FFCP PHASE1:Mm9::chr9:115219982..115219995,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68292|HGNC=|UniProt=Q3TDQ1|association_with_transcript=-443bp_to_ENSMUST00000035010,NM_024222,uc009ryp.1_5end|description=CAGE_peak_8_at_Stt3b_5end|id=chr9:115219982..115219995,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,1.09e-09,9;CL:0002251,1.09e-09,9;CL:0000239,1.36e-08,6;CL:0000677,1.36e-08,6;CL:0000584,1.36e-08,6;CL:0000075,3.49e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.09e-09,9;UBERON:0004808,1.09e-09,9;UBERON:0001277,1.09e-09,9;UBERON:0000344,9.18e-08,15;UBERON:0001242,1.30e-07,13;UBERON:0001262,1.30e-07,13;UBERON:0004786,1.30e-07,13;UBERON:0000485,1.52e-07,11|phase1_expression=0,1.74487703819681,3.63999391511629,2.72217790176147,3.50627010962443,2.01455126294268,1.63528848416868,0.129123323441576,2.67498572088167,2.10658073689794,0,0.159544317990673,0.856003649656029,1.04904482902797,0,0.404950534779652,0,1.26184866143295,0.822686601634433,2.12194825899015,0.340173160604279,0.595745707205312,0.261199789138935,1.59992422793407,0.68822784320151,0.57423196411502,2.15380998079537,0.646413698057667,1.52018735565099,0.504060259519861,0.665191531965914,1.27006134691926,0,0,2.3108129580102,0.831173226792462,3.87921776898501,0,0,0.523523743973798,0,0,0.971020706062307,0,0.202753862439029,0.183546752161682,0,0,0.219686182734472,0.777719596297134,0.139986421625363,0,5.03347818173209,2.90144856804538,0,0.771778308107841,0,0,0.606949382578793,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0,0,0,1.14260393761521,1.32521124570968,0,0.191690942036473,0,0,0.255374676170375,0.153606533256243,0.395658863190582,0.640413505216868,0.52091337055676,0.279182999001381,0,0.61119299110724,1.17851434189467,0.854230084794618,0.186399445825301,0.227178579999552,0.0755715601067855,0.579728977403356,0,2.03991400112325,0.539703191637817,0,0.448026887097336,0.421333260395256,0.340860645156116,0,0,0.422530259330042,0,0,0,0.216491041011214,0.760079596425296,0,1.7127581957859,0.517875767294343,0.593768556259299,0.346970653532272,0.608930956624282,0.230615497256059,0.60289056221049,0.352766121407114,0.628332956648377,0.494389935468748,1.15679485535929,0,0.323533699894818,0.220841518460394,0,0,0,0.209446706813455,1.27728527604296,0.359445373517761,1.19980546198682,0,0.149790639404823,0,0.376963056338593,0.173824320192276,0.767146371990992,0.41557608911912,0.486723789203273,0.611036183101898,0.497627882440372,1.26361379216837,1.89397670297827,0.650602214813519,0.919608417733892,0.360124259610698,0.753524089178575,0.272145996605311,0.896796041993948,0.655912071918102,1.03481348295606,0.862271971731369,0.567318240503458,0.879755620819744,0.219195732427575,0,0.696504333044333,0.205782136407943,0.796137067273973,1.40442637462647,0,0,1.03562886267751,0.469052119962192,1.2604344302271,0.473489471170421,0.196764231747404,0.308534225774757,0.465067889500816,0,0.233530684734339,0.329119699826961,0,0,0.292399974850665,0.219550115291051,0.268412837520744,0,0.411618449517138,0.330418782983798,2.3800550999719,0.853153002140936,0,0.77320476793256,0.80673409849337,1.77902435075896,1.52180500890047,0.474529061544512,0.494096864172033,0.251335208800269,0.795825888164603,0.19496408711912,1.79763881730844,0.864552199498777,0.796565093017469,0.758671603812327,1.25673363870702,0,0.610953983535943,0.387904974335251,0.210407459670956,0.69560190836683,0.885660887877613,1.41298855057237,2.22114895059241,0.592905254174298,0.500535317148282,0.786235980452812,1.12431056192427,1.01430060694251,1.68824011826692,2.03700681425136,2.01387296215567,0.162135226775035,1.37280706594041,4.31304619582064,0.744281895337007,0.312037673114561,2.02063102357689,1.25578189465339,0.964887042726734,0,1.13694847062291,0.651859905768103,0.339490171550376,0.469380496577004,0.167506257441816,0.476087281772027,0.390267295715598,0.157635144106191,0,0.478364305972461,0.327726629431476,0.172684981865896,0.144649058581512,1.50791283939272,0,1.47529281905711,0.275936746304732,0.481651769963376,0.468846746368813,0.163934945376675,0.504941854408746,0.315508219416257,0,2.15423397732799,0.238968797952552,0,0.283076530788832,0.404810701674894,0,0.395287777946524,0.321321316421807,1.13552068166615,0.534196811001766,0.488660878060728,0.494910368917606,1.32745138339963,0.728341908464944,0.906970670894253,1.69744571780308,0.590603785761546,0.307435147943927,1.55056975900933,0.363533729477506,0.356497378384721,0,0,1.03135543248187,0.680879211507576,0.18006109403131,0.517434735131018,0.214337035031592,0,1.07021290561242,1.15184314421485,0.913394847343798,0.469343416127421,0.21183207086382,0.441056796109924,1.48397627647332,0.322928853391811,0.301564624640779,0.477489376012546,0.984845398470368,0.291480836629851,0,1.19609616558497,0.206386867963223,0.370389054739423,0,0.410082683163076,0.228778173206523,0,0.419854356970974,0.276399947608848,0,0.632671987162271,1.01659733563424,0.324016022465404,0.627264888043406,0,0.134864346384821,0.24796036717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| ||
|EntrezGene=68292 | |||
|HGNC= | |||
|UniProt=Q3TDQ1 | |||
|association_with_transcript=-443bp_to_ENSMUST00000035010,NM_024222,uc009ryp.1_5end | |||
|description=CAGE_peak_8_at_Stt3b_5end | |||
|id=chr9:115219982..115219995,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.09e-09,9;CL:0002251,1.09e-09,9;CL:0000239,1.36e-08,6;CL:0000677,1.36e-08,6;CL:0000584,1.36e-08,6;CL:0000075,3.49e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.09e-09,9;UBERON:0004808,1.09e-09,9;UBERON:0001277,1.09e-09,9;UBERON:0000344,9.18e-08,15;UBERON:0001242,1.30e-07,13;UBERON:0001262,1.30e-07,13;UBERON:0004786,1.30e-07,13;UBERON:0000485,1.52e-07,11 | |||
|phase1_expression=0,1.74487703819681,3.63999391511629,2.72217790176147,3.50627010962443,2.01455126294268,1.63528848416868,0.129123323441576,2.67498572088167,2.10658073689794,0,0.159544317990673,0.856003649656029,1.04904482902797,0,0.404950534779652,0,1.26184866143295,0.822686601634433,2.12194825899015,0.340173160604279,0.595745707205312,0.261199789138935,1.59992422793407,0.68822784320151,0.57423196411502,2.15380998079537,0.646413698057667,1.52018735565099,0.504060259519861,0.665191531965914,1.27006134691926,0,0,2.3108129580102,0.831173226792462,3.87921776898501,0,0,0.523523743973798,0,0,0.971020706062307,0,0.202753862439029,0.183546752161682,0,0,0.219686182734472,0.777719596297134,0.139986421625363,0,5.03347818173209,2.90144856804538,0,0.771778308107841,0,0,0.606949382578793,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0,0,0,1.14260393761521,1.32521124570968,0,0.191690942036473,0,0,0.255374676170375,0.153606533256243,0.395658863190582,0.640413505216868,0.52091337055676,0.279182999001381,0,0.61119299110724,1.17851434189467,0.854230084794618,0.186399445825301,0.227178579999552,0.0755715601067855,0.579728977403356,0,2.03991400112325,0.539703191637817,0,0.448026887097336,0.421333260395256,0.340860645156116,0,0,0.422530259330042,0,0,0,0.216491041011214,0.760079596425296,0,1.7127581957859,0.517875767294343,0.593768556259299,0.346970653532272,0.608930956624282,0.230615497256059,0.60289056221049,0.352766121407114,0.628332956648377,0.494389935468748,1.15679485535929,0,0.323533699894818,0.220841518460394,0,0,0,0.209446706813455,1.27728527604296,0.359445373517761,1.19980546198682,0,0.149790639404823,0,0.376963056338593,0.173824320192276,0.767146371990992,0.41557608911912,0.486723789203273,0.611036183101898,0.497627882440372,1.26361379216837,1.89397670297827,0.650602214813519,0.919608417733892,0.360124259610698,0.753524089178575,0.272145996605311,0.896796041993948,0.655912071918102,1.03481348295606,0.862271971731369,0.567318240503458,0.879755620819744,0.219195732427575,0,0.696504333044333,0.205782136407943,0.796137067273973,1.40442637462647,0,0,1.03562886267751,0.469052119962192,1.2604344302271,0.473489471170421,0.196764231747404,0.308534225774757,0.465067889500816,0,0.233530684734339,0.329119699826961,0,0,0.292399974850665,0.219550115291051,0.268412837520744,0,0.411618449517138,0.330418782983798,2.3800550999719,0.853153002140936,0,0.77320476793256,0.80673409849337,1.77902435075896,1.52180500890047,0.474529061544512,0.494096864172033,0.251335208800269,0.795825888164603,0.19496408711912,1.79763881730844,0.864552199498777,0.796565093017469,0.758671603812327,1.25673363870702,0,0.610953983535943,0.387904974335251,0.210407459670956,0.69560190836683,0.885660887877613,1.41298855057237,2.22114895059241,0.592905254174298,0.500535317148282,0.786235980452812,1.12431056192427,1.01430060694251,1.68824011826692,2.03700681425136,2.01387296215567,0.162135226775035,1.37280706594041,4.31304619582064,0.744281895337007,0.312037673114561,2.02063102357689,1.25578189465339,0.964887042726734,0,1.13694847062291,0.651859905768103,0.339490171550376,0.469380496577004,0.167506257441816,0.476087281772027,0.390267295715598,0.157635144106191,0,0.478364305972461,0.327726629431476,0.172684981865896,0.144649058581512,1.50791283939272,0,1.47529281905711,0.275936746304732,0.481651769963376,0.468846746368813,0.163934945376675,0.504941854408746,0.315508219416257,0,2.15423397732799,0.238968797952552,0,0.283076530788832,0.404810701674894,0,0.395287777946524,0.321321316421807,1.13552068166615,0.534196811001766,0.488660878060728,0.494910368917606,1.32745138339963,0.728341908464944,0.906970670894253,1.69744571780308,0.590603785761546,0.307435147943927,1.55056975900933,0.363533729477506,0.356497378384721,0,0,1.03135543248187,0.680879211507576,0.18006109403131,0.517434735131018,0.214337035031592,0,1.07021290561242,1.15184314421485,0.913394847343798,0.469343416127421,0.21183207086382,0.441056796109924,1.48397627647332,0.322928853391811,0.301564624640779,0.477489376012546,0.984845398470368,0.291480836629851,0,1.19609616558497,0.206386867963223,0.370389054739423,0,0.410082683163076,0.228778173206523,0,0.419854356970974,0.276399947608848,0,0.632671987162271,1.01659733563424,0.324016022465404,0.627264888043406,0,0.134864346384821,0.247960367176008,0.26175594198403,0.388844919875379,0,2.25477175473676,0.747582730219894,0.827292452285488,0.583353565032143,0.645799117388655,0.506868376472335,0.704143431874524,0.39061315453185,1.15345278868282,2.41584120826006,2.30424005006292,0.948033361884535,0.608175645870493,0.616265742988964,1.29920822977795,1.07416017400489,0.39736270956253,0.480781798079875,0.590758108698309,0.201932899896295,0.304827226619999,0.201652370273681,0.194915761479505,0.384847366561318,0.233753804363138,0,0.221985953374065,0.179427713218951,0,1.15913756419314,0.563047426353546,0.36630324853453,0.428736758158132,4.51414893631827,0,0,0,0,0,0,0,0,0,0,0,0,0.682934423016537,0.243106717068294,0.628839487883947,0.551530525350042,0.666740183404846,1.4422454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| |||
|short_description=p8@Stt3b | |||
}} |
Revision as of 17:05, 14 September 2013
Short description: | p8@Stt3b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Stt3b_5end |
Coexpression cluster: | NA |
Association with transcript: | -443bp_to_ENSMUST00000035010, NM_024222, uc009ryp.1_5end |
EntrezGene: | Stt3b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.09e-09 | 9 |
epithelial cell of alimentary canal | 1.09e-09 | 9 |
brush border epithelial cell | 1.36e-08 | 6 |
gut absorptive cell | 1.36e-08 | 6 |
enterocyte | 1.36e-08 | 6 |
columnar/cuboidal epithelial cell | 3.49e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.09e-09 | 9 |
gastrointestinal system epithelium | 1.09e-09 | 9 |
intestinal epithelium | 1.09e-09 | 9 |
mucosa | 9.18e-08 | 15 |
intestinal mucosa | 1.30e-07 | 13 |
wall of intestine | 1.30e-07 | 13 |
gastrointestinal system mucosa | 1.30e-07 | 13 |
simple columnar epithelium | 1.52e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.