FFCP PHASE1:Mm9::chr8:119517339..119517356,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68133|HGNC=|MCL_coexpression_id=8|UniProt=Q9CY75|association_with_transcript=0bp_to_NM_026572,uc009not.1_5end|description=CAGE_peak_2_at_Gcsh_5end|id=chr8:119517339..119517356,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!2.01e-10!49;UBERON:0005173!2.01e-10!49;UBERON:0002417!2.01e-10!49;UBERON:0000916!2.01e-10!49;UBERON:0002365!3.92e-10!25;UBERON:0002330!3.92e-10!25;UBERON:0002107!6.01e-10!22;UBERON:0007499!6.01e-10!22;UBERON:0006925!6.01e-10!22;UBERON:0009497!6.01e-10!22;UBERON:0000015!6.01e-10!22;UBERON:0002423!6.01e-10!22;UBERON:0006235!6.01e-10!22;UBERON:0008835!6.01e-10!22;UBERON:0003894!6.01e-10!22;UBERON:0004161!6.01e-10!22;UBERON:0008836!6.01e-10!22;UBERON:0009854!3.10e-09!23;UBERON:0009856!3.10e-09!23;UBERON:0005256!2.97e-08!47;UBERON:0005177!2.64e-07!85;UBERON:0002100!5.14e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0003104,4.37e-11,61;UBERON:0009142,4.37e-11,61;UBERON:0005172,2.10e-10,49;UBERON:0005173,2.10e-10,49;UBERON:0002417,2.10e-10,49;UBERON:0000916,2.10e-10,49;UBERON:0002365,3.91e-10,25;UBERON:0002330,3.91e-10,25;UBERON:0002107,6.00e-10,22;UBERON:0007499,6.00e-10,22;UBERON:0006925,6.00e-10,22;UBERON:0009497,6.00e-10,22;UBERON:0000015,6.00e-10,22;UBERON:0002423,6.00e-10,22;UBERON:0006235,6.00e-10,22;UBERON:0008835,6.00e-10,22;UBERON:0003894,6.00e-10,22;UBERON:0004161,6.00e-10,22;UBERON:0008836,6.00e-10,22;UBERON:0009854,3.10e-09,23;UBERON:0009856,3.10e-09,23;UBERON:0005256,1.96e-08,45;UBERON:0005177,2.93e-08,79;UBERON:0002100,6.97e-08,90|phase1_expression=7.52699581392532,2.79180326111489,4.54999239389536,3.93203474698879,7.01254021924886,6.04365378882803,5.13947809310157,1.03298658753261,22.385406822115,24.5767752638093,7.53359060192222,9.4131147614497,0.342401459862411,0.874204024189974,0.666219523631325,0.809901069559304,0,0.630924330716475,1.37114433605739,0,12.246233781754,2.48227378002213,2.61199789138935,5.27974995218242,4.35877634027623,9.76194338995534,9.47676391549965,7.75696437669201,10.4512880701006,9.8291750606373,8.20402889424627,3.17515336729816,3.69038872550742,0,13.5760261283099,14.1299448554718,15.1085323634153,0,1.5626706890476,1.0470474879476,0,0,0.971020706062307,9.56815816614387,8.71841608487825,6.60768307782054,2.34717403304412,6.97680500417429,16.0370913396164,10.304784650937,6.57936181639204,10.062679505548,1.34226084846189,2.17608642603403,1.00828139742739,15.4355661621568,9.74213695791773,35.0657022748661,3.23706337375356,1.5869729378161,0,8.13226876965917,3.55717918444456,1.7997994345628,3.9554654502679,1.4209602298922,5.09320187881288,9.98967593836042,1.76272340924412,2.29510095163874,2.73422449756797,4.28476476605705,4.19650227808066,2.57230678351403,2.49198224647415,0,3.30347642998166,2.68143409978894,2.76491759861238,0.527545150920775,1.9212405156506,2.6045668527838,4.74611098302348,9.00420176050688,6.57032465440283,5.30331453852602,3.98640706237488,2.42319279572891,7.34544075331885,4.53429360640713,3.18850937571846,47.3233132339763,38.078394687634,53.9703191637817,76.0238408413773,58.691522209751,17.1342192560737,6.30592193538814,7.01422212427746,4.94675404314476,5.0703631119605,5.13305909657271,7.64415719119937,0,5.19578498426914,6.84071636782766,4.04419556011827,26.604843974541,1.29468941823586,11.4300447079915,6.41895709034703,13.0920155674221,8.99400439298628,14.6200961336044,9.8774513993992,14.2003248202533,2.47194967734374,29.9320668824217,1.76922110389975,5.82360659810673,4.19598885074748,5.81850303762267,3.72783522436244,3.80615036115011,2.30391377494801,5.8755122697976,9.58520996047362,5.39912457894067,9.40319680340679,4.94309110035915,4.11750542536764,3.14135880282161,4.86708096538374,3.06858548796397,6.2336413367868,6.48965052271031,4.27725328171328,9.20611582514688,30.0740082536073,4.20883711772948,9.23855145035196,6.89706313300419,4.86167750474443,5.72678307775717,6.32739442107349,4.86832137082429,5.43470002446427,5.17406741478031,4.31135985865684,2.08016688184601,2.46331573829528,2.19195732427575,3.05851974148158,2.43776516565517,3.49829631893504,5.57295947091781,9.12877143507205,5.1469581422943,7.10408748488982,2.27838349789052,4.45599513964083,3.96136535214233,3.07768156260773,3.54175617145327,3.39387648352232,3.48800917125612,4.02410102099429,3.38619492864792,4.77223564749093,5.91002870684743,5.51267904911819,4.23979963533464,5.70830299756732,5.63666958793561,2.3131894342054,2.77842453424068,2.97376904685418,4.7601101999438,8.31824177087412,5.10920678092965,5.92790322081629,7.46229041106367,9.56225588532942,10.6526350623033,4.74529061544512,12.6818195137488,9.55073793441024,8.35617182572834,5.65395852645448,4.49409704327111,6.26800344636613,8.16479220342906,7.58671603812327,12.3388393618507,14.6520056375005,23.0126000465205,21.9166310499417,28.3348712356887,21.8166053078688,30.407690483798,55.7345483836881,44.6697733396918,51.2863044860768,5.6727335943472,7.66580080941492,6.74586337154561,10.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| ||
|EntrezGene=68133 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=Q9CY75 | |||
|association_with_transcript=0bp_to_NM_026572,uc009not.1_5end | |||
|description=CAGE_peak_2_at_Gcsh_5end | |||
|id=chr8:119517339..119517356,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!2.01e-10!49;UBERON:0005173!2.01e-10!49;UBERON:0002417!2.01e-10!49;UBERON:0000916!2.01e-10!49;UBERON:0002365!3.92e-10!25;UBERON:0002330!3.92e-10!25;UBERON:0002107!6.01e-10!22;UBERON:0007499!6.01e-10!22;UBERON:0006925!6.01e-10!22;UBERON:0009497!6.01e-10!22;UBERON:0000015!6.01e-10!22;UBERON:0002423!6.01e-10!22;UBERON:0006235!6.01e-10!22;UBERON:0008835!6.01e-10!22;UBERON:0003894!6.01e-10!22;UBERON:0004161!6.01e-10!22;UBERON:0008836!6.01e-10!22;UBERON:0009854!3.10e-09!23;UBERON:0009856!3.10e-09!23;UBERON:0005256!2.97e-08!47;UBERON:0005177!2.64e-07!85;UBERON:0002100!5.14e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,4.37e-11,61;UBERON:0009142,4.37e-11,61;UBERON:0005172,2.10e-10,49;UBERON:0005173,2.10e-10,49;UBERON:0002417,2.10e-10,49;UBERON:0000916,2.10e-10,49;UBERON:0002365,3.91e-10,25;UBERON:0002330,3.91e-10,25;UBERON:0002107,6.00e-10,22;UBERON:0007499,6.00e-10,22;UBERON:0006925,6.00e-10,22;UBERON:0009497,6.00e-10,22;UBERON:0000015,6.00e-10,22;UBERON:0002423,6.00e-10,22;UBERON:0006235,6.00e-10,22;UBERON:0008835,6.00e-10,22;UBERON:0003894,6.00e-10,22;UBERON:0004161,6.00e-10,22;UBERON:0008836,6.00e-10,22;UBERON:0009854,3.10e-09,23;UBERON:0009856,3.10e-09,23;UBERON:0005256,1.96e-08,45;UBERON:0005177,2.93e-08,79;UBERON:0002100,6.97e-08,90 | |||
|phase1_expression=7.52699581392532,2.79180326111489,4.54999239389536,3.93203474698879,7.01254021924886,6.04365378882803,5.13947809310157,1.03298658753261,22.385406822115,24.5767752638093,7.53359060192222,9.4131147614497,0.342401459862411,0.874204024189974,0.666219523631325,0.809901069559304,0,0.630924330716475,1.37114433605739,0,12.246233781754,2.48227378002213,2.61199789138935,5.27974995218242,4.35877634027623,9.76194338995534,9.47676391549965,7.75696437669201,10.4512880701006,9.8291750606373,8.20402889424627,3.17515336729816,3.69038872550742,0,13.5760261283099,14.1299448554718,15.1085323634153,0,1.5626706890476,1.0470474879476,0,0,0.971020706062307,9.56815816614387,8.71841608487825,6.60768307782054,2.34717403304412,6.97680500417429,16.0370913396164,10.304784650937,6.57936181639204,10.062679505548,1.34226084846189,2.17608642603403,1.00828139742739,15.4355661621568,9.74213695791773,35.0657022748661,3.23706337375356,1.5869729378161,0,8.13226876965917,3.55717918444456,1.7997994345628,3.9554654502679,1.4209602298922,5.09320187881288,9.98967593836042,1.76272340924412,2.29510095163874,2.73422449756797,4.28476476605705,4.19650227808066,2.57230678351403,2.49198224647415,0,3.30347642998166,2.68143409978894,2.76491759861238,0.527545150920775,1.9212405156506,2.6045668527838,4.74611098302348,9.00420176050688,6.57032465440283,5.30331453852602,3.98640706237488,2.42319279572891,7.34544075331885,4.53429360640713,3.18850937571846,47.3233132339763,38.078394687634,53.9703191637817,76.0238408413773,58.691522209751,17.1342192560737,6.30592193538814,7.01422212427746,4.94675404314476,5.0703631119605,5.13305909657271,7.64415719119937,0,5.19578498426914,6.84071636782766,4.04419556011827,26.604843974541,1.29468941823586,11.4300447079915,6.41895709034703,13.0920155674221,8.99400439298628,14.6200961336044,9.8774513993992,14.2003248202533,2.47194967734374,29.9320668824217,1.76922110389975,5.82360659810673,4.19598885074748,5.81850303762267,3.72783522436244,3.80615036115011,2.30391377494801,5.8755122697976,9.58520996047362,5.39912457894067,9.40319680340679,4.94309110035915,4.11750542536764,3.14135880282161,4.86708096538374,3.06858548796397,6.2336413367868,6.48965052271031,4.27725328171328,9.20611582514688,30.0740082536073,4.20883711772948,9.23855145035196,6.89706313300419,4.86167750474443,5.72678307775717,6.32739442107349,4.86832137082429,5.43470002446427,5.17406741478031,4.31135985865684,2.08016688184601,2.46331573829528,2.19195732427575,3.05851974148158,2.43776516565517,3.49829631893504,5.57295947091781,9.12877143507205,5.1469581422943,7.10408748488982,2.27838349789052,4.45599513964083,3.96136535214233,3.07768156260773,3.54175617145327,3.39387648352232,3.48800917125612,4.02410102099429,3.38619492864792,4.77223564749093,5.91002870684743,5.51267904911819,4.23979963533464,5.70830299756732,5.63666958793561,2.3131894342054,2.77842453424068,2.97376904685418,4.7601101999438,8.31824177087412,5.10920678092965,5.92790322081629,7.46229041106367,9.56225588532942,10.6526350623033,4.74529061544512,12.6818195137488,9.55073793441024,8.35617182572834,5.65395852645448,4.49409704327111,6.26800344636613,8.16479220342906,7.58671603812327,12.3388393618507,14.6520056375005,23.0126000465205,21.9166310499417,28.3348712356887,21.8166053078688,30.407690483798,55.7345483836881,44.6697733396918,51.2863044860768,5.6727335943472,7.66580080941492,6.74586337154561,10.9544465549792,12.7823894668781,24.4440817710163,15.247895284893,19.1319567594542,69.4640375365846,69.0087391331302,61.7753973129716,89.8668498569934,79.057188797446,71.9383628222868,44.3848039654298,1.47802552133284,4.54779388249163,4.88894929326078,6.28056817368196,3.75504397261603,2.34508760418542,3.57065461329021,2.53673742215138,3.62560831444239,2.6575762757853,3.34855014180723,1.96635977658886,2.59027472798843,1.44649058581512,6.03165135757089,18.4927932498361,25.0799779239708,16.5562047782839,8.34863067936518,9.25972324078405,13.4426655208874,12.1186045058099,2.83957397474631,3.12350995437311,5.17016154558717,3.82350076724083,1.55959071857676,2.83076530788832,2.83367491172426,4.38383786866968,3.95287777946523,4.4984984299053,4.68402281187286,4.80777129901589,2.60619134965722,2.3095817216155,15.9294166007955,23.5497217070332,14.511530734308,22.8212146504637,14.7650946440386,14.1420168054207,7.75284879504663,19.2672876623078,17.1118741624666,12.6414703174326,16.8669773719998,15.470331487228,1.36175842301515,6.12207719706455,3.62204314591713,6.64444808597936,1.95074257006501,2.49716344642899,1.48094118541909,3.65357938937519,12.2029288193129,2.96564899209348,3.96951116498931,2.96795255294664,1.93757312035087,4.34253059482722,3.9392873521035,2.9545361954111,4.66369338607761,8.15871328846243,2.05045056957423,5.36605856704379,3.1483069652851,1.69531611304222,1.36694227721025,0.686334519619568,22.4371527591889,15.6745626602497,15.7547970137043,13.3653886522116,3.79603192297362,4.26970880966382,9.18045396985311,9.82714991268003,16.3771922809633,9.97996163247673,12.4806718145257,4.18809507174447,8.55458823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| |||
|short_description=p2@Gcsh | |||
}} |
Revision as of 14:52, 14 September 2013
Short description: | p2@Gcsh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gcsh_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_NM_026572, uc009not.1_5end |
EntrezGene: | Gcsh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchyme | 4.37e-11 | 61 |
entire embryonic mesenchyme | 4.37e-11 | 61 |
abdomen element | 2.10e-10 | 49 |
abdominal segment element | 2.10e-10 | 49 |
abdominal segment of trunk | 2.10e-10 | 49 |
abdomen | 2.10e-10 | 49 |
exocrine gland | 3.91e-10 | 25 |
exocrine system | 3.91e-10 | 25 |
liver | 6.00e-10 | 22 |
epithelial sac | 6.00e-10 | 22 |
digestive gland | 6.00e-10 | 22 |
epithelium of foregut-midgut junction | 6.00e-10 | 22 |
anatomical boundary | 6.00e-10 | 22 |
hepatobiliary system | 6.00e-10 | 22 |
foregut-midgut junction | 6.00e-10 | 22 |
hepatic diverticulum | 6.00e-10 | 22 |
liver primordium | 6.00e-10 | 22 |
septum transversum | 6.00e-10 | 22 |
liver bud | 6.00e-10 | 22 |
digestive tract diverticulum | 3.10e-09 | 23 |
sac | 3.10e-09 | 23 |
trunk mesenchyme | 1.96e-08 | 45 |
trunk region element | 2.93e-08 | 79 |
trunk | 6.97e-08 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.