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FFCP PHASE1:Mm9::chr9:40183798..40183848,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=235283|HGNC=|MCL_coexpression_id=617|UniProt=|association_with_transcript=103bp_to_ENSMUST00000149492_5end|description=CAGE_peak_12_at_Gramd1b_5end|id=chr9:40183798..40183848,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,1.46e-07,3;CL:0002614,7.48e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.03e-20!63;UBERON:0000073!1.37e-19!75;UBERON:0001016!1.37e-19!75;UBERON:0000955!1.84e-19!50;UBERON:0006238!1.84e-19!50;UBERON:0001017!9.13e-19!73;UBERON:0005743!9.13e-19!73;UBERON:0004121!1.09e-18!102;UBERON:0000924!1.09e-18!102;UBERON:0006601!1.09e-18!102;UBERON:0002616!1.37e-18!49;UBERON:0001049!1.37e-18!52;UBERON:0005068!1.37e-18!52;UBERON:0006241!1.37e-18!52;UBERON:0007135!1.37e-18!52;UBERON:0002346!8.15e-17!71;UBERON:0003075!8.15e-17!71;UBERON:0007284!8.15e-17!71;UBERON:0003056!1.28e-13!49;UBERON:0007811!3.04e-13!86;UBERON:0002020!1.40e-12!34;UBERON:0003080!2.74e-12!40;UBERON:0002021!1.32e-11!10;UBERON:0000411!1.32e-11!10;UBERON:0001950!1.32e-11!10;UBERON:0002780!1.69e-11!39;UBERON:0001890!1.69e-11!39;UBERON:0006240!1.69e-11!39;UBERON:0002619!3.66e-11!17;UBERON:0002791!5.11e-11!29;UBERON:0003528!5.11e-11!29;UBERON:0001893!5.11e-11!29;UBERON:0000153!6.70e-11!94;UBERON:0000956!1.11e-09!21;UBERON:0001869!1.11e-09!21;UBERON:0000203!1.11e-09!21;UBERON:0007023!1.87e-07!51;UBERON:0003076!2.15e-07!12;UBERON:0003057!2.15e-07!12;UBERON:0002298!6.92e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000955,5.79e-29,47;UBERON:0006238,5.79e-29,47;UBERON:0000073,6.68e-29,54;UBERON:0002616,2.96e-27,46;UBERON:0001049,1.34e-25,52;UBERON:0005068,1.34e-25,52;UBERON:0006241,1.34e-25,52;UBERON:0007135,1.34e-25,52;UBERON:0001017,6.05e-25,73;UBERON:0001016,4.28e-24,75;UBERON:0002346,9.55e-24,64;UBERON:0003075,9.55e-24,64;UBERON:0007284,9.55e-24,64;UBERON:0002021,2.24e-23,10;UBERON:0000411,2.24e-23,10;UBERON:0001950,2.24e-23,10;UBERON:0004121,7.08e-21,95;UBERON:0000924,7.08e-21,95;UBERON:0006601,7.08e-21,95;UBERON:0003528,5.11e-20,29;UBERON:0002791,5.11e-20,29;UBERON:0001893,5.11e-20,29;UBERON:0010371,5.16e-20,73;UBERON:0003080,2.64e-19,40;UBERON:0003056,7.13e-19,49;UBERON:0002619,1.58e-18,17;UBERON:0002780,9.51e-18,39;UBERON:0001890,9.51e-18,39;UBERON:0006240,9.51e-18,39;UBERON:0000956,2.95e-17,21;UBERON:0001869,2.95e-17,21;UBERON:0000203,2.95e-17,21;UBERON:0002020,1.79e-16,34;UBERON:0010314,1.55e-14,92;UBERON:0000025,3.65e-11,114;UBERON:0004111,5.97e-11,122;UBERON:0004733,2.59e-10,6;UBERON:0004732,2.59e-10,6;UBERON:0002028,2.59e-10,6;UBERON:0007277,2.59e-10,6;UBERON:0002950,6.66e-09,4;UBERON:0001891,6.66e-09,4;UBERON:0009616,6.66e-09,4;UBERON:0010286,6.66e-09,4;UBERON:0007023,1.15e-08,51;UBERON:0004684,1.46e-07,3;UBERON:0002275,1.46e-07,3;UBERON:0002038,7.48e-07,3;UBERON:0009663,7.48e-07,3;UBERON:0009661,7.48e-07,3;UBERON:0000125,7.48e-07,3;UBERON:0002308,7.48e-07,3;UBERON:0003076,7.69e-07,12;UBERON:0003057,7.69e-07,12|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,3.31668831589172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0.439372365468944,1.1665793944457,0.839918529752175,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.599200221036809,1.15265491596466,0,0,0,0.285650984403804,0.220868540951614,0,0,0,7.70811166995721,3.31987079021488,4.45458946443106,0,0.0914876436024097,0,3.90856198601933,1.12552522006336,2.44477196442896,0.883885756421003,0.142371680799103,0,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0.161766849947409,0.441683036920787,0,0,39.2326267995473,46.0782754989601,0,0,0,0,5.39246301857362,3.20250421973039,0,11.8200537730748,7.16003280524926,5.61027720310812,4.2182728397617,0.305518091550949,1.11966273549084,5.30717792710717,45.8763245832513,0,0,0,0.150704817835715,0.272145996605311,0,0.562210347358373,14.7460921321239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3042074796422,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,7.54587772942622,5.50894926983355,0,0,0,0,0,0,0,0,0,0,0,4.4984984299053,0.567760340833074,0.178065603667255,0.162886959353576,1.31976098378028,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.713475270408282,0.164549020602121,0,0,0,0.441056796109924,0.32977250588296,0,0,0,0,0,4.82105785227325,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.36630324853453,0,3.00943262421218,3.3885110557024,4.14292712856459,6.87474616127276,5.32744865265431,8.90607275701835,12.0863023582352,8.77529250301348,14.8605997063993,14.0474146785103,8.80192529978094,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0,0,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0,0,0,0,0,0.499621155875892,0.233931608445408,0,0,0,0|short_description=p12@Gramd1b}}
|EntrezGene=235283
|HGNC=
|MCL_coexpression_id=617
|UniProt=
|association_with_transcript=103bp_to_ENSMUST00000149492_5end
|description=CAGE_peak_12_at_Gramd1b_5end
|id=chr9:40183798..40183848,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002610,1.46e-07,3;CL:0002614,7.48e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.03e-20!63;UBERON:0000073!1.37e-19!75;UBERON:0001016!1.37e-19!75;UBERON:0000955!1.84e-19!50;UBERON:0006238!1.84e-19!50;UBERON:0001017!9.13e-19!73;UBERON:0005743!9.13e-19!73;UBERON:0004121!1.09e-18!102;UBERON:0000924!1.09e-18!102;UBERON:0006601!1.09e-18!102;UBERON:0002616!1.37e-18!49;UBERON:0001049!1.37e-18!52;UBERON:0005068!1.37e-18!52;UBERON:0006241!1.37e-18!52;UBERON:0007135!1.37e-18!52;UBERON:0002346!8.15e-17!71;UBERON:0003075!8.15e-17!71;UBERON:0007284!8.15e-17!71;UBERON:0003056!1.28e-13!49;UBERON:0007811!3.04e-13!86;UBERON:0002020!1.40e-12!34;UBERON:0003080!2.74e-12!40;UBERON:0002021!1.32e-11!10;UBERON:0000411!1.32e-11!10;UBERON:0001950!1.32e-11!10;UBERON:0002780!1.69e-11!39;UBERON:0001890!1.69e-11!39;UBERON:0006240!1.69e-11!39;UBERON:0002619!3.66e-11!17;UBERON:0002791!5.11e-11!29;UBERON:0003528!5.11e-11!29;UBERON:0001893!5.11e-11!29;UBERON:0000153!6.70e-11!94;UBERON:0000956!1.11e-09!21;UBERON:0001869!1.11e-09!21;UBERON:0000203!1.11e-09!21;UBERON:0007023!1.87e-07!51;UBERON:0003076!2.15e-07!12;UBERON:0003057!2.15e-07!12;UBERON:0002298!6.92e-07!6
|ontology_enrichment_uberon_v019_2=UBERON:0000955,5.79e-29,47;UBERON:0006238,5.79e-29,47;UBERON:0000073,6.68e-29,54;UBERON:0002616,2.96e-27,46;UBERON:0001049,1.34e-25,52;UBERON:0005068,1.34e-25,52;UBERON:0006241,1.34e-25,52;UBERON:0007135,1.34e-25,52;UBERON:0001017,6.05e-25,73;UBERON:0001016,4.28e-24,75;UBERON:0002346,9.55e-24,64;UBERON:0003075,9.55e-24,64;UBERON:0007284,9.55e-24,64;UBERON:0002021,2.24e-23,10;UBERON:0000411,2.24e-23,10;UBERON:0001950,2.24e-23,10;UBERON:0004121,7.08e-21,95;UBERON:0000924,7.08e-21,95;UBERON:0006601,7.08e-21,95;UBERON:0003528,5.11e-20,29;UBERON:0002791,5.11e-20,29;UBERON:0001893,5.11e-20,29;UBERON:0010371,5.16e-20,73;UBERON:0003080,2.64e-19,40;UBERON:0003056,7.13e-19,49;UBERON:0002619,1.58e-18,17;UBERON:0002780,9.51e-18,39;UBERON:0001890,9.51e-18,39;UBERON:0006240,9.51e-18,39;UBERON:0000956,2.95e-17,21;UBERON:0001869,2.95e-17,21;UBERON:0000203,2.95e-17,21;UBERON:0002020,1.79e-16,34;UBERON:0010314,1.55e-14,92;UBERON:0000025,3.65e-11,114;UBERON:0004111,5.97e-11,122;UBERON:0004733,2.59e-10,6;UBERON:0004732,2.59e-10,6;UBERON:0002028,2.59e-10,6;UBERON:0007277,2.59e-10,6;UBERON:0002950,6.66e-09,4;UBERON:0001891,6.66e-09,4;UBERON:0009616,6.66e-09,4;UBERON:0010286,6.66e-09,4;UBERON:0007023,1.15e-08,51;UBERON:0004684,1.46e-07,3;UBERON:0002275,1.46e-07,3;UBERON:0002038,7.48e-07,3;UBERON:0009663,7.48e-07,3;UBERON:0009661,7.48e-07,3;UBERON:0000125,7.48e-07,3;UBERON:0002308,7.48e-07,3;UBERON:0003076,7.69e-07,12;UBERON:0003057,7.69e-07,12
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,3.31668831589172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0.439372365468944,1.1665793944457,0.839918529752175,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.599200221036809,1.15265491596466,0,0,0,0.285650984403804,0.220868540951614,0,0,0,7.70811166995721,3.31987079021488,4.45458946443106,0,0.0914876436024097,0,3.90856198601933,1.12552522006336,2.44477196442896,0.883885756421003,0.142371680799103,0,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0.161766849947409,0.441683036920787,0,0,39.2326267995473,46.0782754989601,0,0,0,0,5.39246301857362,3.20250421973039,0,11.8200537730748,7.16003280524926,5.61027720310812,4.2182728397617,0.305518091550949,1.11966273549084,5.30717792710717,45.8763245832513,0,0,0,0.150704817835715,0.272145996605311,0,0.562210347358373,14.7460921321239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3042074796422,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,7.54587772942622,5.50894926983355,0,0,0,0,0,0,0,0,0,0,0,4.4984984299053,0.567760340833074,0.178065603667255,0.162886959353576,1.31976098378028,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.713475270408282,0.164549020602121,0,0,0,0.441056796109924,0.32977250588296,0,0,0,0,0,4.82105785227325,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.36630324853453,0,3.00943262421218,3.3885110557024,4.14292712856459,6.87474616127276,5.32744865265431,8.90607275701835,12.0863023582352,8.77529250301348,14.8605997063993,14.0474146785103,8.80192529978094,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0,0,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0,0,0,0,0,0.499621155875892,0.233931608445408,0,0,0,0
|short_description=p12@Gramd1b
}}

Revision as of 17:46, 14 September 2013

Short description:p12@Gramd1b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_12_at_Gramd1b_5end
Coexpression cluster:MCL_coexpression_mm9:617
Association with transcript: 103bp_to_ENSMUST00000149492_5end
EntrezGene:Gramd1b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p12@Gramd1b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.32
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B239.23
cerebellum, neonate N30.CNhs11135.1395-42I246.08
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.39
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D511.82
cortex, neonate N30.CNhs11107.1392-42F27.16
diencephalon, adult.CNhs10482.20-12F25.61
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B25.31
eyeball, adult.CNhs10484.31-12G445.88
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A214.75
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E810.30
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C27.55
medulla oblongata, neonate N30.CNhs11200.1396-42A35.51
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.86
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.80
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron1.46e-073
neuron of the substantia nigra7.48e-073

Uber anatomy
Ontology termp-valuen
brain5.79e-2947
future brain5.79e-2947
regional part of nervous system6.68e-2954
regional part of brain2.96e-2746
neural tube1.34e-2552
neural rod1.34e-2552
future spinal cord1.34e-2552
neural keel1.34e-2552
central nervous system6.05e-2573
nervous system4.28e-2475
neurectoderm9.55e-2464
neural plate9.55e-2464
presumptive neural plate9.55e-2464
occipital lobe2.24e-2310
visual cortex2.24e-2310
neocortex2.24e-2310
ectoderm-derived structure7.08e-2195
ectoderm7.08e-2195
presumptive ectoderm7.08e-2195
brain grey matter5.11e-2029
regional part of telencephalon5.11e-2029
telencephalon5.11e-2029
ecto-epithelium5.16e-2073
anterior neural tube2.64e-1940
pre-chordal neural plate7.13e-1949
regional part of cerebral cortex1.58e-1817
regional part of forebrain9.51e-1839
forebrain9.51e-1839
future forebrain9.51e-1839
cerebral cortex2.95e-1721
cerebral hemisphere2.95e-1721
pallium2.95e-1721
gray matter1.79e-1634
structure with developmental contribution from neural crest1.55e-1492
tube3.65e-11114
anatomical conduit5.97e-11122
segmental subdivision of hindbrain2.59e-106
segmental subdivision of nervous system2.59e-106
hindbrain2.59e-106
presumptive hindbrain2.59e-106
regional part of midbrain6.66e-094
midbrain6.66e-094
presumptive midbrain6.66e-094
midbrain neural tube6.66e-094
adult organism1.15e-0851
raphe nuclei1.46e-073
reticular formation1.46e-073
substantia nigra7.48e-073
telencephalic nucleus7.48e-073
midbrain nucleus7.48e-073
neural nucleus7.48e-073
nucleus of brain7.48e-073
posterior neural tube7.69e-0712
chordal neural plate7.69e-0712







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