FFCP PHASE1:Mm9::chr8:27022142..27022160,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16532|HGNC=|MCL_coexpression_id=1|UniProt=D3Z5P2|association_with_transcript=0bp_to_ENSMUST00000120653,uc009lhf.1_5end|description=CAGE_peak_1_at_Kcnu1_5end|id=chr8:27022142..27022160,+|ontology_enrichment_celltype=CL:0000117!4.43e-08!23;CL:0000337!4.43e-08!23;CL:0000540!9.73e-07!33;CL:0000047!9.73e-07!33;CL:0000031!9.73e-07!33;CL:0000404!9.73e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.35e-11,23;CL:0000337,1.35e-11,23;CL:0000540,2.85e-07,33;CL:0000047,2.85e-07,33;CL:0000031,2.85e-07,33;CL:0000404,2.85e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.94e-17!52;UBERON:0005068!1.94e-17!52;UBERON:0006241!1.94e-17!52;UBERON:0007135!1.94e-17!52;UBERON:0002346!4.41e-16!71;UBERON:0003075!4.41e-16!71;UBERON:0007284!4.41e-16!71;UBERON:0002020!8.02e-16!34;UBERON:0000955!2.24e-15!50;UBERON:0006238!2.24e-15!50;UBERON:0003080!3.42e-15!40;UBERON:0000033!7.11e-15!63;UBERON:0001017!7.80e-15!73;UBERON:0005743!7.80e-15!73;UBERON:0002616!9.29e-15!49;UBERON:0003056!1.20e-14!49;UBERON:0002780!1.42e-14!39;UBERON:0001890!1.42e-14!39;UBERON:0006240!1.42e-14!39;UBERON:0000073!4.69e-14!75;UBERON:0001016!4.69e-14!75;UBERON:0004121!6.00e-14!102;UBERON:0000924!6.00e-14!102;UBERON:0006601!6.00e-14!102;UBERON:0002791!1.15e-13!29;UBERON:0003528!1.15e-13!29;UBERON:0001893!1.15e-13!29;UBERON:0000956!1.24e-09!21;UBERON:0001869!1.24e-09!21;UBERON:0000203!1.24e-09!21;UBERON:0000153!6.93e-08!94;UBERON:0002021!9.35e-08!10;UBERON:0000411!9.35e-08!10;UBERON:0001950!9.35e-08!10;UBERON:0002619!1.93e-07!17;UBERON:0000468!3.78e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.43e-25,52;UBERON:0005068,8.43e-25,52;UBERON:0006241,8.43e-25,52;UBERON:0007135,8.43e-25,52;UBERON:0000073,1.04e-24,54;UBERON:0002020,7.32e-24,34;UBERON:0003080,2.75e-22,40;UBERON:0000955,4.21e-22,47;UBERON:0006238,4.21e-22,47;UBERON:0003528,1.60e-21,29;UBERON:0002791,1.60e-21,29;UBERON:0001893,1.60e-21,29;UBERON:0002780,2.65e-21,39;UBERON:0001890,2.65e-21,39;UBERON:0006240,2.65e-21,39;UBERON:0002616,4.03e-21,46;UBERON:0001017,3.74e-20,73;UBERON:0010371,6.60e-20,73;UBERON:0002346,9.36e-20,64;UBERON:0003075,9.36e-20,64;UBERON:0007284,9.36e-20,64;UBERON:0001016,3.41e-19,75;UBERON:0003056,1.81e-18,49;UBERON:0004121,2.94e-16,95;UBERON:0000924,2.94e-16,95;UBERON:0006601,2.94e-16,95;UBERON:0000956,5.27e-15,21;UBERON:0001869,5.27e-15,21;UBERON:0000203,5.27e-15,21;UBERON:0002021,1.55e-11,10;UBERON:0000411,1.55e-11,10;UBERON:0001950,1.55e-11,10;UBERON:0002619,1.85e-11,17;UBERON:0010314,7.02e-11,92;UBERON:0002420,1.08e-07,8;UBERON:0007245,1.08e-07,8;UBERON:0010009,1.08e-07,8;UBERON:0010011,1.08e-07,8;UBERON:0000454,1.08e-07,8|phase1_expression=1.76163731815273,0,0.909998478779072,0.90739263392049,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.639969691173627,0.22940928106717,0,0,0.215471232685889,0.570070258369122,1.26015064879965,0.221730510655305,0,0,0,0,0,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,1.61853168687678,1.05798195854407,0.633831403506179,0.677689064138264,0,0,0,0,0,0,2.07379224616955,2.16009501330705,4.20649922702764,1.14260393761521,0.883474163806454,2.20483438586917,1.34183659425531,0,0,2.42605942361857,2.30409799884365,2.1101806036831,2.10421580285542,2.6045668527838,1.95428099300967,1.12552522006336,2.29197371665215,4.71405736757868,2.42031857358475,2.98239113320481,0,0.302286240427142,0,0,0,0,0,0,0.561777680527007,0.170430322578058,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.29688427812965,0.173485326766136,0.608930956624282,0.461230994512117,1.05505848386836,0.940709657085638,0,0.247194967734374,0.289198713839823,0,0.161766849947409,0,0.969750506270444,0,0.878342391034642,0.41889341362691,0.510914110417183,0,0,0,3.44518470631092,5.03250663100489,2.89005009859588,3.47648640384553,2.55715457330331,3.94797284663164,2.75810147215188,1.12023300235348,0.124406970610093,0,1.89397670297827,0.130120442962704,0.229902104433473,0,0.90422890701429,0.816437989815934,0.768682321709099,0.937017245597288,1.29351685369508,0.862271971731369,1.51284864134255,1.05570674498369,1.31517439456545,1.66828349535359,1.0447564995665,3.08673204611915,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.462801338662135,0,0.268273401399619,0.233530684734339,0,0,0.162137619091711,0,0,0.134206418760372,4.41608891984667,4.32199371992995,0,0,0.853153002140936,0.928946687441754,0.257734922644187,1.21010114774006,0,0.760902504450237,0.474529061544512,0,0.502670417600539,0.596869416123452,0,0,0.648414149624083,0.398282546508734,0,0.228497025219458,0,0.203651327845314,0.581857461502877,0.49095073923223,1.26473074248515,1.32849133181642,1.72698600625512,0.740382983530803,0,0.166845105716094,0,0.224862112384854,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0.37898282354097,0.651859905768103,0.678980343100753,0.704070744865506,0.502518772325447,0.714130922658041,0.58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| ||
|EntrezGene=16532 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=D3Z5P2 | |||
|association_with_transcript=0bp_to_ENSMUST00000120653,uc009lhf.1_5end | |||
|description=CAGE_peak_1_at_Kcnu1_5end | |||
|id=chr8:27022142..27022160,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.43e-08!23;CL:0000337!4.43e-08!23;CL:0000540!9.73e-07!33;CL:0000047!9.73e-07!33;CL:0000031!9.73e-07!33;CL:0000404!9.73e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.35e-11,23;CL:0000337,1.35e-11,23;CL:0000540,2.85e-07,33;CL:0000047,2.85e-07,33;CL:0000031,2.85e-07,33;CL:0000404,2.85e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.94e-17!52;UBERON:0005068!1.94e-17!52;UBERON:0006241!1.94e-17!52;UBERON:0007135!1.94e-17!52;UBERON:0002346!4.41e-16!71;UBERON:0003075!4.41e-16!71;UBERON:0007284!4.41e-16!71;UBERON:0002020!8.02e-16!34;UBERON:0000955!2.24e-15!50;UBERON:0006238!2.24e-15!50;UBERON:0003080!3.42e-15!40;UBERON:0000033!7.11e-15!63;UBERON:0001017!7.80e-15!73;UBERON:0005743!7.80e-15!73;UBERON:0002616!9.29e-15!49;UBERON:0003056!1.20e-14!49;UBERON:0002780!1.42e-14!39;UBERON:0001890!1.42e-14!39;UBERON:0006240!1.42e-14!39;UBERON:0000073!4.69e-14!75;UBERON:0001016!4.69e-14!75;UBERON:0004121!6.00e-14!102;UBERON:0000924!6.00e-14!102;UBERON:0006601!6.00e-14!102;UBERON:0002791!1.15e-13!29;UBERON:0003528!1.15e-13!29;UBERON:0001893!1.15e-13!29;UBERON:0000956!1.24e-09!21;UBERON:0001869!1.24e-09!21;UBERON:0000203!1.24e-09!21;UBERON:0000153!6.93e-08!94;UBERON:0002021!9.35e-08!10;UBERON:0000411!9.35e-08!10;UBERON:0001950!9.35e-08!10;UBERON:0002619!1.93e-07!17;UBERON:0000468!3.78e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.43e-25,52;UBERON:0005068,8.43e-25,52;UBERON:0006241,8.43e-25,52;UBERON:0007135,8.43e-25,52;UBERON:0000073,1.04e-24,54;UBERON:0002020,7.32e-24,34;UBERON:0003080,2.75e-22,40;UBERON:0000955,4.21e-22,47;UBERON:0006238,4.21e-22,47;UBERON:0003528,1.60e-21,29;UBERON:0002791,1.60e-21,29;UBERON:0001893,1.60e-21,29;UBERON:0002780,2.65e-21,39;UBERON:0001890,2.65e-21,39;UBERON:0006240,2.65e-21,39;UBERON:0002616,4.03e-21,46;UBERON:0001017,3.74e-20,73;UBERON:0010371,6.60e-20,73;UBERON:0002346,9.36e-20,64;UBERON:0003075,9.36e-20,64;UBERON:0007284,9.36e-20,64;UBERON:0001016,3.41e-19,75;UBERON:0003056,1.81e-18,49;UBERON:0004121,2.94e-16,95;UBERON:0000924,2.94e-16,95;UBERON:0006601,2.94e-16,95;UBERON:0000956,5.27e-15,21;UBERON:0001869,5.27e-15,21;UBERON:0000203,5.27e-15,21;UBERON:0002021,1.55e-11,10;UBERON:0000411,1.55e-11,10;UBERON:0001950,1.55e-11,10;UBERON:0002619,1.85e-11,17;UBERON:0010314,7.02e-11,92;UBERON:0002420,1.08e-07,8;UBERON:0007245,1.08e-07,8;UBERON:0010009,1.08e-07,8;UBERON:0010011,1.08e-07,8;UBERON:0000454,1.08e-07,8 | |||
|phase1_expression=1.76163731815273,0,0.909998478779072,0.90739263392049,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.639969691173627,0.22940928106717,0,0,0.215471232685889,0.570070258369122,1.26015064879965,0.221730510655305,0,0,0,0,0,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,1.61853168687678,1.05798195854407,0.633831403506179,0.677689064138264,0,0,0,0,0,0,2.07379224616955,2.16009501330705,4.20649922702764,1.14260393761521,0.883474163806454,2.20483438586917,1.34183659425531,0,0,2.42605942361857,2.30409799884365,2.1101806036831,2.10421580285542,2.6045668527838,1.95428099300967,1.12552522006336,2.29197371665215,4.71405736757868,2.42031857358475,2.98239113320481,0,0.302286240427142,0,0,0,0,0,0,0.561777680527007,0.170430322578058,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.29688427812965,0.173485326766136,0.608930956624282,0.461230994512117,1.05505848386836,0.940709657085638,0,0.247194967734374,0.289198713839823,0,0.161766849947409,0,0.969750506270444,0,0.878342391034642,0.41889341362691,0.510914110417183,0,0,0,3.44518470631092,5.03250663100489,2.89005009859588,3.47648640384553,2.55715457330331,3.94797284663164,2.75810147215188,1.12023300235348,0.124406970610093,0,1.89397670297827,0.130120442962704,0.229902104433473,0,0.90422890701429,0.816437989815934,0.768682321709099,0.937017245597288,1.29351685369508,0.862271971731369,1.51284864134255,1.05570674498369,1.31517439456545,1.66828349535359,1.0447564995665,3.08673204611915,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.462801338662135,0,0.268273401399619,0.233530684734339,0,0,0.162137619091711,0,0,0.134206418760372,4.41608891984667,4.32199371992995,0,0,0.853153002140936,0.928946687441754,0.257734922644187,1.21010114774006,0,0.760902504450237,0.474529061544512,0,0.502670417600539,0.596869416123452,0,0,0.648414149624083,0.398282546508734,0,0.228497025219458,0,0.203651327845314,0.581857461502877,0.49095073923223,1.26473074248515,1.32849133181642,1.72698600625512,0.740382983530803,0,0.166845105716094,0,0.224862112384854,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0.37898282354097,0.651859905768103,0.678980343100753,0.704070744865506,0.502518772325447,0.714130922658041,0.585400943573396,0.157635144106191,0.664394068946325,0.956728611944923,0.327726629431476,0.518054945597687,0.144649058581512,0,0,0,0,3.53211297973142,3.98519734413491,0.327869890753351,0.252470927204373,0.631016438832513,0.780877488593277,0.430846795465598,0,0.668396022247182,0.566153061577665,0,0.292255857911312,0.790575555893047,3.53453448063988,1.27746076687442,1.42452482933804,1.46598263418218,2.47455184458803,1.32745138339963,0.971122544619926,1.209294227859,0.754420319023592,0.295301892880773,0.307435147943927,1.55056975900933,0.727067458955011,0.712994756769443,0.632073515871632,1.05418608574999,0,4.42571487479924,0.18006109403131,0.129358683782755,0,2.12808280370728,1.42695054081656,0.987294123612726,0.913394847343798,0.469343416127421,0.42366414172764,0.661585194164886,2.63818004706368,0.968786560175433,1.26657142349127,1.55184047204077,0.984845398470368,0.291480836629851,5.37733375830478,0,0.412773735926445,0.555583582109135,0,0,0.228778173206523,0.169978429993855,0,0,0,0,0.609958401380546,0.216010681643603,0.627264888043406,0.218362563746178,0.944050424693745,0,0.26175594198403,0,0,2.25477175473676,1.64468200648377,0.496375471371293,1.36115831840833,1.42075805825504,2.36538575687089,1.76035857968631,1.17183946359555,0.629156066554265,0.724752362478018,0.288030006257865,0,1.01362607645082,0.308132871494482,0.25984164595559,0,0.198681354781265,0,0,0,0.15241361331,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.680191150845634,0.443971906748129,0.0897138566094757,0,0.579568782096571,0.375364950902364,1.64836461840539,1.07184189539533,0.501572104035363,3.3885110557024,3.68260189205742,4.01026859407578,3.43706364687375,4.11049511862385,3.7769694869485,5.40018000185445,5.40385443869065,3.17199686288943,2.07104124700728,0,1.19707462020309,1.02440163452481,0.486213434136588,1.25767897576789,0.919217542250071,1.55572709461131,1.03017528619447,0.64183841918363,0.252697211763798,1.77435509923168,0.565879024158229,1.21733959710847,1.21647789569252,0.976402972245426,0.476293691283074,0.927074607558844,0.964546102318525,1.23625770240992,0.588795680537589,2.05721551431249,1.24233064311536,1.1921809497366,0.436039249896986,0.846984423737976,0.930760686808441,0.914639864363863,0.263069711437843,0.814824683075171,1.12228454331548,0.711810108745045,0.788035859004508,0.409231043169689,1.08455788830176,1.54325288784913,1.24905288968973,1.16965804222704,0,1.14772999241306,0.882365676478062,0 | |||
|short_description=p1@Kcnu1 | |||
}} |
Revision as of 15:26, 14 September 2013
Short description: | p1@Kcnu1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kcnu1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000120653, uc009lhf.1_5end |
EntrezGene: | Kcnu1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.35e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.35e-11 | 23 |
neuron | 2.85e-07 | 33 |
neuronal stem cell | 2.85e-07 | 33 |
neuroblast | 2.85e-07 | 33 |
electrically signaling cell | 2.85e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.