672169721,0.964887042726734,0.739012760666419,1.89491411770485,3.25929952884052,3.22515662972857,1.64283173801951,3.51763140627813,2.85652369063216,2.53673742215138,3.15270288212382,2.43611158613652,1.75400245523236,1.14704320301017,1.38147985492716,1.59113964439663,0,0,0,1.93155722413313,1.44495530989013,0.937693492737625,0.491804836130026,2.27223834483936,1.89304931649754,3.12350995437311,2.15423397732799,2.38968797952552,2.89638276307112,2.83076530788832,0.404810701674894,4.38383786866968,1.18586333383957,1.92792789853084,1.84522110770749,1.6025904330053,3.25773918707152,1.97964147567043,1.32745138339963,2.42780636154981,1.51161778482376,0.754420319023592,1.47650946440386,4.30409207121498,1.29214146584111,2.18120237686503,0.712994756769443,1.8962205476149,4.21674434299995,0,2.7235168460303,2.16073312837572,2.06973894052407,2.7863814554107,5.32020700926821,2.85390108163313,3.45552943264454,3.04464949114599,0.938686832254841,1.90648863777438,1.32317038832977,2.96795255294664,3.39075296061402,3.37752379597673,3.58117032009409,4.43180429311665,2.04036585640896,2.03967832211561,1.53783792718067,1.857481811669,1.29636169158798,3.01389531207506,3.69074414846768,4.11800711771741,0,0,0,1.90934123603023,3.00519193902079,2.64315307264903,2.80813886136683,2.50905955217362,1.9652630737156,2.29269388854195,1.57041565878138,1.83229159388821,0.388844919875379,0,0,2.24274819065968,2.31641886639937,1.36115831840833,1.6790777052105,1.35164900392623,2.46450201156083,2.21347454234715,1.25831213310853,1.69108884578204,0.576060012515731,0,3.24360344464263,1.23253148597793,1.55904987573354,1.43221356533985,0.39736270956253,0.480781798079875,0,0.201932899896295,0.381034033274999,0.403304740547362,0.194915761479505,0.288635524920988,0.467507608726276,2.26730383615211,0.221985953374065,0.448569283047378,0.503653849092235,1.15913756419314,1.12609485270709,1.83151624267265,2.14368379079066,0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| |||
|short_description=p4@Arhgef12 | |||
}} | |||
Revision as of 17:52, 14 September 2013
| Short description: | p4@Arhgef12 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Arhgef12_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -462bp_to_ENSMUST00000165665, NM_027144, uc009pba.1, uc009pbb.1, uc009pbc.1_5end |
| EntrezGene: | Arhgef12 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryo | 5.52e-07 | 320 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
