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FFCP PHASE1:Mm9::chr8:75095926..75095958,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=74166|HGNC=|MCL_coexpression_id=14|UniProt=Q3TMP8|association_with_transcript=-43bp_to_ENSMUST00000034244,NM_144534,uc009mgi.2_5end|description=CAGE_peak_1_at_Tmem38a_5end|id=chr8:75095926..75095958,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.88e-10!102;UBERON:0000924!1.88e-10!102;UBERON:0006601!1.88e-10!102;UBERON:0000073!2.43e-10!75;UBERON:0001016!2.43e-10!75;UBERON:0001017!4.79e-10!73;UBERON:0005743!4.79e-10!73;UBERON:0000033!1.91e-08!63;UBERON:0000955!5.79e-08!50;UBERON:0006238!5.79e-08!50;UBERON:0001049!7.19e-08!52;UBERON:0005068!7.19e-08!52;UBERON:0006241!7.19e-08!52;UBERON:0007135!7.19e-08!52;UBERON:0002616!8.97e-08!49;UBERON:0002346!2.70e-07!71;UBERON:0003075!2.70e-07!71;UBERON:0007284!2.70e-07!71;UBERON:0007100!5.24e-07!18;UBERON:0000948!5.24e-07!18;UBERON:0005498!5.24e-07!18;UBERON:0004140!5.24e-07!18;UBERON:0009881!5.24e-07!18;UBERON:0004141!5.24e-07!18;UBERON:0003084!5.24e-07!18;UBERON:0007005!5.24e-07!18;UBERON:0004139!5.24e-07!18;UBERON:0004291!5.24e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.30e-13,92;UBERON:0004121,1.43e-11,95;UBERON:0000924,1.43e-11,95;UBERON:0006601,1.43e-11,95;UBERON:0001016,2.21e-10,75;UBERON:0001017,4.37e-10,73;UBERON:0010371,9.66e-09,73;UBERON:0000073,1.24e-08,54;UBERON:0002346,1.96e-08,64;UBERON:0003075,1.96e-08,64;UBERON:0007284,1.96e-08,64;UBERON:0001049,6.72e-08,52;UBERON:0005068,6.72e-08,52;UBERON:0006241,6.72e-08,52;UBERON:0007135,6.72e-08,52;UBERON:0000955,4.23e-07,47;UBERON:0006238,4.23e-07,47;UBERON:0007100,4.93e-07,18;UBERON:0000948,4.93e-07,18;UBERON:0005498,4.93e-07,18;UBERON:0004140,4.93e-07,18;UBERON:0009881,4.93e-07,18;UBERON:0004141,4.93e-07,18;UBERON:0003084,4.93e-07,18;UBERON:0007005,4.93e-07,18;UBERON:0004139,4.93e-07,18;UBERON:0004291,4.93e-07,18;UBERON:0002616,6.49e-07,46|phase1_expression=2.40223270657191,0,0.454999239389536,1.20985684522732,3.00537437967808,0.33575854382378,0.467225281191051,0.516493293766305,0.422366166455,1.63845168425395,0.34243593645101,0.478632953972018,0.171200729931206,1.04904482902797,0,0.202475267389826,0,0.315462165358238,0.274228867211478,0,8.24919914465377,2.87943758482567,1.04479915655574,0.47997726838022,0.91763712426868,0.57423196411502,0,1.07735616342945,1.14014051673824,0.252030129759931,1.55211357458713,0.635030673459631,1.23012957516914,0,0,0.166234645358492,0.204169356262369,7.95210098400125,4.6880120671428,2.09409497589519,11.1763982725893,6.83045484958446,4.36959317728038,1.38486499773135,1.31790010585369,2.56965453026354,3.12956537739216,14.3896603211095,11.4236815021925,10.4992145500113,4.33957907038624,11.5002051491977,0.167782606057736,0,1.00828139742739,4.3734104126111,4.01146815914259,6.70373719960675,3.84401275633236,3.1739458756322,7.60597684207415,11.5207140903505,8.00365316500025,1.7997994345628,0.988866362566974,4.2628806896766,12.2836045312546,20.3635701820424,2.07379224616955,1.35005938331691,2.52389953621658,17.7103610330358,11.7060326704355,2.57230678351403,1.15014565221884,4.5960939330501,15.4162233399144,26.558966321719,18.4327839907492,4.74790635828698,2.74462930807229,3.12548022334056,20.9387249251036,15.757353080887,16.5022107598955,5.30331453852602,8.82704420954438,7.64237727883732,7.72407171998477,7.78387069099891,1.15945795480671,0.860423876981386,0.679971333707751,1.07940638327563,0,0,110.108425383293,1.53387290320252,1.81850203222008,2.47337702157238,5.0703631119605,2.56652954828636,2.54805239706646,0,1.29894624606728,1.52015919285059,1.01104889002957,14.0446172054444,1.03575153458869,1.33597925158342,2.25530924795977,4.26251669636998,3.92046345335299,2.11011696773672,6.11461277105665,1.13099932196708,1.73036477414062,1.87979163995885,38.9228642857945,87.6776326714958,167.397870992978,97.4599258801796,1.86391761218122,9.66176630138106,11.3101221679266,1.53274233125155,0,0,0.127070227073065,9.43681028250383,10.980014467647,2.51308704225729,17.9039049798045,21.7358138730781,16.4152555202052,14.9261962022337,3.46253837091075,32.5946262998444,0.505445516867349,17.0457903268044,1.17108398666433,3.90833577536904,4.68161537493908,5.87748789559289,5.10273743634959,5.76511741281824,7.58983968933804,17.074422468775,1.07783996466421,3.02569728268511,3.69497360744293,6.79506770525482,2.50242524303038,13.9300866608867,5.96768195583036,2.38841120182192,0,0,0,7.87077935634907,8.20841209933837,10.0834754418168,13.9679393995274,15.1508458445501,16.6608481918369,21.6256568617879,34.3389953791513,45.7720142079304,51.1781133230924,61.8911339578189,92.3373740727297,99.415991449226,105.164505224413,104.009974539288,25.6553737248235,2.6755199218614,0.330418782983798,1.05780226665418,0.639864751605702,1.85789337488351,1.54640953586512,1.61346819698674,1.11189021922435,1.33157938278791,2.84717436926707,0.823494773620054,0.754005626400808,0.795825888164603,1.36474860983384,0.898819408654221,1.72910439899755,1.1948476395262,2.65535061334314,2.5134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|EntrezGene=74166
|HGNC=
|MCL_coexpression_id=14
|UniProt=Q3TMP8
|association_with_transcript=-43bp_to_ENSMUST00000034244,NM_144534,uc009mgi.2_5end
|description=CAGE_peak_1_at_Tmem38a_5end
|id=chr8:75095926..75095958,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.88e-10!102;UBERON:0000924!1.88e-10!102;UBERON:0006601!1.88e-10!102;UBERON:0000073!2.43e-10!75;UBERON:0001016!2.43e-10!75;UBERON:0001017!4.79e-10!73;UBERON:0005743!4.79e-10!73;UBERON:0000033!1.91e-08!63;UBERON:0000955!5.79e-08!50;UBERON:0006238!5.79e-08!50;UBERON:0001049!7.19e-08!52;UBERON:0005068!7.19e-08!52;UBERON:0006241!7.19e-08!52;UBERON:0007135!7.19e-08!52;UBERON:0002616!8.97e-08!49;UBERON:0002346!2.70e-07!71;UBERON:0003075!2.70e-07!71;UBERON:0007284!2.70e-07!71;UBERON:0007100!5.24e-07!18;UBERON:0000948!5.24e-07!18;UBERON:0005498!5.24e-07!18;UBERON:0004140!5.24e-07!18;UBERON:0009881!5.24e-07!18;UBERON:0004141!5.24e-07!18;UBERON:0003084!5.24e-07!18;UBERON:0007005!5.24e-07!18;UBERON:0004139!5.24e-07!18;UBERON:0004291!5.24e-07!18
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.30e-13,92;UBERON:0004121,1.43e-11,95;UBERON:0000924,1.43e-11,95;UBERON:0006601,1.43e-11,95;UBERON:0001016,2.21e-10,75;UBERON:0001017,4.37e-10,73;UBERON:0010371,9.66e-09,73;UBERON:0000073,1.24e-08,54;UBERON:0002346,1.96e-08,64;UBERON:0003075,1.96e-08,64;UBERON:0007284,1.96e-08,64;UBERON:0001049,6.72e-08,52;UBERON:0005068,6.72e-08,52;UBERON:0006241,6.72e-08,52;UBERON:0007135,6.72e-08,52;UBERON:0000955,4.23e-07,47;UBERON:0006238,4.23e-07,47;UBERON:0007100,4.93e-07,18;UBERON:0000948,4.93e-07,18;UBERON:0005498,4.93e-07,18;UBERON:0004140,4.93e-07,18;UBERON:0009881,4.93e-07,18;UBERON:0004141,4.93e-07,18;UBERON:0003084,4.93e-07,18;UBERON:0007005,4.93e-07,18;UBERON:0004139,4.93e-07,18;UBERON:0004291,4.93e-07,18;UBERON:0002616,6.49e-07,46
|phase1_expression=2.40223270657191,0,0.454999239389536,1.20985684522732,3.00537437967808,0.33575854382378,0.467225281191051,0.516493293766305,0.422366166455,1.63845168425395,0.34243593645101,0.478632953972018,0.171200729931206,1.04904482902797,0,0.202475267389826,0,0.315462165358238,0.274228867211478,0,8.24919914465377,2.87943758482567,1.04479915655574,0.47997726838022,0.91763712426868,0.57423196411502,0,1.07735616342945,1.14014051673824,0.252030129759931,1.55211357458713,0.635030673459631,1.23012957516914,0,0,0.166234645358492,0.204169356262369,7.95210098400125,4.6880120671428,2.09409497589519,11.1763982725893,6.83045484958446,4.36959317728038,1.38486499773135,1.31790010585369,2.56965453026354,3.12956537739216,14.3896603211095,11.4236815021925,10.4992145500113,4.33957907038624,11.5002051491977,0.167782606057736,0,1.00828139742739,4.3734104126111,4.01146815914259,6.70373719960675,3.84401275633236,3.1739458756322,7.60597684207415,11.5207140903505,8.00365316500025,1.7997994345628,0.988866362566974,4.2628806896766,12.2836045312546,20.3635701820424,2.07379224616955,1.35005938331691,2.52389953621658,17.7103610330358,11.7060326704355,2.57230678351403,1.15014565221884,4.5960939330501,15.4162233399144,26.558966321719,18.4327839907492,4.74790635828698,2.74462930807229,3.12548022334056,20.9387249251036,15.757353080887,16.5022107598955,5.30331453852602,8.82704420954438,7.64237727883732,7.72407171998477,7.78387069099891,1.15945795480671,0.860423876981386,0.679971333707751,1.07940638327563,0,0,110.108425383293,1.53387290320252,1.81850203222008,2.47337702157238,5.0703631119605,2.56652954828636,2.54805239706646,0,1.29894624606728,1.52015919285059,1.01104889002957,14.0446172054444,1.03575153458869,1.33597925158342,2.25530924795977,4.26251669636998,3.92046345335299,2.11011696773672,6.11461277105665,1.13099932196708,1.73036477414062,1.87979163995885,38.9228642857945,87.6776326714958,167.397870992978,97.4599258801796,1.86391761218122,9.66176630138106,11.3101221679266,1.53274233125155,0,0,0.127070227073065,9.43681028250383,10.980014467647,2.51308704225729,17.9039049798045,21.7358138730781,16.4152555202052,14.9261962022337,3.46253837091075,32.5946262998444,0.505445516867349,17.0457903268044,1.17108398666433,3.90833577536904,4.68161537493908,5.87748789559289,5.10273743634959,5.76511741281824,7.58983968933804,17.074422468775,1.07783996466421,3.02569728268511,3.69497360744293,6.79506770525482,2.50242524303038,13.9300866608867,5.96768195583036,2.38841120182192,0,0,0,7.87077935634907,8.20841209933837,10.0834754418168,13.9679393995274,15.1508458445501,16.6608481918369,21.6256568617879,34.3389953791513,45.7720142079304,51.1781133230924,61.8911339578189,92.3373740727297,99.415991449226,105.164505224413,104.009974539288,25.6553737248235,2.6755199218614,0.330418782983798,1.05780226665418,0.639864751605702,1.85789337488351,1.54640953586512,1.61346819698674,1.11189021922435,1.33157938278791,2.84717436926707,0.823494773620054,0.754005626400808,0.795825888164603,1.36474860983384,0.898819408654221,1.72910439899755,1.1948476395262,2.65535061334314,2.51346727741403,0,3.46207257337034,2.52138233317913,3.15611189506434,2.71917109634306,5.16635517928608,4.86696056308262,4.07210640941942,0.592905254174298,0.333690211432188,0.589676985339609,0.224862112384854,0.608580364165509,0.241177159752417,1.52775511068852,1.15078454980324,1.78348749452539,2.47105271869273,11.5014565221884,1.11642284300551,5.61667811606209,1.26289438973556,5.20252499213545,0,3.8798169934987,1.70542270593436,2.28150967018836,1.52770577197669,1.40814148973101,3.01511263395268,2.38043640886014,5.26860849216057,2.83743259391144,5.3151525515706,5.42146213435456,8.02930242107116,8.28887912956299,4.91806799177139,1.50791283939272,0.54390568381871,1.96705709207614,2.75936746304733,7.54587772942622,8.32202974804643,1.14754461763673,480.452174469922,6.31016438832513,7.02789739733949,5.38558494331997,4.77937595905104,6.68396022247182,3.67999490025482,8.50102473517278,6.42962887404886,5.92931666919785,10.2822821254978,2.98074178937364,5.1639025063504,6.35259141478947,2.47455184458803,1.32745138339963,2.42780636154981,1.209294227859,1.13163047853539,3.2483208216885,2.76691633149535,2.32585463851399,1.09060118843252,7.12994756769443,1.26414703174326,5.27093042874994,4.12542172992747,38.469675450178,1.44048875225048,3.75140182969988,6.64444808597936,15.4286003268778,20.5124140242381,20.5686275752651,38.3625835884395,1.17335854031855,1.48282449604674,4.41056796109924,17.8077153176798,17.115229229766,8.56443533979813,5.49112782414428,5.58079059133208,1.45740418314925,9.27126510052548,0.170870880797853,1.65109494370578,1.66675074632741,0.376736914009382,0.410082683163076,0.228778173206523,0.509935289981566,0.419854356970974,0.276399947608848,2.86401185404534,2.37251995185852,3.65975040828328,1.94409613479242,2.50905955217362,1.74690050996942,3.77620169877498,3.55409859618945,7.0674104335688,1.8146096260851,3.10669656543463,0,3.73791365109947,4.63283773279873,6.61134040369762,7.8787492321416,7.26511339610346,7.04143431874524,5.7289929331338,3.77493639932559,1.20792060413003,43.4925309449377,0.316011120628178,1.62180172232131,1.43795340030758,1.68897069871134,2.32734704367726,2.58285761215644,2.88469078847925,2.21534290761866,1.71642964911851,1.752756553065,1.81487133246313,1.36441033035653,1.15454209968395,2.10378423926824,124.701710988366,3.99574716073316,2.24284641523689,1.84673078000486,7.14801497919105,1.31377732815827,2.38097111547445,2.14368379079066,3.00943262421218,27.1080884456192,23.0162618253588,18.9055519435001,37.1202873862365,21.9226406326606,21.9064230243013,21.6007200074178,25.2179873805563,20.3914084042892,22.7814537170801,0.518936737920883,0.798049746802062,3.07320490357441,8.50873509739029,1.25767897576789,5.33146174505041,29.5588147976148,29.8750832996397,23.4271023002025,26.7859044469625,23.8270541896825,26.7849404768228,28.3733767633744,27.9789916009279,31.4746369876761,29.5302088595506,32.911148568339,37.0385703290314,31.3185284610513,31.3533699886266,20.5721551431249,26.2664193115819,21.4592570952589,20.9298839950553,23.339126343002,23.6920902096694,24.6952763378243,26.0439014323464,28.518863907631,29.1793981262024,32.6246299841479,30.240876089298,31.5107903240661,29.2830629841476,21.0268205969444,17.7365510335942,30.6450407063485,38.4619186746454,82.2539827896027,86.030653456611,113.151503782766
|short_description=p1@Tmem38a
}}

Revision as of 16:05, 14 September 2013

Short description:p1@Tmem38a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tmem38a_5end
Coexpression cluster:MCL_coexpression_mm9:14
Association with transcript: -43bp_to_ENSMUST00000034244, NM_144534, uc009mgi.2_5end
EntrezGene:Tmem38a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tmem38a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.05
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.88
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.57
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C214.39
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B811.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.34
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.37
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.70
Mouse Granule cells, donor1.CNhs12131.11713-123C33.84
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C611.52
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C812.28
Mouse Microglia, donor2.CNhs12634.11736-123E820.36
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F117.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.71
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F326.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.43
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.75
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E420.94
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.50
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.64
Mouse Schwann, donor1.CNhs12507.11728-123D97.72
Mouse Schwann, donor2.CNhs12573.11746-123F97.78
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7110.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.07
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B614.04
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C16.11
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G238.92
bone (os femoris), neonate N02.CNhs11227.1985-43F587.68
bone (os femoris), neonate N16.CNhs11225.1525-43A6167.40
bone (os femoris), neonate N20.CNhs11195.1350-25C397.46
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B29.66
cerebellum, neonate N30.CNhs11135.1395-42I211.31
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A49.44
corpus striatum, adult.CNhs10487.19-21D810.98
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D517.90
cortex, neonate N30.CNhs11107.1392-42F221.74
diencephalon, adult.CNhs10482.20-12F216.42
diencephalon, neonate N30.CNhs11201.1388-42B214.93
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.46
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A232.59
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G417.05
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E23.91
eyeball, embryo E15.CNhs10593.426-16C94.68
eyeball, embryo E17.CNhs11023.1261-18D45.88
eyeball, neonate N00.CNhs11207.633-15C65.10
eyeball, neonate N01.CNhs11140.1532-43E75.77
eyeball, neonate N02.CNhs11205.1551-44G87.59
eyeball, neonate N16.CNhs11188.777-19A217.07
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E23.69
forelimb, embryo E14.CNhs10577.413-26A86.80
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C413.93
forelimb, embryo E18.CNhs11008.1520-43B55.97
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E97.87
heart, embryo E12.CNhs11015.353-12F58.21
heart, embryo E13.CNhs11013.376-3I910.08
heart, embryo E14.CNhs10597.403-26D413.97
heart, embryo E15.CNhs11017.431-16C815.15
heart, embryo E16.CNhs11021.457-17C616.66
heart, embryo E17.CNhs11025.479-18E521.63
heart, embryo E18.CNhs11030.1283-20G334.34
heart, neonate N00.CNhs11213.639-21E345.77
heart, neonate N03.CNhs11221.1349-25I251.18
heart, neonate N10.CNhs11118.749-24G161.89
heart, neonate N16.CNhs11209.782-15G192.34
heart, neonate N20.CNhs11127.821-26I699.42
heart, neonate N25.CNhs11196.1351-25D3105.16
heart, neonate N30.CNhs11202.1390-42D2104.01
hippocampus, adult.CNhs10478.13-16E825.66
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F82.51
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I23.46
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G73.16
kidney, neonate N10.CNhs11206.758-6D52.72
kidney, neonate N20.CNhs11113.832-19I15.17
kidney, neonate N25.CNhs11122.1353-25F34.87
kidney, neonate N30.CNhs11203.1385-42H14.07
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B95.62
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H15.20
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.88
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A63.02
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C65.27
lung, neonate N06.CNhs11212.683-20E52.84
lung, neonate N07.CNhs11111.715-19A35.32
lung, neonate N10.CNhs11219.750-23E65.42
lung, neonate N20.CNhs11109.822-18A48.03
lung, neonate N25.CNhs11119.1359-25C78.29
lung, neonate N30.CNhs11133.1394-42H24.92
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C27.55
medulla oblongata, neonate N30.CNhs11200.1396-42A38.32
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2480.45
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.31
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.03
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.39
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.43
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I910.28
ovary, adult.CNhs10507.91-2I72.98
ovary, embryo E18.CNhs11040.505-44H75.16
ovary, neonate N00.CNhs11217.1299-22I46.35
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G838.47
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C73.75
pituitary gland, embryo E14.CNhs11037.398-44A56.64
pituitary gland, embryo E15.CNhs10592.427-16B915.43
pituitary gland, embryo E16.CNhs11036.449-43F620.51
pituitary gland, embryo E17.CNhs11039.1265-44F520.57
pituitary gland, neonate N00.CNhs11190.1308-22E938.36
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F84.41
skin, adult.CNhs10492.30-1C317.81
skin, neonate N00.CNhs11124.650-25G417.12
skin, neonate N03.CNhs11215.662-22H38.56
skin, neonate N06.CNhs11097.693-20I55.49
skin, neonate N10.CNhs11108.762-6C45.58
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C99.27
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G83.66
stomach, embryo E16.CNhs11022.459-17D41.94
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B83.78
stomach, neonate N07.CNhs11210.718-18A93.55
stomach, neonate N25.CNhs11104.1355-25E47.07
stomach, neonate N30.CNhs11134.1386-42I11.81
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.74
testis, embryo E15.CNhs11034.443-27C54.63
testis, embryo E16.CNhs11033.470-26G56.61
testis, embryo E17.CNhs11029.486-18I57.88
testis, embryo E18.CNhs11027.503-18G57.27
testis, neonate N00.CNhs11189.1300-22B77.04
testis, neonate N07.CNhs11222.726-26I45.73
testis, neonate N10.CNhs11204.763-44D93.77
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E243.49
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F82.88
thymus, neonate N03.CNhs11137.2104-43C72.22
thymus, neonate N06.CNhs11197.681-26C41.72
thymus, neonate N07.CNhs11211.713-19D31.75
thymus, neonate N10.CNhs11194.748-24E41.81
thymus, neonate N20.CNhs11186.820-7A21.36
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G22.10
tongue, adult.CNhs10499.32-1B4124.70
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.24
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E47.15
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A127.11
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A223.02
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.91
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D737.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A421.92
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.91
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A621.60
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A725.22
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A820.39
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A922.78
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D28.51
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F25.33
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G529.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G529.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G523.43
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G526.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G523.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G526.78
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G528.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G527.98
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G531.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G529.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G532.91
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G537.04
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G531.32
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G531.35
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G520.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G526.27
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G521.46
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G520.93
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G523.34
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G523.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G524.70
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G526.04
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G528.52
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G529.18
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G532.62
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G530.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G531.51
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G529.28
whole body, embryo E17.5.CNhs10513.490-9F921.03
whole body, embryo E17.CNhs10517.475-3I517.74
whole body, embryo E18.CNhs10516.493-3B330.65
whole body, neonate N00.CNhs10525.657-19C238.46
whole body, neonate N01.CNhs10576.659-23C682.25
whole body, neonate N06.CNhs10515.692-21D186.03
whole body, neonate N10.CNhs10518.761-6B4113.15





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest3.30e-1392
ectoderm-derived structure1.43e-1195
ectoderm1.43e-1195
presumptive ectoderm1.43e-1195
nervous system2.21e-1075
central nervous system4.37e-1073
ecto-epithelium9.66e-0973
regional part of nervous system1.24e-0854
neurectoderm1.96e-0864
neural plate1.96e-0864
presumptive neural plate1.96e-0864
neural tube6.72e-0852
neural rod6.72e-0852
future spinal cord6.72e-0852
neural keel6.72e-0852
brain4.23e-0747
future brain4.23e-0747
primary circulatory organ4.93e-0718
heart4.93e-0718
primitive heart tube4.93e-0718
primary heart field4.93e-0718
anterior lateral plate mesoderm4.93e-0718
heart tube4.93e-0718
heart primordium4.93e-0718
cardiac mesoderm4.93e-0718
cardiogenic plate4.93e-0718
heart rudiment4.93e-0718
regional part of brain6.49e-0746







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