FFCP PHASE1:Mm9::chr8:107800338..107800382,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=78688|HGNC=|MCL_coexpression_id=311|UniProt=Q9D1X0,Q53YU5|association_with_transcript=0bp_to_ENSMUST00000014920,NM_030152,uc009ncd.1_5end|description=CAGE_peak_1_at_Nol3_5end|id=chr8:107800338..107800382,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!6.41e-10!102;UBERON:0000924!6.41e-10!102;UBERON:0006601!6.41e-10!102;UBERON:0000073!4.54e-08!75;UBERON:0001016!4.54e-08!75;UBERON:0001017!9.37e-08!73;UBERON:0005743!9.37e-08!73;UBERON:0000033!3.11e-07!63;UBERON:0000479!5.53e-07!349|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.83e-10,95;UBERON:0000924,6.83e-10,95;UBERON:0006601,6.83e-10,95;UBERON:0010314,8.16e-09,92;UBERON:0001016,6.73e-08,75;UBERON:0001017,1.40e-07,73;UBERON:0002346,4.11e-07,64;UBERON:0003075,4.11e-07,64;UBERON:0007284,4.11e-07,64;UBERON:0010371,6.69e-07,73|phase1_expression=0.960893082628764,0.348975407639361,0.909998478779072,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0.0874204024189974,0.333109761815663,0.202475267389826,0,0,0.274228867211478,0,8.41928572495591,0.496454756004426,1.04479915655574,0.47997726838022,1.37645568640302,0,0.430761996159075,0.861884930743556,0.760093677825496,1.00812051903972,1.10865255327652,3.17515336729816,4.92051830067656,0,0,0.498703936075477,0,0,0,0,0,0,0,9.4422613481683,9.32667767219534,4.03802854755699,25.0365230191373,4.79655344036982,5.27246838562732,2.72201858703997,6.15940255151595,1.43752564364972,0,0,0,7.20326420900652,18.3381401560804,7.21940929188419,1.41621522601718,5.28990979272033,0.633831403506179,5.42151251310611,7.11435836888911,4.04954872776629,1.97773272513395,4.9733608046227,10.1864037576258,11.5265491596466,0.518448061542388,0.405017814995072,0.420649922702764,9.42648248532552,7.28866185140325,2.81728838194394,3.64212789869298,2.75765635983006,27.5289702498472,20.1745994174597,23.348193054949,1.71452174049252,3.56801810049398,3.64639359389732,32.3852278841602,36.5795696520592,27.5036845998258,5.00868595305235,5.97961059356232,2.42319279572891,6.13382165998791,14.5853111006096,0.579728977403356,0,0,1.07940638327563,0,0.896053774194671,38.4817711161,31.5296096769407,42.3451187502676,51.5875778785097,0.845060518660083,15.3991772897181,17.8363667794652,7.11066703153331,0,1.26679932737549,0,5.93756174539112,1.29468941823586,10.8362761517322,1.73485326766136,2.13125834818499,1.15307748628029,2.11011696773672,2.93971767839262,2.89033160058254,0.988779870937496,34.7038456607788,20.3460426948471,48.5300549842228,38.4264242121085,22.3042616442202,9.31958806090611,4.09893115816166,1.8850203613211,3.32094171771169,0.11981512450592,0,0,23.9665023047716,18.7575247155637,1.63350657746724,13.3844726548053,12.5300574091862,23.0644729461112,16.710850095979,0.916554274652847,10.3257785606377,7.07623723614289,33.4602550859494,3.12289063110489,6.20735681970377,9.90341713929421,8.74087943447147,8.70867189136997,8.32739181851524,10.4008914261299,28.4573707812917,0.431135985865684,1.70195472151037,2.11141348996739,4.3839146485515,3.05851974148158,10.0993128291428,6.1734640922383,0,0,0,0,0.414251545071004,1.64168241986767,2.34080679899319,2.13070262026689,3.73852040320067,3.39387648352232,4.18561100550734,8.04820204198858,9.80828875884224,14.1521470925593,30.2068133905535,46.4524278697753,51.900995535993,42.1536221358817,45.2275631222453,14.2997165023607,1.02904612379284,0.660837565967596,0.793351699990633,0.639864751605702,1.62565670302307,1.41754207454303,1.00841762311671,0.22237804384487,0.951128130562796,0.949058123089023,0.988193728344065,1.50801125280162,1.79060824837036,0.38992817423824,1.79763881730844,1.08069024937347,1.1948476395262,0.379335801906163,1.25673363870702,1.1270773567308,1.01825663922657,0.969762435838129,0.280543279561274,0.758838445491087,5.16635517928608,6.59394656933774,9.00799296629144,0.889357881261447,0.667380422864376,0.393117990226406,0,1.01430060694251,0,1.01850340712568,0.287696137450811,0.162135226775035,1.37280706594041,5.75072826109418,3.34926852901653,4.68056509671841,0.757736633841335,6.09951205974501,0.964887042726734,22.1703828199926,1.70542270593436,1.46668478797823,0.678980343100753,2.11221223459652,2.68010011906905,4.04674189506223,2.14647012643579,9.93101407869003,11.0732344824387,16.7427507090361,23.5963173190663,23.4851575337618,15.1881511510587,0,0.54390568381871,2.45882136509518,1.10374698521893,31.3073650476194,28.1308047821288,0,112.854504460355,7.88770548540642,12.1036010731958,9.69405289797595,7.40803273652911,15.1503098376028,16.1353622549635,14.1683745586213,13.4437694639203,15.8115111178609,15.1021018718249,3.12268187458191,0.534196811001766,1.30309567482861,1.15479086080775,9.2921596837974,0.242780636154981,0.302323556964751,0.377210159511796,1.77181135728464,2.45948118355142,1.55056975900933,0,3.56497378384721,2.21225730555071,10.5418608574999,6.18813259489121,23.1498931912576,1.8006109403131,1.68166288917581,2.35770738534752,2.83744373827638,2.8539010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| ||
|EntrezGene=78688 | |||
|HGNC= | |||
|MCL_coexpression_id=311 | |||
|UniProt=Q9D1X0,Q53YU5 | |||
|association_with_transcript=0bp_to_ENSMUST00000014920,NM_030152,uc009ncd.1_5end | |||
|description=CAGE_peak_1_at_Nol3_5end | |||
|id=chr8:107800338..107800382,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!6.41e-10!102;UBERON:0000924!6.41e-10!102;UBERON:0006601!6.41e-10!102;UBERON:0000073!4.54e-08!75;UBERON:0001016!4.54e-08!75;UBERON:0001017!9.37e-08!73;UBERON:0005743!9.37e-08!73;UBERON:0000033!3.11e-07!63;UBERON:0000479!5.53e-07!349 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.83e-10,95;UBERON:0000924,6.83e-10,95;UBERON:0006601,6.83e-10,95;UBERON:0010314,8.16e-09,92;UBERON:0001016,6.73e-08,75;UBERON:0001017,1.40e-07,73;UBERON:0002346,4.11e-07,64;UBERON:0003075,4.11e-07,64;UBERON:0007284,4.11e-07,64;UBERON:0010371,6.69e-07,73 | |||
|phase1_expression=0.960893082628764,0.348975407639361,0.909998478779072,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0.0874204024189974,0.333109761815663,0.202475267389826,0,0,0.274228867211478,0,8.41928572495591,0.496454756004426,1.04479915655574,0.47997726838022,1.37645568640302,0,0.430761996159075,0.861884930743556,0.760093677825496,1.00812051903972,1.10865255327652,3.17515336729816,4.92051830067656,0,0,0.498703936075477,0,0,0,0,0,0,0,9.4422613481683,9.32667767219534,4.03802854755699,25.0365230191373,4.79655344036982,5.27246838562732,2.72201858703997,6.15940255151595,1.43752564364972,0,0,0,7.20326420900652,18.3381401560804,7.21940929188419,1.41621522601718,5.28990979272033,0.633831403506179,5.42151251310611,7.11435836888911,4.04954872776629,1.97773272513395,4.9733608046227,10.1864037576258,11.5265491596466,0.518448061542388,0.405017814995072,0.420649922702764,9.42648248532552,7.28866185140325,2.81728838194394,3.64212789869298,2.75765635983006,27.5289702498472,20.1745994174597,23.348193054949,1.71452174049252,3.56801810049398,3.64639359389732,32.3852278841602,36.5795696520592,27.5036845998258,5.00868595305235,5.97961059356232,2.42319279572891,6.13382165998791,14.5853111006096,0.579728977403356,0,0,1.07940638327563,0,0.896053774194671,38.4817711161,31.5296096769407,42.3451187502676,51.5875778785097,0.845060518660083,15.3991772897181,17.8363667794652,7.11066703153331,0,1.26679932737549,0,5.93756174539112,1.29468941823586,10.8362761517322,1.73485326766136,2.13125834818499,1.15307748628029,2.11011696773672,2.93971767839262,2.89033160058254,0.988779870937496,34.7038456607788,20.3460426948471,48.5300549842228,38.4264242121085,22.3042616442202,9.31958806090611,4.09893115816166,1.8850203613211,3.32094171771169,0.11981512450592,0,0,23.9665023047716,18.7575247155637,1.63350657746724,13.3844726548053,12.5300574091862,23.0644729461112,16.710850095979,0.916554274652847,10.3257785606377,7.07623723614289,33.4602550859494,3.12289063110489,6.20735681970377,9.90341713929421,8.74087943447147,8.70867189136997,8.32739181851524,10.4008914261299,28.4573707812917,0.431135985865684,1.70195472151037,2.11141348996739,4.3839146485515,3.05851974148158,10.0993128291428,6.1734640922383,0,0,0,0,0.414251545071004,1.64168241986767,2.34080679899319,2.13070262026689,3.73852040320067,3.39387648352232,4.18561100550734,8.04820204198858,9.80828875884224,14.1521470925593,30.2068133905535,46.4524278697753,51.900995535993,42.1536221358817,45.2275631222453,14.2997165023607,1.02904612379284,0.660837565967596,0.793351699990633,0.639864751605702,1.62565670302307,1.41754207454303,1.00841762311671,0.22237804384487,0.951128130562796,0.949058123089023,0.988193728344065,1.50801125280162,1.79060824837036,0.38992817423824,1.79763881730844,1.08069024937347,1.1948476395262,0.379335801906163,1.25673363870702,1.1270773567308,1.01825663922657,0.969762435838129,0.280543279561274,0.758838445491087,5.16635517928608,6.59394656933774,9.00799296629144,0.889357881261447,0.667380422864376,0.393117990226406,0,1.01430060694251,0,1.01850340712568,0.287696137450811,0.162135226775035,1.37280706594041,5.75072826109418,3.34926852901653,4.68056509671841,0.757736633841335,6.09951205974501,0.964887042726734,22.1703828199926,1.70542270593436,1.46668478797823,0.678980343100753,2.11221223459652,2.68010011906905,4.04674189506223,2.14647012643579,9.93101407869003,11.0732344824387,16.7427507090361,23.5963173190663,23.4851575337618,15.1881511510587,0,0.54390568381871,2.45882136509518,1.10374698521893,31.3073650476194,28.1308047821288,0,112.854504460355,7.88770548540642,12.1036010731958,9.69405289797595,7.40803273652911,15.1503098376028,16.1353622549635,14.1683745586213,13.4437694639203,15.8115111178609,15.1021018718249,3.12268187458191,0.534196811001766,1.30309567482861,1.15479086080775,9.2921596837974,0.242780636154981,0.302323556964751,0.377210159511796,1.77181135728464,2.45948118355142,1.55056975900933,0,3.56497378384721,2.21225730555071,10.5418608574999,6.18813259489121,23.1498931912576,1.8006109403131,1.68166288917581,2.35770738534752,2.83744373827638,2.85390108163313,4.60737257685939,3.65357938937519,0.938686832254841,1.0591603543191,8.15955072803359,21.9298716412168,15.0161916827192,11.218204036637,7.75920236020387,3.93938159388147,0.874442509889552,26.8866687915239,1.70870880797853,0.412773735926445,0.370389054739423,0.376736914009382,0.546776910884101,1.14389086603261,0.169978429993855,0.279902904647316,0.276399947608848,20.0480829783174,0.158167996790568,0.203319467126849,0.756037385752609,0.627264888043406,1.09181281873089,2.15782954215713,5.04186079924549,13.3495530411855,1.68499465279331,3.72803587852155,0,0.448549638131936,0.827292452285488,0.194451188344048,1.29159823477731,0.506868376472335,0.234714477291508,0.651021924219751,0.943734099831398,0.241584120826006,9.79302021276743,2.21207784439725,0.810900861160657,0.718976700153791,0.389762468933385,0.537080087002444,0.79472541912506,0.961563596159751,1.18151621739662,0.403865799792591,0.685861259894999,1.10908803650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| |||
|short_description=p1@Nol3 | |||
}} |
Revision as of 14:34, 14 September 2013
Short description: | p1@Nol3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nol3_5end |
Coexpression cluster: | MCL_coexpression_mm9:311 |
Association with transcript: | 0bp_to_ENSMUST00000014920, NM_030152, uc009ncd.1_5end |
EntrezGene: | Nol3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 6.83e-10 | 95 |
ectoderm | 6.83e-10 | 95 |
presumptive ectoderm | 6.83e-10 | 95 |
structure with developmental contribution from neural crest | 8.16e-09 | 92 |
nervous system | 6.73e-08 | 75 |
central nervous system | 1.40e-07 | 73 |
neurectoderm | 4.11e-07 | 64 |
neural plate | 4.11e-07 | 64 |
presumptive neural plate | 4.11e-07 | 64 |
ecto-epithelium | 6.69e-07 | 73 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.