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FFCP PHASE1:Mm9::chr8:83538765..83538841,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=74841|HGNC=|MCL_coexpression_id=623|UniProt=Q8BW70,F6YDG0|association_with_transcript=0bp_to_ENSMUST00000042724,ENSMUST00000166229,NM_027554,uc009mjd.1_5end|description=CAGE_peak_1_at_Usp38_5end|id=chr8:83538765..83538841,-|ontology_enrichment_celltype=CL:0000838!1.72e-07!12;CL:0000542!3.37e-07!13;CL:0000051!3.37e-07!13;CL:0000791!5.34e-07!9;CL:0000789!5.34e-07!9;CL:0002420!5.34e-07!9;CL:0002419!5.34e-07!9;CL:0000790!5.34e-07!9;CL:0000084!7.72e-07!11;CL:0000827!7.72e-07!11|ontology_enrichment_celltype_v019_2=CL:0000838,1.72e-07,12;CL:0000542,3.37e-07,13;CL:0000051,3.37e-07,13;CL:0000791,5.34e-07,9;CL:0000789,5.34e-07,9;CL:0002420,5.34e-07,9;CL:0002419,5.34e-07,9;CL:0000790,5.34e-07,9;CL:0000084,7.72e-07,11;CL:0000827,7.72e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005057!8.58e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0000077,3.92e-08,35|phase1_expression=20.178754735204,28.964958834067,28.2099528421512,21.7774232140918,29.5528480668345,16.4521686473652,15.8856595604957,56.4268923439688,161.625453030113,137.629941477332,25.3402592973747,30.9515976901905,57.8658467167475,65.4778814118291,20.3196954707554,19.8425762042029,11.1929900500503,49.3698288785642,44.4250764882594,44.1365237869951,17.093701320365,25.7163563610293,18.8063848180033,15.1992801653736,19.7291981717766,21.8208146363708,24.9841957772263,18.9614684763582,17.6721780094428,15.1218077855958,11.9734475753865,20.9560122241678,28.2929802288902,0,9.82095507154334,15.6260566636983,12.8626694445293,53.1535171035873,27.346737058333,32.4584721263755,83.528871300404,57.3758207365094,39.3263385955234,11.9601977076798,12.6721164024393,13.5824596599644,7.82391344348039,8.93903141159831,8.5677611266444,11.2769341463084,10.4989816219022,7.18762821824858,60.7373033929006,79.0644734792365,62.5134466404983,11.8339340576536,8.88253663810146,9.7977697532714,14.3644687210314,18.5146842745212,19.0149421051854,7.45457970552091,7.11435836888911,7.64914759689189,6.92206453796882,6.3943210345149,8.38880309451533,9.22123932771731,17.4198548678242,18.3608076131099,18.5085965989216,14.2825492201902,11.9269012113871,17.1487118900936,14.5685115947719,17.4651569455904,18.7196997698961,15.1947932321373,12.595735727012,17.013331117195,15.0039735507952,12.5019208933622,14.7966989470732,14.6318278608237,17.4190002465564,13.258286346315,14.3795397607094,17.335148461753,14.5394291199713,12.1670211771925,23.4790235848359,18.9293252935905,12.2394840067395,21.5881276655127,20.1430689408777,18.3691023709908,19.802663238577,8.69194645148094,9.35229616570328,7.0667914902068,19.5772353489586,7.69958864485907,10.1922095882658,0,8.44315059943735,8.61423542615335,12.6381111253696,23.8644308612835,18.6435276225964,17.9614988268438,15.6136794089522,15.2232739156071,14.9900073216438,13.2635923686308,19.2845479702556,17.9703225601436,30.404981031328,20.0993106118677,21.230653246797,20.0590893934787,25.1759331044849,16.9706338597328,20.5030937339934,25.1791485429931,25.1336048176146,20.1811073614787,29.4745206284564,22.7963037777495,22.2372897377863,20.2217363196511,21.5025283324754,26.1361052394758,21.0327427432655,29.6629930503183,18.90871205492,22.2270530402828,21.9973025916683,24.3837662395782,17.6905930903572,22.5172785798527,17.6963802429277,19.5416788768452,19.2666478891724,19.2902166829715,27.6908551545904,22.163673609279,23.4254311399322,21.9897865128163,16.5987354558289,17.5868654556072,17.9470146647228,18.8508329887714,15.2925987074079,20.5468778248078,27.3690241422565,17.5150154800274,13.3420505589515,15.1835265197682,19.6072814582959,13.8774267598786,15.9477720787145,14.5850269783422,16.8088762265499,13.1832035270761,14.5011086114136,16.9749779667798,20.3887785063711,16.4639132737709,20.0763016894446,20.0284306176496,22.3749914346562,25.8773977742838,25.0287131431798,22.2782655142217,20.1878350621562,25.314534645304,36.3460661282178,15.8670339998127,19.6225190492415,15.7920936865098,17.1393723558384,15.9329984452441,20.4587800337281,16.1691782195675,37.4877958620164,21.7402620235694,21.1121575392226,20.0946036761562,25.3453313254856,25.1669434423182,16.6426298403515,21.5072575114717,13.2767530667157,16.9087798662399,13.5249282807697,16.0884548997798,14.9343415119072,20.7602026875343,20.6783476396321,16.679946721695,15.8568715119789,20.3605320470971,22.5303996586233,17.0182007830416,19.2627815210939,24.5099702499491,20.8945925030158,23.8765388154893,24.4440817710163,19.8510334841059,25.1309601501305,21.4157902286704,15.814502718009,18.6070473834252,16.8500343481863,18.6908369680863,23.5010611713705,28.4641677604387,21.0618636789929,14.9698215298683,19.2298672201591,11.2031756611624,16.8976978767722,17.7556632888325,24.5184950112594,23.2209040950781,22.3841904630791,19.9318220683897,18.656207932926,20.3190510247515,20.0314578964439,17.2132379711999,12.0633027151418,9.24639662491806,24.5882136509518,30.0771053472158,18.4633178485961,15.8235776899474,11.1475762856139,26.5094473564592,12.9358369960665,1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|EntrezGene=74841
|HGNC=
|MCL_coexpression_id=623
|UniProt=Q8BW70,F6YDG0
|association_with_transcript=0bp_to_ENSMUST00000042724,ENSMUST00000166229,NM_027554,uc009mjd.1_5end
|description=CAGE_peak_1_at_Usp38_5end
|id=chr8:83538765..83538841,-
|ontology_enrichment_celltype=CL:0000838!1.72e-07!12;CL:0000542!3.37e-07!13;CL:0000051!3.37e-07!13;CL:0000791!5.34e-07!9;CL:0000789!5.34e-07!9;CL:0002420!5.34e-07!9;CL:0002419!5.34e-07!9;CL:0000790!5.34e-07!9;CL:0000084!7.72e-07!11;CL:0000827!7.72e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000838,1.72e-07,12;CL:0000542,3.37e-07,13;CL:0000051,3.37e-07,13;CL:0000791,5.34e-07,9;CL:0000789,5.34e-07,9;CL:0002420,5.34e-07,9;CL:0002419,5.34e-07,9;CL:0000790,5.34e-07,9;CL:0000084,7.72e-07,11;CL:0000827,7.72e-07,11
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005057!8.58e-07!51
|ontology_enrichment_uberon_v019_2=UBERON:0000077,3.92e-08,35
|phase1_expression=20.178754735204,28.964958834067,28.2099528421512,21.7774232140918,29.5528480668345,16.4521686473652,15.8856595604957,56.4268923439688,161.625453030113,137.629941477332,25.3402592973747,30.9515976901905,57.8658467167475,65.4778814118291,20.3196954707554,19.8425762042029,11.1929900500503,49.3698288785642,44.4250764882594,44.1365237869951,17.093701320365,25.7163563610293,18.8063848180033,15.1992801653736,19.7291981717766,21.8208146363708,24.9841957772263,18.9614684763582,17.6721780094428,15.1218077855958,11.9734475753865,20.9560122241678,28.2929802288902,0,9.82095507154334,15.6260566636983,12.8626694445293,53.1535171035873,27.346737058333,32.4584721263755,83.528871300404,57.3758207365094,39.3263385955234,11.9601977076798,12.6721164024393,13.5824596599644,7.82391344348039,8.93903141159831,8.5677611266444,11.2769341463084,10.4989816219022,7.18762821824858,60.7373033929006,79.0644734792365,62.5134466404983,11.8339340576536,8.88253663810146,9.7977697532714,14.3644687210314,18.5146842745212,19.0149421051854,7.45457970552091,7.11435836888911,7.64914759689189,6.92206453796882,6.3943210345149,8.38880309451533,9.22123932771731,17.4198548678242,18.3608076131099,18.5085965989216,14.2825492201902,11.9269012113871,17.1487118900936,14.5685115947719,17.4651569455904,18.7196997698961,15.1947932321373,12.595735727012,17.013331117195,15.0039735507952,12.5019208933622,14.7966989470732,14.6318278608237,17.4190002465564,13.258286346315,14.3795397607094,17.335148461753,14.5394291199713,12.1670211771925,23.4790235848359,18.9293252935905,12.2394840067395,21.5881276655127,20.1430689408777,18.3691023709908,19.802663238577,8.69194645148094,9.35229616570328,7.0667914902068,19.5772353489586,7.69958864485907,10.1922095882658,0,8.44315059943735,8.61423542615335,12.6381111253696,23.8644308612835,18.6435276225964,17.9614988268438,15.6136794089522,15.2232739156071,14.9900073216438,13.2635923686308,19.2845479702556,17.9703225601436,30.404981031328,20.0993106118677,21.230653246797,20.0590893934787,25.1759331044849,16.9706338597328,20.5030937339934,25.1791485429931,25.1336048176146,20.1811073614787,29.4745206284564,22.7963037777495,22.2372897377863,20.2217363196511,21.5025283324754,26.1361052394758,21.0327427432655,29.6629930503183,18.90871205492,22.2270530402828,21.9973025916683,24.3837662395782,17.6905930903572,22.5172785798527,17.6963802429277,19.5416788768452,19.2666478891724,19.2902166829715,27.6908551545904,22.163673609279,23.4254311399322,21.9897865128163,16.5987354558289,17.5868654556072,17.9470146647228,18.8508329887714,15.2925987074079,20.5468778248078,27.3690241422565,17.5150154800274,13.3420505589515,15.1835265197682,19.6072814582959,13.8774267598786,15.9477720787145,14.5850269783422,16.8088762265499,13.1832035270761,14.5011086114136,16.9749779667798,20.3887785063711,16.4639132737709,20.0763016894446,20.0284306176496,22.3749914346562,25.8773977742838,25.0287131431798,22.2782655142217,20.1878350621562,25.314534645304,36.3460661282178,15.8670339998127,19.6225190492415,15.7920936865098,17.1393723558384,15.9329984452441,20.4587800337281,16.1691782195675,37.4877958620164,21.7402620235694,21.1121575392226,20.0946036761562,25.3453313254856,25.1669434423182,16.6426298403515,21.5072575114717,13.2767530667157,16.9087798662399,13.5249282807697,16.0884548997798,14.9343415119072,20.7602026875343,20.6783476396321,16.679946721695,15.8568715119789,20.3605320470971,22.5303996586233,17.0182007830416,19.2627815210939,24.5099702499491,20.8945925030158,23.8765388154893,24.4440817710163,19.8510334841059,25.1309601501305,21.4157902286704,15.814502718009,18.6070473834252,16.8500343481863,18.6908369680863,23.5010611713705,28.4641677604387,21.0618636789929,14.9698215298683,19.2298672201591,11.2031756611624,16.8976978767722,17.7556632888325,24.5184950112594,23.2209040950781,22.3841904630791,19.9318220683897,18.656207932926,20.3190510247515,20.0314578964439,17.2132379711999,12.0633027151418,9.24639662491806,24.5882136509518,30.0771053472158,18.4633178485961,15.8235776899474,11.1475762856139,26.5094473564592,12.9358369960665,15.2271110275689,16.1567548299599,16.2498782607735,16.4871018820972,12.7384438854975,16.1924280669958,11.6902343164525,12.6492088942888,19.2792789853084,18.4522110770749,17.0942979520565,21.1753047159649,22.7658769702099,19.9117707509944,17.4802058031587,15.1161778482376,17.9174825768103,16.2416041084425,18.1386737286917,20.9326917466259,15.9954840970102,21.746340081468,15.485801138855,23.1920938864997,13.4076206222643,20.4263763452273,18.9064148732876,16.6872702079753,23.3627368184436,17.3793428969428,17.4801441250029,20.8977256164694,19.790221692449,26.2832313031356,30.0801540626625,26.6839361646504,19.4565778470946,29.7094545120466,28.2264488663769,37.602288360988,45.9594519286172,22.4440244204985,16.8737024829564,23.9219233116994,23.5281029478074,19.0750363190803,27.1250578086755,24.7416552175056,22.8778173206523,43.3444996484331,45.2043191005415,46.5733911720908,18.1387417422872,17.3984796469624,14.0290432317526,13.2846569210816,14.8452690170273,16.5955548447095,22.5223458462651,23.3082745145447,19.3699397068182,22.4233903794802,26.0962511496509,17.4744810992099,16.8953697029696,17.5385999884523,19.8340212110929,15.1116993468945,16.0508319216239,18.0730147514461,16.1453437206498,17.1969324858166,20.5346502702105,16.4177103566983,36.6572899928687,17.0289180843738,14.0714011315813,21.1770941453806,22.1993102627677,28.2127523789396,32.4527713703916,28.2086996903442,25.0396795871406,34.1406493814399,33.7767720208416,36.9365368003662,35.9832287734832,37.0499779915574,30.8353321716687,19.0907919901696,22.24903643915,12.927115460034,18.5462010270903,20.4573898241788,21.7950432878045,28.2966260384367,17.5550236412377,23.1548255472997,14.2700823317225,20.0513429703789,18.5601436931183,22.6077231524312,12.8416962556249,20.925697507186,18.0128481289688,13.1411298605419,23.8169743405837,14.2188666190322,18.3551441764474,21.8539015365292,18.7192172142586,13.2056292455629,15.6266982182512,16.4462578573195,19.3672953804561,21.1806678330598,18.4468964587572,17.4900716924265,17.7308760902912,17.3236788819282,17.9270426733634,17.1732052177284,16.1939855036245,20.2797570403497,16.976011400806,20.192209139362,15.7502844543805,15.7719856097291,13.8431128804283,15.7367885365232,17.1508771626148,17.3161259964208,18.4459845203855,18.1098693144045,15.5211129748327,15.8890813199658,13.4674145197857,17.0834426098811,16.5487530390947,13.9138554677694,15.0288735950387,18.9048478761519,26.2301106834843,18.7145286756327,24.9250422696026,23.1458881803301,22.9415075884296,22.02744438394
|short_description=p1@Usp38
}}

Revision as of 16:09, 14 September 2013

Short description:p1@Usp38
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Usp38_5end
Coexpression cluster:MCL_coexpression_mm9:623
Association with transcript: 0bp_to_ENSMUST00000042724, ENSMUST00000166229, NM_027554, uc009mjd.1_5end
EntrezGene:Usp38
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Usp38

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G720.18
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I528.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I628.21
CD326+ enterocyte, pool1.CNhs13542.11848-124I321.78
CD326+ enterocyte, pool2.CNhs13197.11849-124I429.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I716.45
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I815.89
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E956.43
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7161.63
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2137.63
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E625.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F130.95
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E457.87
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E865.48
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A120.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A319.84
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A511.19
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A249.37
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A444.43
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A644.14
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H225.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I918.81
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D115.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D219.73
GP2+ M cell, pool1.CNhs13228.11845-124H921.82
GP2+ M cell, pool2.CNhs13231.11846-124I124.98
GP2+ M cell, pool3.CNhs13240.11847-124I218.96
Ileum epithelium, pool1.CNhs13199.10252-104B917.67
Ileum epithelium, pool2.CNhs13232.10253-104C115.12
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I320.96
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G628.29
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.82
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F615.63
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F712.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G853.15
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H127.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H332.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G983.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H257.38
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H439.33
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D811.96
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.67
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.58
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.94
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.57
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C410.50
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A260.74
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I979.06
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A162.51
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C111.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.80
Mouse Granule cells, donor1.CNhs12131.11713-123C314.36
Mouse Granule cells, donor2.CNhs12357.11731-123E318.51
Mouse Granule cells, donor3.CNhs12108.11636-122C719.01
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.45
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C88.39
Mouse Microglia, donor2.CNhs12634.11736-123E89.22
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D517.42
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F518.36
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D918.51
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.93
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.15
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.57
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D617.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D417.01
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D812.50
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E414.80
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.42
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.26
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.38
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E117.34
Mouse Schwann, donor1.CNhs12507.11728-123D914.54
Mouse Schwann, donor2.CNhs12573.11746-123F912.17
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G323.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.93
Mouse hepatocyte, donor1.CNhs13078.11714-123C412.24
Mouse hepatocyte, donor3.CNhs12615.11637-122C821.59
Mouse hepatocyte, donor6.CNhs13090.11822-124F420.14
Mouse hepatocyte, donor8.CNhs13091.11824-124F618.37
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A719.80
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.07
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.58
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G28.61
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G312.64
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B623.86
accessory axillary lymph node, adult.CNhs10475.1063-29H918.64
adrenal gland, adult.CNhs10508.49-24D717.96
adrenal gland, embryo E14.CNhs11038.406-44C515.61
adrenal gland, embryo E16.CNhs11004.1254-43D615.22
adrenal gland, embryo E17.CNhs11043.1263-45I114.99
adrenal gland, embryo E18.CNhs11026.1262-18F513.26
adrenal gland, neonate N00.CNhs11191.1311-23C119.28
adrenal gland, neonate N25.CNhs11223.1377-27I317.97
amnion, adult pregnant day17.5.CNhs10488.583-22A830.40
aorta, adult.CNhs10498.46-23H120.10
bone (os femoris), adult.CNhs10483.56-12G221.23
bone (os femoris), neonate N02.CNhs11227.1985-43F520.06
bone (os femoris), neonate N16.CNhs11225.1525-43A625.18
bone (os femoris), neonate N20.CNhs11195.1350-25C316.97
cecum, adult.CNhs10467.37-13H420.50
cerebellum, adult.CNhs10494.15-8B225.18
cerebellum, neonate N30.CNhs11135.1395-42I225.13
colon, adult.CNhs10468.36-18H720.18
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C729.47
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D122.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D422.24
corpora quadrigemina, adult.CNhs10501.16-22A420.22
corpus striatum, adult.CNhs10487.19-21D821.50
corpus striatum, neonate N00.CNhs11226.630-43F126.14
cortex, adult.CNhs10473.12-14D521.03
cortex, neonate N30.CNhs11107.1392-42F229.66
diencephalon, adult.CNhs10482.20-12F218.91
diencephalon, neonate N30.CNhs11201.1388-42B222.23
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B122.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A224.38
epididymis, adult.CNhs10490.58-23B217.69
eyeball, adult.CNhs10484.31-12G422.52
eyeball, embryo E12.CNhs11016.345-16C617.70
eyeball, embryo E14.CNhs10521.399-16E219.54
eyeball, embryo E15.CNhs10593.426-16C919.27
eyeball, embryo E17.CNhs11023.1261-18D419.29
eyeball, neonate N00.CNhs11207.633-15C627.69
eyeball, neonate N01.CNhs11140.1532-43E722.16
eyeball, neonate N02.CNhs11205.1551-44G823.43
eyeball, neonate N16.CNhs11188.777-19A221.99
forelimb, embryo E11.CNhs10596.335-25E216.60
forelimb, embryo E12.CNhs10600.359-14H217.59
forelimb, embryo E13.CNhs10589.384-1E217.95
forelimb, embryo E14.CNhs10577.413-26A818.85
forelimb, embryo E15.CNhs11007.437-20E715.29
forelimb, embryo E17.CNhs10598.1517-43C420.55
forelimb, embryo E18.CNhs11008.1520-43B527.37
gonad, embryo E13.CNhs11044.1564-45I617.52
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C813.34
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D215.18
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D519.61
heart, embryo E11.CNhs10586.331-24E913.88
heart, embryo E12.CNhs11015.353-12F515.95
heart, embryo E13.CNhs11013.376-3I914.59
heart, embryo E14.CNhs10597.403-26D416.81
heart, embryo E15.CNhs11017.431-16C813.18
heart, embryo E16.CNhs11021.457-17C614.50
heart, embryo E17.CNhs11025.479-18E516.97
heart, embryo E18.CNhs11030.1283-20G320.39
heart, neonate N00.CNhs11213.639-21E316.46
heart, neonate N03.CNhs11221.1349-25I220.08
heart, neonate N10.CNhs11118.749-24G120.03
heart, neonate N16.CNhs11209.782-15G122.37
heart, neonate N20.CNhs11127.821-26I625.88
heart, neonate N25.CNhs11196.1351-25D325.03
heart, neonate N30.CNhs11202.1390-42D222.28
hippocampus, adult.CNhs10478.13-16E820.19
hippocampus, neonate N00.CNhs11228.627-43G125.31
intestinal mucosa, adult.CNhs10506.860-29I336.35
intestine, adult.CNhs10496.178-9A315.87
intestine, embryo E12.CNhs11019.1251-16I519.62
intestine, embryo E13.CNhs11010.381-16D515.79
intestine, embryo E15.CNhs10602.976-16D817.14
intestine, embryo E16.CNhs10585.463-22H415.93
intestine, embryo E17.CNhs10582.482-18D320.46
intestine, embryo E18.CNhs10526.1289-20F716.17
intestine, neonate N00.CNhs11126.644-26D137.49
intestine, neonate N01.CNhs11192.1322-23E921.74
intestine, neonate N06.CNhs11102.688-20B821.11
intestine, neonate N07.CNhs11095.720-20F220.09
intestine, neonate N10.CNhs11098.755-23A525.35
intestine, neonate N20.CNhs11187.827-18D125.17
intestine, neonate N25.CNhs11121.1352-25E316.64
intestine, neonate N30.CNhs11131.1384-42G121.51
kidney, embryo E14.CNhs10606.411-4I913.28
kidney, embryo E15.CNhs10997.434-16F816.91
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I216.09
kidney, embryo E18.CNhs11001.1288-20C714.93
kidney, neonate N00.CNhs11214.646-21G720.76
kidney, neonate N10.CNhs11206.758-6D520.68
kidney, neonate N20.CNhs11113.832-19I116.68
kidney, neonate N25.CNhs11122.1353-25F315.86
kidney, neonate N30.CNhs11203.1385-42H120.36
liver, adult pregnant day01.CNhs10466.508-5B222.53
liver, embryo E12.CNhs10601.355-15F817.02
liver, embryo E13.CNhs10524.378-3H619.26
liver, embryo E14.CNhs10594.409-16E124.51
liver, embryo E15.CNhs10520.433-16D720.89
liver, embryo E16.CNhs10523.462-17F523.88
liver, embryo E17.CNhs10510.481-18A324.44
liver, embryo E18.CNhs10579.499-43G419.85
liver, neonate N00.CNhs11117.641-24F425.13
liver, neonate N03.CNhs11123.1345-25G221.42
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H218.61
liver, neonate N10.CNhs11115.751-24B916.85
liver, neonate N20.CNhs11220.823-25A318.69
liver, neonate N25.CNhs11198.1368-26H123.50
liver, neonate N30.CNhs11106.1382-42D128.46
lung, adult.CNhs10474.28-22B121.06
lung, embryo E12.CNhs10522.354-16G214.97
lung, embryo E14.CNhs10604.404-26F819.23
lung, embryo E15.CNhs11020.432-17C511.20
lung, embryo E16.CNhs10998.458-17B616.90
lung, embryo E17.CNhs10605.480-44A617.76
lung, embryo E18.CNhs10583.1287-20I624.52
lung, neonate N00.CNhs11224.640-42C623.22
lung, neonate N06.CNhs11212.683-20E522.38
lung, neonate N07.CNhs11111.715-19A319.93
lung, neonate N10.CNhs11219.750-23E618.66
lung, neonate N20.CNhs11109.822-18A420.32
lung, neonate N25.CNhs11119.1359-25C720.03
lung, neonate N30.CNhs11133.1394-42H217.21
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A112.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A19.25
mammary gland, adult lactating day02.CNhs10480.595-22B624.59
mammary gland, adult pregnant day19.CNhs10476.588-5H230.08
medulla oblongata, adult.CNhs10477.17-12C218.46
medulla oblongata, neonate N30.CNhs11200.1396-42A315.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C711.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C226.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E215.23
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E316.16
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.25
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D816.49
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D912.74
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D416.19
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.69
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D612.65
olfactory brain, adult.CNhs10489.18-22I919.28
ovary, adult.CNhs10507.91-2I718.45
ovary, embryo E18.CNhs11040.505-44H717.09
ovary, neonate N00.CNhs11217.1299-22I421.18
oviduct, adult pregnant day01.CNhs10500.988-6G622.77
pancreas, adult.CNhs10486.34-16E419.91
pancreas, embryo E14.CNhs11012.405-44F417.48
pancreas, embryo E15.CNhs11042.1556-45F215.12
pancreas, embryo E16.CNhs11003.460-26E517.92
pancreas, embryo E17.CNhs10599.1558-45G316.24
pancreas, embryo E18.CNhs10580.1535-43I718.14
pancreas, neonate N00.CNhs11105.645-26G920.93
pancreas, neonate N01.CNhs11138.1531-43D716.00
pancreas, neonate N02.CNhs11139.1539-43D821.75
pancreas, neonate N16.CNhs11136.787-43B615.49
pancreas, neonate N25.CNhs11094.1555-45E223.19
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G820.43
pituitary gland, embryo E12.CNhs11018.346-16E618.91
pituitary gland, embryo E13.CNhs11009.370-44C716.69
pituitary gland, embryo E14.CNhs11037.398-44A523.36
pituitary gland, embryo E15.CNhs10592.427-16B917.38
pituitary gland, embryo E16.CNhs11036.449-43F617.48
pituitary gland, embryo E17.CNhs11039.1265-44F520.90
pituitary gland, neonate N00.CNhs11190.1308-22E919.79
placenta, adult pregnant day10.CNhs10472.539-13I726.28
placenta, adult pregnant day17.CNhs10464.577-18G330.08
prostate, adult.CNhs10470.859-1F826.68
skin, adult.CNhs10492.30-1C319.46
skin, neonate N00.CNhs11124.650-25G429.71
skin, neonate N03.CNhs11215.662-22H328.23
skin, neonate N06.CNhs11097.693-20I537.60
skin, neonate N10.CNhs11108.762-6C445.96
small intestine, neonate N16.CNhs11114.790-21I122.44
spinal cord, adult.CNhs10505.24-13C916.87
spleen, adult.CNhs10465.25-2G223.92
spleen, embryo E16.CNhs11035.461-43C123.53
spleen, embryo E18.CNhs11011.1271-21F219.08
spleen, neonate N10.CNhs11116.752-24D127.13
spleen, neonate N20.CNhs11112.824-19H124.74
spleen, neonate N25.CNhs11099.1354-25G322.88
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C643.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C945.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D346.57
stomach, adult.CNhs10503.33-1H618.14
stomach, embryo E12.CNhs10588.356-43E317.40
stomach, embryo E15.CNhs10603.1252-16G814.03
stomach, embryo E16.CNhs11022.459-17D413.28
stomach, embryo E17.CNhs11006.1035-18D514.85
stomach, embryo E18.CNhs10999.1286-20C616.60
stomach, neonate N03.CNhs11193.1340-24B822.52
stomach, neonate N07.CNhs11210.718-18A923.31
stomach, neonate N25.CNhs11104.1355-25E419.37
stomach, neonate N30.CNhs11134.1386-42I122.42
submandibular gland, adult.CNhs10469.59-29C126.10
testis, adult.CNhs10504.57-7G517.47
testis, embryo E13.CNhs11031.389-23F516.90
testis, embryo E15.CNhs11034.443-27C517.54
testis, embryo E16.CNhs11033.470-26G519.83
testis, embryo E17.CNhs11029.486-18I515.11
testis, embryo E18.CNhs11027.503-18G516.05
testis, neonate N00.CNhs11189.1300-22B718.07
testis, neonate N07.CNhs11222.726-26I416.15
testis, neonate N10.CNhs11204.763-44D917.20
testis, neonate N20.CNhs11110.839-18H320.53
testis, neonate N30.CNhs11130.1391-42E216.42
thymus, adult.CNhs10471.38-12B536.66
thymus, embryo E14.CNhs11041.402-44I417.03
thymus, embryo E15.CNhs11005.430-45I214.07
thymus, embryo E16.CNhs11002.456-26C521.18
thymus, embryo E17.CNhs10581.478-18C122.20
thymus, embryo E18.CNhs10595.1273-19G428.21
thymus, neonate N02.CNhs11181.1541-43F832.45
thymus, neonate N03.CNhs11137.2104-43C728.21
thymus, neonate N06.CNhs11197.681-26C425.04
thymus, neonate N07.CNhs11211.713-19D334.14
thymus, neonate N10.CNhs11194.748-24E433.78
thymus, neonate N20.CNhs11186.820-7A236.94
thymus, neonate N25.CNhs11125.1362-25G735.98
thymus, neonate N30.CNhs11132.1393-42G237.05
tongue, adult.CNhs10499.32-1B430.84
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H319.09
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F722.25
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G512.93
urinary bladder, adult.CNhs10481.879-12E418.55
uterus, adult pregnant day19.CNhs10497.590-15F520.46
uterus, adult.CNhs10509.92-27E521.80
vagina, adult.CNhs10502.89-27D528.30
vesicular gland, adult.CNhs10491.51-27F817.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.15
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.05
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.14
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A923.82
whole body, embryo E11.CNhs11014.324-5I814.22
whole body, embryo E12.CNhs10587.857-27C918.36
whole body, embryo E13.CNhs10512.372-23H221.85
whole body, embryo E14.5.CNhs10578.420-27D218.72
whole body, embryo E14.CNhs10519.395-14B113.21
whole body, embryo E16.CNhs10514.453-14F215.63
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G519.37
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G521.18
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G518.45
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G517.49
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G517.73
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G517.32
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G517.93
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G517.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G516.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G520.28
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G516.98
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G520.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.75
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.74
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G517.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G518.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G518.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G515.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G515.89
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G513.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G517.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G516.55
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.03
whole body, embryo E17.5.CNhs10513.490-9F918.90
whole body, embryo E17.CNhs10517.475-3I526.23
whole body, embryo E18.CNhs10516.493-3B318.71
whole body, neonate N00.CNhs10525.657-19C224.93
whole body, neonate N01.CNhs10576.659-23C623.15
whole body, neonate N06.CNhs10515.692-21D122.94
whole body, neonate N10.CNhs10518.761-6B422.03





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell1.72e-0712
lymphocyte3.37e-0713
common lymphoid progenitor3.37e-0713
mature alpha-beta T cell5.34e-079
alpha-beta T cell5.34e-079
immature T cell5.34e-079
mature T cell5.34e-079
immature alpha-beta T cell5.34e-079
T cell7.72e-0711
pro-T cell7.72e-0711

Uber anatomy
Ontology termp-valuen
mixed endoderm/mesoderm-derived structure3.92e-0835







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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