FFCP PHASE1:Mm9::chr7:70357400..70357417,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11441|HGNC=|MCL_coexpression_id=13|UniProt=P49582,Q53YJ9,Q8CC01|association_with_transcript=0bp_to_ENSMUST00000032738,NM_007390,uc009vel.1_5end|description=CAGE_peak_1_at_Chrna7_5end|id=chr7:70357400..70357417,-|ontology_enrichment_celltype=CL:0000540!3.99e-18!33;CL:0000047!3.99e-18!33;CL:0000031!3.99e-18!33;CL:0000404!3.99e-18!33;CL:0000221!9.65e-15!44;CL:0000133!9.65e-15!44;CL:0002319!9.86e-15!43;CL:0000117!3.57e-13!23;CL:0000337!3.57e-13!23;CL:0000393!8.91e-13!39;CL:0000211!8.91e-13!39;CL:0000055!3.34e-10!50|ontology_enrichment_celltype_v019_2=CL:0000540,5.96e-22,33;CL:0000047,5.96e-22,33;CL:0000031,5.96e-22,33;CL:0000404,5.96e-22,33;CL:0000117,1.89e-16,23;CL:0000337,1.89e-16,23;CL:0000393,1.90e-16,39;CL:0000211,1.90e-16,39;CL:0002319,6.66e-15,43;CL:0000221,2.92e-14,44;CL:0000133,2.92e-14,44;CL:0000107,1.13e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.77e-30!102;UBERON:0000924!3.77e-30!102;UBERON:0006601!3.77e-30!102;UBERON:0002346!2.34e-29!71;UBERON:0003075!2.34e-29!71;UBERON:0007284!2.34e-29!71;UBERON:0001017!3.47e-28!73;UBERON:0005743!3.47e-28!73;UBERON:0000073!6.94e-28!75;UBERON:0001016!6.94e-28!75;UBERON:0000033!3.24e-21!63;UBERON:0001049!2.42e-20!52;UBERON:0005068!2.42e-20!52;UBERON:0006241!2.42e-20!52;UBERON:0007135!2.42e-20!52;UBERON:0000955!3.68e-19!50;UBERON:0006238!3.68e-19!50;UBERON:0002616!1.29e-18!49;UBERON:0003056!5.80e-18!49;UBERON:0002020!1.01e-17!34;UBERON:0003080!1.61e-15!40;UBERON:0002780!7.49e-15!39;UBERON:0001890!7.49e-15!39;UBERON:0006240!7.49e-15!39;UBERON:0002791!1.14e-14!29;UBERON:0003528!1.14e-14!29;UBERON:0001893!1.14e-14!29;UBERON:0000956!1.33e-10!21;UBERON:0001869!1.33e-10!21;UBERON:0000203!1.33e-10!21;UBERON:0007811!3.61e-09!86;UBERON:0000153!6.39e-09!94;UBERON:0002619!4.65e-08!17;UBERON:0000468!6.20e-07!333;UBERON:0002342!8.79e-07!10;UBERON:0005062!8.79e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.62e-31,73;UBERON:0001016,2.09e-29,75;UBERON:0002346,1.95e-28,64;UBERON:0003075,1.95e-28,64;UBERON:0007284,1.95e-28,64;UBERON:0004121,3.09e-26,95;UBERON:0000924,3.09e-26,95;UBERON:0006601,3.09e-26,95;UBERON:0000073,1.21e-24,54;UBERON:0001049,7.08e-23,52;UBERON:0005068,7.08e-23,52;UBERON:0006241,7.08e-23,52;UBERON:0007135,7.08e-23,52;UBERON:0010371,3.67e-22,73;UBERON:0002020,6.30e-21,34;UBERON:0010314,1.12e-20,92;UBERON:0003056,1.24e-19,49;UBERON:0000955,5.23e-19,47;UBERON:0006238,5.23e-19,47;UBERON:0002616,2.38e-18,46;UBERON:0003528,4.70e-17,29;UBERON:0002791,4.70e-17,29;UBERON:0001893,4.70e-17,29;UBERON:0003080,1.71e-16,40;UBERON:0002780,1.12e-15,39;UBERON:0001890,1.12e-15,39;UBERON:0006240,1.12e-15,39;UBERON:0000956,6.83e-12,21;UBERON:0001869,6.83e-12,21;UBERON:0000203,6.83e-12,21;UBERON:0002619,1.02e-08,17;UBERON:0002021,1.07e-07,10;UBERON:0000411,1.07e-07,10;UBERON:0001950,1.07e-07,10;UBERON:0002410,1.13e-07,9;UBERON:0003076,4.52e-07,12;UBERON:0003057,4.52e-07,12|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23260375313072,0.439372365468944,0.777719596297134,0.139986421625363,0,0,0,0,0,0.286533439938757,0,3.64169629547276,2.64495489636016,3.1691570175309,0,0,0,0,0,0.599200221036809,0.768436610643109,11.9243054154749,11.6105106965254,12.1988477583802,7.9982275633065,6.62605622854841,3.30725157880376,1.82106394934649,4.5960939330501,8.8092704799511,7.53355294702608,9.83081812839958,1.84640802822271,2.28719109006024,6.77187381723788,10.0505879640497,10.6924895906019,11.9182633265912,9.1334861496837,7.26095572075425,8.01517617048792,0.681535739998656,0.604572480854284,0,0,0,0,0.649776417447669,0,0.702222100658759,0,0,0,0.985903938436763,0,0,0,0,0,0,0.22836775943812,0,16.3286352971307,7.28638372417771,3.95805121805784,5.30415643688935,7.38540938707851,7.87844337809222,8.41966161908826,0,0.144599356919912,0,0.808834249737046,0,0.484875253135222,0,1.75668478206928,2.09446706813455,0,0,0,0,11.2342979553617,7.77751024791665,3.64397621127307,6.43149984711423,6.64860189058859,6.85700547046548,6.00292673350703,1.52759045775474,0,0,4.41927897361595,1.56144531555244,2.29902104433473,1.26043490863744,2.10986744970001,1.29269348387523,1.7935920839879,1.78033276663485,4.65666067330228,2.58681591519411,2.08016688184601,1.05570674498369,0.657587197282725,0.556094498451196,0,0.205782136407943,5.57295947091781,0,0,0,0.207125772535502,0.703578179943289,0.36012412292203,0.23674473558521,0.393528463494808,0.308534225774757,0,0,0.467061369468678,0,0,0.0810688095458557,0,0,0,12.1968170167194,11.4224119741006,0,0,1.49301775374664,3.48355007790658,1.54640953586512,1.00841762311671,0.889512175379481,1.33157938278791,0.474529061544512,0.658795818896044,0,0.994782360205754,1.16978452271472,0,0,0.398282546508734,1.51734320762465,3.31320686568214,0,3.25842124552503,2.71533482034676,2.31448205638051,2.02356918797623,0.738050739898011,2.511979645462,0.987177311374404,0,0.500535317148282,0,0.224862112384854,0,0,0,0,0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| ||
|EntrezGene=11441 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=P49582,Q53YJ9,Q8CC01 | |||
|association_with_transcript=0bp_to_ENSMUST00000032738,NM_007390,uc009vel.1_5end | |||
|description=CAGE_peak_1_at_Chrna7_5end | |||
|id=chr7:70357400..70357417,- | |||
|ontology_enrichment_celltype=CL:0000540!3.99e-18!33;CL:0000047!3.99e-18!33;CL:0000031!3.99e-18!33;CL:0000404!3.99e-18!33;CL:0000221!9.65e-15!44;CL:0000133!9.65e-15!44;CL:0002319!9.86e-15!43;CL:0000117!3.57e-13!23;CL:0000337!3.57e-13!23;CL:0000393!8.91e-13!39;CL:0000211!8.91e-13!39;CL:0000055!3.34e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.96e-22,33;CL:0000047,5.96e-22,33;CL:0000031,5.96e-22,33;CL:0000404,5.96e-22,33;CL:0000117,1.89e-16,23;CL:0000337,1.89e-16,23;CL:0000393,1.90e-16,39;CL:0000211,1.90e-16,39;CL:0002319,6.66e-15,43;CL:0000221,2.92e-14,44;CL:0000133,2.92e-14,44;CL:0000107,1.13e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.77e-30!102;UBERON:0000924!3.77e-30!102;UBERON:0006601!3.77e-30!102;UBERON:0002346!2.34e-29!71;UBERON:0003075!2.34e-29!71;UBERON:0007284!2.34e-29!71;UBERON:0001017!3.47e-28!73;UBERON:0005743!3.47e-28!73;UBERON:0000073!6.94e-28!75;UBERON:0001016!6.94e-28!75;UBERON:0000033!3.24e-21!63;UBERON:0001049!2.42e-20!52;UBERON:0005068!2.42e-20!52;UBERON:0006241!2.42e-20!52;UBERON:0007135!2.42e-20!52;UBERON:0000955!3.68e-19!50;UBERON:0006238!3.68e-19!50;UBERON:0002616!1.29e-18!49;UBERON:0003056!5.80e-18!49;UBERON:0002020!1.01e-17!34;UBERON:0003080!1.61e-15!40;UBERON:0002780!7.49e-15!39;UBERON:0001890!7.49e-15!39;UBERON:0006240!7.49e-15!39;UBERON:0002791!1.14e-14!29;UBERON:0003528!1.14e-14!29;UBERON:0001893!1.14e-14!29;UBERON:0000956!1.33e-10!21;UBERON:0001869!1.33e-10!21;UBERON:0000203!1.33e-10!21;UBERON:0007811!3.61e-09!86;UBERON:0000153!6.39e-09!94;UBERON:0002619!4.65e-08!17;UBERON:0000468!6.20e-07!333;UBERON:0002342!8.79e-07!10;UBERON:0005062!8.79e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.62e-31,73;UBERON:0001016,2.09e-29,75;UBERON:0002346,1.95e-28,64;UBERON:0003075,1.95e-28,64;UBERON:0007284,1.95e-28,64;UBERON:0004121,3.09e-26,95;UBERON:0000924,3.09e-26,95;UBERON:0006601,3.09e-26,95;UBERON:0000073,1.21e-24,54;UBERON:0001049,7.08e-23,52;UBERON:0005068,7.08e-23,52;UBERON:0006241,7.08e-23,52;UBERON:0007135,7.08e-23,52;UBERON:0010371,3.67e-22,73;UBERON:0002020,6.30e-21,34;UBERON:0010314,1.12e-20,92;UBERON:0003056,1.24e-19,49;UBERON:0000955,5.23e-19,47;UBERON:0006238,5.23e-19,47;UBERON:0002616,2.38e-18,46;UBERON:0003528,4.70e-17,29;UBERON:0002791,4.70e-17,29;UBERON:0001893,4.70e-17,29;UBERON:0003080,1.71e-16,40;UBERON:0002780,1.12e-15,39;UBERON:0001890,1.12e-15,39;UBERON:0006240,1.12e-15,39;UBERON:0000956,6.83e-12,21;UBERON:0001869,6.83e-12,21;UBERON:0000203,6.83e-12,21;UBERON:0002619,1.02e-08,17;UBERON:0002021,1.07e-07,10;UBERON:0000411,1.07e-07,10;UBERON:0001950,1.07e-07,10;UBERON:0002410,1.13e-07,9;UBERON:0003076,4.52e-07,12;UBERON:0003057,4.52e-07,12 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23260375313072,0.439372365468944,0.777719596297134,0.139986421625363,0,0,0,0,0,0.286533439938757,0,3.64169629547276,2.64495489636016,3.1691570175309,0,0,0,0,0,0.599200221036809,0.768436610643109,11.9243054154749,11.6105106965254,12.1988477583802,7.9982275633065,6.62605622854841,3.30725157880376,1.82106394934649,4.5960939330501,8.8092704799511,7.53355294702608,9.83081812839958,1.84640802822271,2.28719109006024,6.77187381723788,10.0505879640497,10.6924895906019,11.9182633265912,9.1334861496837,7.26095572075425,8.01517617048792,0.681535739998656,0.604572480854284,0,0,0,0,0.649776417447669,0,0.702222100658759,0,0,0,0.985903938436763,0,0,0,0,0,0,0.22836775943812,0,16.3286352971307,7.28638372417771,3.95805121805784,5.30415643688935,7.38540938707851,7.87844337809222,8.41966161908826,0,0.144599356919912,0,0.808834249737046,0,0.484875253135222,0,1.75668478206928,2.09446706813455,0,0,0,0,11.2342979553617,7.77751024791665,3.64397621127307,6.43149984711423,6.64860189058859,6.85700547046548,6.00292673350703,1.52759045775474,0,0,4.41927897361595,1.56144531555244,2.29902104433473,1.26043490863744,2.10986744970001,1.29269348387523,1.7935920839879,1.78033276663485,4.65666067330228,2.58681591519411,2.08016688184601,1.05570674498369,0.657587197282725,0.556094498451196,0,0.205782136407943,5.57295947091781,0,0,0,0.207125772535502,0.703578179943289,0.36012412292203,0.23674473558521,0.393528463494808,0.308534225774757,0,0,0.467061369468678,0,0,0.0810688095458557,0,0,0,12.1968170167194,11.4224119741006,0,0,1.49301775374664,3.48355007790658,1.54640953586512,1.00841762311671,0.889512175379481,1.33157938278791,0.474529061544512,0.658795818896044,0,0.994782360205754,1.16978452271472,0,0,0.398282546508734,1.51734320762465,3.31320686568214,0,3.25842124552503,2.71533482034676,2.31448205638051,2.02356918797623,0.738050739898011,2.511979645462,0.987177311374404,0,0.500535317148282,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,1.10851914099963,1.32643988239339,0.651859905768103,0.339490171550376,0,0,0,0,0.157635144106191,0,0.478364305972461,0,1.03610989119537,0.289298117163023,0,0,0,0,5.45872005958493,7.61875962849321,0,0,5.99465616890888,2.34263246577983,12.7099804662351,3.82350076724083,6.01556420022464,11.889214293131,6.07216052512342,11.3979784585412,12.2539211163422,6.42642632843614,0.425820255624806,0.890328018336276,0.977321756121456,0.494910368917606,0,0,0,0.188605079755898,0,0,0.516856586336442,0.363533729477506,1.42598951353889,0.632073515871632,0,0,3.06395645178409,1.26042765821917,0.646793418913773,1.07168517515796,0,0.891844088010353,0.987294123612726,1.2178597964584,0,0.21183207086382,1.54369878638473,0.16488625294148,0,0.241251699712623,0.119372344003136,0,0,6.67531087237835,0,0.412773735926445,0.185194527369712,0,0,0,0.169978429993855,0,0.276399947608848,0,0.790839983952838,1.62655573701479,0.756037385752609,0.418176592028937,0.436725127492355,0.674321731924103,0.826534557253359,0.26175594198403,0.129614973291793,0.621339313086926,0,3.88743019714345,1.98550188548517,0.972255941720238,1.80823752868824,0.844780627453891,0.938857909166032,0.13020438484395,0.943734099831398,0.483168241652012,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0,0.503653849092235,0.579568782096571,0.375364950902364,0.915758121336325,0.214368379079066,0,9.60078132449013,6.44455331110048,7.44764167471216,8.07709957015332,2.74033007908257,6.7985450765073,3.37511250115903,8.55610286126019,4.07828168085784,3.62432218226274,0.726511433089237,3.19219898720825,1.70733605754134,0.486213434136588,1.25767897576789,0.735374033800057,1.11123363900808,2.26638562962784,0.64183841918363,1.76888048234658,1.52087579934144,0.754505365544305,1.77918864192777,1.53660365771686,1.37845125493472,1.90517476513229,1.85414921511769,0.964546102318525,1.64834360321323,1.03039244094078,2.05721551431249,1.95223386775271,1.43061713968393,2.47088908274958,1.2234219453993,1.69229215783353,0.914639864363863,1.8414879800649,1.08643291076689,3.92799590160417,1.77952527186261,1.77308068276014,2.04615521584845,2.01417893541756,0.771626443924566,2.99772693525535,1.16965804222704,0.859484216193193,1.14772999241306,0.882365676478062,1.15933917810211 | |||
|short_description=p1@Chrna7 | |||
}} |
Revision as of 14:02, 14 September 2013
Short description: | p1@Chrna7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Chrna7_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000032738, NM_007390, uc009vel.1_5end |
EntrezGene: | Chrna7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.96e-22 | 33 |
neuronal stem cell | 5.96e-22 | 33 |
neuroblast | 5.96e-22 | 33 |
electrically signaling cell | 5.96e-22 | 33 |
CNS neuron (sensu Vertebrata) | 1.89e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.89e-16 | 23 |
electrically responsive cell | 1.90e-16 | 39 |
electrically active cell | 1.90e-16 | 39 |
neural cell | 6.66e-15 | 43 |
ectodermal cell | 2.92e-14 | 44 |
neurectodermal cell | 2.92e-14 | 44 |
autonomic neuron | 1.13e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.