FFCP PHASE1:Mm9::chr7:53086146..53086186,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=101612|HGNC=|MCL_coexpression_id=301|UniProt=Q8BIF7,Q8K335,F7CPC6,G3UVT6,Q5XJZ3|association_with_transcript=0bp_to_ENSMUST00000066438,ENSMUST00000098448,ENSMUST00000107723,ENSMUST00000150188,NM_153419,uc009gxj.2,uc012fkr.1_5end|description=CAGE_peak_1_at_Grwd1_5end|id=chr7:53086146..53086186,-|ontology_enrichment_celltype=CL:0000034!3.47e-10!97;CL:0000548!4.07e-10!115;CL:0000004!4.07e-10!115;CL:0000255!4.07e-10!115;CL:0000988!9.42e-10!32;CL:0002032!9.42e-10!32;CL:0000037!9.42e-10!32;CL:0000566!9.42e-10!32;CL:0000837!9.42e-10!32;CL:0000144!1.61e-09!121;CL:0000012!1.61e-09!121;CL:0000219!7.82e-09!54;CL:0002320!8.31e-09!46;CL:0000134!8.31e-09!46;CL:0002371!1.52e-08!118;CL:0000063!2.80e-08!66;CL:0000723!7.06e-08!91;CL:0000048!7.06e-08!91|ontology_enrichment_celltype_v019_2=CL:0000034,3.49e-10,97;CL:0000988,9.42e-10,32;CL:0002032,9.42e-10,32;CL:0000037,9.42e-10,32;CL:0000837,9.42e-10,32;CL:0000219,7.82e-09,54;CL:0002320,8.31e-09,46;CL:0000134,8.31e-09,46;CL:0000723,7.10e-08,91;CL:0000048,7.10e-08,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!8.31e-09!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.31e-09,46|phase1_expression=11.3705681444404,1.39590163055744,1.81999695755814,0.90739263392049,1.00179145989269,13.766100296775,11.4470193891808,10.8463591690924,84.6140220131517,73.262196738784,79.9587911613108,76.5015004765276,14.7232627740837,14.1621051918776,18.6541466616771,11.9460407759997,7.69518065940961,13.4071420277251,11.1062691220648,13.580468857537,6.97354979238772,10.9220046320974,8.35839325244593,5.75972722056264,5.50582274561208,5.7423196411502,9.47676391549965,6.24866574789078,4.75058548640935,7.56090389279792,11.7517170647311,42.5470551217953,49.8202477943502,31.6963362030877,24.8412392986096,30.0884708098871,27.3586937391575,1.25559489221072,0.7813353445238,0.523523743973798,0,0.683045484958446,0.485510353031154,7.05022180663233,8.11015449756117,10.8292583775392,16.4302182313088,10.6832326626419,10.3252505885202,7.77719596297134,9.51907667052465,7.18762821824858,18.1205214542355,7.97898356212479,14.1159395639835,8.7468208252222,7.44986943840768,6.18806510732931,16.589949790487,18.5146842745212,11.4089652631112,26.0910289693232,15.1180115338894,18.4479442042687,12.8552627133707,14.209602298922,14.6804054154018,17.6740420447915,12.7538223139428,12.8255641415106,14.302097371894,12.5686433137674,11.7060326704355,12.9840247167851,13.2266750005166,10.1114066527102,6.60695285996332,7.78892762319645,6.75868746327471,12.7929699098288,12.9912453915422,11.9810075228055,11.1673199600552,10.6924895906019,7.02871939773326,10.606629077052,10.1083893367363,13.4207600994216,27.564334373279,9.44644501334819,6.37701875143691,8.60423876981386,25.1589393471868,6.47643829965381,6.49776417447669,8.51251085484938,5.47733238513832,6.64678258054425,13.2490862347463,6.36011234118612,9.71819596459095,10.2661181931454,12.7402619853323,14.2213340630666,15.8038459938186,18.2419103142071,12.6381111253696,5.709193985953,6.47344709117929,8.16431764856536,23.0735484598961,18.5723941770406,11.992005857315,9.3448037142626,7.2904998424137,9.17366116706631,2.71914464507811,3.18118585223806,8.84610551949874,7.60304194752823,5.52103796150984,5.81850303762267,1.86391761218122,5.5628351432194,4.81727425670947,5.10914110417183,25.2809912707492,32.394747473644,19.4417447421789,4.6435098215495,5.94750783664214,13.9476330845279,7.99591872884472,6.39288643325826,4.98691306942944,7.13861557498134,10.7949725681335,5.349499736234,7.83440551144392,3.36706969418358,17.566259799965,17.7024620413774,9.90341713929421,10.8507468841715,6.80364991513279,8.83984669965463,7.40243624021858,3.10444044886819,16.383167462896,15.3175924935934,10.7330185740009,14.4669183402199,10.5657954705727,6.96504333044333,8.43706759272568,16.5198441459349,17.5553296828309,16.4702660553418,19.6072814582959,10.5634143993106,10.7881987591304,11.884096056427,10.8902578369197,9.44468312387538,6.94202007993202,6.97601834251224,9.12129564758705,9.34122738937356,9.37991144506839,7.05920095540109,4.62092214411378,4.82459958503597,5.48875288227627,5.09984391289413,8.20130799400096,11.0107935245834,2.31293148088659,9.52022039988759,18.7693660471006,16.4888037020911,13.4022159774977,8.0673409849337,6.0042071838115,6.65789691393957,9.01605216934572,7.5761519173045,6.78605063760728,3.58121649674071,5.8489226135736,13.4822911298133,5.40345124686736,3.78368419183298,21.0531370057921,15.6520462275328,19.1603150644237,12.6263823264095,12.0250542043928,11.6425461017929,5.69128834118316,5.31396532726568,3.92496819603437,5.67626954040282,10.3758419480502,16.3508203601772,14.9384836286034,15.5154857545549,9.53442570525964,11.3353265083636,15.786802810448,8.0554918486227,9.72811360650212,11.2570179407113,7.18841032636773,8.18710084870708,6.24075346229121,9.59799736199025,10.225652570749,8.20153986317724,4.24932337383191,26.1498148243269,12.87423313892,19.5206848641466,12.2038929110021,5.19269398069629,3.332610972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| ||
|EntrezGene=101612 | |||
|HGNC= | |||
|MCL_coexpression_id=301 | |||
|UniProt=Q8BIF7,Q8K335,F7CPC6,G3UVT6,Q5XJZ3 | |||
|association_with_transcript=0bp_to_ENSMUST00000066438,ENSMUST00000098448,ENSMUST00000107723,ENSMUST00000150188,NM_153419,uc009gxj.2,uc012fkr.1_5end | |||
|description=CAGE_peak_1_at_Grwd1_5end | |||
|id=chr7:53086146..53086186,- | |||
|ontology_enrichment_celltype=CL:0000034!3.47e-10!97;CL:0000548!4.07e-10!115;CL:0000004!4.07e-10!115;CL:0000255!4.07e-10!115;CL:0000988!9.42e-10!32;CL:0002032!9.42e-10!32;CL:0000037!9.42e-10!32;CL:0000566!9.42e-10!32;CL:0000837!9.42e-10!32;CL:0000144!1.61e-09!121;CL:0000012!1.61e-09!121;CL:0000219!7.82e-09!54;CL:0002320!8.31e-09!46;CL:0000134!8.31e-09!46;CL:0002371!1.52e-08!118;CL:0000063!2.80e-08!66;CL:0000723!7.06e-08!91;CL:0000048!7.06e-08!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,3.49e-10,97;CL:0000988,9.42e-10,32;CL:0002032,9.42e-10,32;CL:0000037,9.42e-10,32;CL:0000837,9.42e-10,32;CL:0000219,7.82e-09,54;CL:0002320,8.31e-09,46;CL:0000134,8.31e-09,46;CL:0000723,7.10e-08,91;CL:0000048,7.10e-08,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!8.31e-09!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.31e-09,46 | |||
|phase1_expression=11.3705681444404,1.39590163055744,1.81999695755814,0.90739263392049,1.00179145989269,13.766100296775,11.4470193891808,10.8463591690924,84.6140220131517,73.262196738784,79.9587911613108,76.5015004765276,14.7232627740837,14.1621051918776,18.6541466616771,11.9460407759997,7.69518065940961,13.4071420277251,11.1062691220648,13.580468857537,6.97354979238772,10.9220046320974,8.35839325244593,5.75972722056264,5.50582274561208,5.7423196411502,9.47676391549965,6.24866574789078,4.75058548640935,7.56090389279792,11.7517170647311,42.5470551217953,49.8202477943502,31.6963362030877,24.8412392986096,30.0884708098871,27.3586937391575,1.25559489221072,0.7813353445238,0.523523743973798,0,0.683045484958446,0.485510353031154,7.05022180663233,8.11015449756117,10.8292583775392,16.4302182313088,10.6832326626419,10.3252505885202,7.77719596297134,9.51907667052465,7.18762821824858,18.1205214542355,7.97898356212479,14.1159395639835,8.7468208252222,7.44986943840768,6.18806510732931,16.589949790487,18.5146842745212,11.4089652631112,26.0910289693232,15.1180115338894,18.4479442042687,12.8552627133707,14.209602298922,14.6804054154018,17.6740420447915,12.7538223139428,12.8255641415106,14.302097371894,12.5686433137674,11.7060326704355,12.9840247167851,13.2266750005166,10.1114066527102,6.60695285996332,7.78892762319645,6.75868746327471,12.7929699098288,12.9912453915422,11.9810075228055,11.1673199600552,10.6924895906019,7.02871939773326,10.606629077052,10.1083893367363,13.4207600994216,27.564334373279,9.44644501334819,6.37701875143691,8.60423876981386,25.1589393471868,6.47643829965381,6.49776417447669,8.51251085484938,5.47733238513832,6.64678258054425,13.2490862347463,6.36011234118612,9.71819596459095,10.2661181931454,12.7402619853323,14.2213340630666,15.8038459938186,18.2419103142071,12.6381111253696,5.709193985953,6.47344709117929,8.16431764856536,23.0735484598961,18.5723941770406,11.992005857315,9.3448037142626,7.2904998424137,9.17366116706631,2.71914464507811,3.18118585223806,8.84610551949874,7.60304194752823,5.52103796150984,5.81850303762267,1.86391761218122,5.5628351432194,4.81727425670947,5.10914110417183,25.2809912707492,32.394747473644,19.4417447421789,4.6435098215495,5.94750783664214,13.9476330845279,7.99591872884472,6.39288643325826,4.98691306942944,7.13861557498134,10.7949725681335,5.349499736234,7.83440551144392,3.36706969418358,17.566259799965,17.7024620413774,9.90341713929421,10.8507468841715,6.80364991513279,8.83984669965463,7.40243624021858,3.10444044886819,16.383167462896,15.3175924935934,10.7330185740009,14.4669183402199,10.5657954705727,6.96504333044333,8.43706759272568,16.5198441459349,17.5553296828309,16.4702660553418,19.6072814582959,10.5634143993106,10.7881987591304,11.884096056427,10.8902578369197,9.44468312387538,6.94202007993202,6.97601834251224,9.12129564758705,9.34122738937356,9.37991144506839,7.05920095540109,4.62092214411378,4.82459958503597,5.48875288227627,5.09984391289413,8.20130799400096,11.0107935245834,2.31293148088659,9.52022039988759,18.7693660471006,16.4888037020911,13.4022159774977,8.0673409849337,6.0042071838115,6.65789691393957,9.01605216934572,7.5761519173045,6.78605063760728,3.58121649674071,5.8489226135736,13.4822911298133,5.40345124686736,3.78368419183298,21.0531370057921,15.6520462275328,19.1603150644237,12.6263823264095,12.0250542043928,11.6425461017929,5.69128834118316,5.31396532726568,3.92496819603437,5.67626954040282,10.3758419480502,16.3508203601772,14.9384836286034,15.5154857545549,9.53442570525964,11.3353265083636,15.786802810448,8.0554918486227,9.72811360650212,11.2570179407113,7.18841032636773,8.18710084870708,6.24075346229121,9.59799736199025,10.225652570749,8.20153986317724,4.24932337383191,26.1498148243269,12.87423313892,19.5206848641466,12.2038929110021,5.19269398069629,3.33261097240419,3.31727201358258,4.09851374676097,3.98636441367795,5.89982644032702,3.76885623846197,3.9717545829156,3.03763023021174,6.03165135757089,8.70249094109935,8.35999264132362,8.00216564283724,4.0137647496948,4.57125577709592,15.5738198107842,4.54447668967871,11.9893123378178,7.41833614163613,8.18608911384636,10.7535959078648,9.13474563737816,9.05844898524264,8.09621403349789,7.89090816360542,4.74345333535828,4.17717711348349,8.23252494207958,17.0942979520565,12.5422958702254,7.4236555337641,5.30980553359851,23.3069410708782,19.9533547596736,5.84675747243284,7.38254732201932,7.07100840271033,10.8539883130653,7.27067458955011,9.9819265947722,7.26884543252377,10.5418608574999,4.12542172992747,5.7874732978144,17.6459872150684,14.6175312674513,10.2881776815164,8.86701168211368,10.167022603318,11.1893334009442,14.6143175575008,9.85621173867584,3.60114520468494,5.95426674748397,7.09010887648364,3.55221738730992,8.44380948994182,10.2660215842697,10.0125948844487,9.03590593552537,4.45020724825223,9.22702756308404,14.2406938894624,9.81530995059472,8.85331747922048,7.24479406921433,10.2950177942935,18.0177135793487,16.9341257311626,14.9255971708778,6.68269432610579,16.6076396630096,15.2489600345137,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| |||
|short_description=p1@Grwd1 | |||
}} | |||
Revision as of 13:49, 14 September 2013
| Short description: | p1@Grwd1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Grwd1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:301 |
| Association with transcript: | 0bp_to_ENSMUST00000066438, ENSMUST00000098448, ENSMUST00000107723, ENSMUST00000150188, NM_153419, uc009gxj.2, uc012fkr.1_5end |
| EntrezGene: | Grwd1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| stem cell | 3.49e-10 | 97 |
| hematopoietic cell | 9.42e-10 | 32 |
| hematopoietic oligopotent progenitor cell | 9.42e-10 | 32 |
| hematopoietic stem cell | 9.42e-10 | 32 |
| hematopoietic multipotent progenitor cell | 9.42e-10 | 32 |
| motile cell | 7.82e-09 | 54 |
| connective tissue cell | 8.31e-09 | 46 |
| mesenchymal cell | 8.31e-09 | 46 |
| somatic stem cell | 7.10e-08 | 91 |
| multi fate stem cell | 7.10e-08 | 91 |
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 8.31e-09 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
