FFCP PHASE1:Mm9::chr7:30980039..30980050,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12336|HGNC=|MCL_coexpression_id=2403|UniProt=|association_with_transcript=4bp_to_ENSMUST00000146852_5end|description=CAGE_peak_2_at_Capns1_5end|id=chr7:30980039..30980050,-|ontology_enrichment_celltype=CL:0000333!9.73e-08!10;CL:0000095!9.73e-08!10;CL:0000243!9.73e-08!10;CL:0000123!9.73e-08!10;CL:0000125!9.73e-08!10;CL:0000030!9.73e-08!10;CL:0000339!9.73e-08!10;CL:0002453!8.61e-07!8|ontology_enrichment_celltype_v019_2=CL:0000333,8.17e-08,10;CL:0000095,8.17e-08,10;CL:0000243,8.17e-08,10;CL:0000123,8.17e-08,10;CL:0000125,8.17e-08,10;CL:0000030,8.17e-08,10;CL:0000339,8.17e-08,10;CL:0002453,7.43e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!3.56e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000010,3.04e-07,11|phase1_expression=0.320297694209588,0.348975407639361,0.454999239389536,0.30246421130683,2.00358291978539,0.16787927191189,0.467225281191051,0.129123323441576,1.97104211012333,0.936258105287974,0.68487187290202,0,1.19840510951844,0,0.333109761815663,0.607425802169478,0,1.10411757875383,0.548457734422955,0.42438965179803,0.255129870453209,0.695036658406197,0.522399578277871,0.47997726838022,1.37645568640302,0.57423196411502,0,0.215471232685889,0.950117097281869,1.76421090831952,0.443461021310609,2.54012269383853,8.61090702618398,0,0.288851619751275,0,0.612508068787107,6.27797446105362,2.3440060335714,5.23523743973798,9.41170380849623,4.09827290975067,7.2826552954673,0.125896817975577,0.304130793658544,0.367093504323363,17.2126095756569,43.8230564324697,51.1868805771319,77.3830998315648,26.7374065304442,17.2503077237966,1.67782606057736,1.45072428402269,1.00828139742739,21.0952737549477,14.0401385569991,13.4074743992135,1.82084814773638,0.528990979272033,1.26766280701236,23.7191172448392,33.7932022522233,21.5975932147536,6.92206453796882,15.6305625288142,23.9680088414724,39.5744854481201,0.622137673850866,0.135005938331691,0.420649922702764,0.285650984403804,0.883474163806454,0.244981598429908,0.670918297127655,0,2.20231761998777,1.91531007127782,0.921639199537461,0.527545150920775,1.28082701043374,0.52091337055676,3.35019598801657,1.12552522006336,3.0559649555362,1.47314292736834,1.70846016958924,1.3047961207771,7.49689313998522,11.638020256445,2.89864488701678,7.74381489283248,7.47968467078526,1.07940638327563,0.649776417447669,0.448026887097336,0.140444420131752,0.681721290312231,1.29893002301434,1.41335829804136,1.26759077799012,1.28326477414318,0,0,14.9378818297738,21.5355885653834,19.2099289105618,0.11418387971906,2.33044095282455,12.6175818205101,5.03107447621794,1.52232739156071,6.6878494204257,3.61734337326294,4.46837087115678,13.8233250462643,9.64060374164058,4.33798070759735,4.42305275974937,3.23533699894818,3.09178125844551,2.42437626567611,11.1835056730873,0.585561594023094,0.83778682725382,4.59822699375465,1.91704199209472,3.59941638596045,1.39777249780371,1.49790639404823,0,0.753926112677186,0.347648640384553,0,1.66230435647648,1.62241263067758,5.39748628406676,2.73695335342205,7.83440551144392,4.20883711772948,0.780722657776222,4.13823787980251,2.88099407688559,2.26057226753573,1.76894897793452,1.15302348256365,1.68663104207512,2.58703370739016,1.72454394346274,1.89106080167819,2.28736461413134,5.2606975782618,1.11218899690239,3.48252166522167,2.26360350048738,2.7864797354589,3.51106593656617,6.43369767786788,3.12579849335152,2.48550927042602,0.703578179943289,2.34080679899319,3.55117103377815,2.55793501271625,1.23413690309903,0.930135779001631,3.48755421819505,2.33530684734339,2.46839774870221,2.46251196118643,4.29664690593035,3.07019973593198,5.48875288227627,5.63666958793561,1.26173969138476,0.514523061896422,5.61711931072457,3.70230793328962,1.91959425481711,1.62565670302307,3.8660238396628,2.21851877085677,4.00280478920767,5.1360919050391,3.32170343081158,5.10566759644434,2.26201687920243,2.78539060857611,3.50935356814416,2.69645822596266,3.6743468478698,4.58024928485045,3.79335801906163,2.74196430263349,4.50830942692322,1.83286195060783,0.969762435838129,3.64706263429657,2.33975187359752,1.77132177575523,1.255989822731,1.85095745882701,0.889357881261447,2.66952169145751,3.53806191203765,2.02375901146368,3.24576194221605,2.17059443777175,1.78238096246994,2.87696137450811,1.13494658742525,2.19649130550465,0,1.86070473834252,0.624075346229121,1.01031551178845,1.07638448113147,1.92977408545347,2.58654466233247,3.22135400009824,2.28150967018836,2.54617628662782,0.938760993154008,3.85264392116176,4.52282917683426,2.53673742215138,2.36452716159286,1.55025282754142,1.2756381492599,1.63863314715738,1.55416483679306,3.7608755231193,0,1.08781136763742,1.96705709207614,2.48343071674259,4.0137647496948,2.81308047821288,5.08198330667694,4.03953483526997,7.2566890465739,10.1514073517126,6.67812532971677,12.9043150894378,18.4922899488387,19.8153571552183,10.1202675418724,16.0740721851222,12.2539211163422,0.963963949265421,7.38088443082997,3.02711526234334,4.56083486190013,5.60898418106621,0,3.39892890616974,3.6278826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| ||
|EntrezGene=12336 | |||
|HGNC= | |||
|MCL_coexpression_id=2403 | |||
|UniProt= | |||
|association_with_transcript=4bp_to_ENSMUST00000146852_5end | |||
|description=CAGE_peak_2_at_Capns1_5end | |||
|id=chr7:30980039..30980050,- | |||
|ontology_enrichment_celltype=CL:0000333!9.73e-08!10;CL:0000095!9.73e-08!10;CL:0000243!9.73e-08!10;CL:0000123!9.73e-08!10;CL:0000125!9.73e-08!10;CL:0000030!9.73e-08!10;CL:0000339!9.73e-08!10;CL:0002453!8.61e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,8.17e-08,10;CL:0000095,8.17e-08,10;CL:0000243,8.17e-08,10;CL:0000123,8.17e-08,10;CL:0000125,8.17e-08,10;CL:0000030,8.17e-08,10;CL:0000339,8.17e-08,10;CL:0002453,7.43e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!3.56e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,3.04e-07,11 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0.454999239389536,0.30246421130683,2.00358291978539,0.16787927191189,0.467225281191051,0.129123323441576,1.97104211012333,0.936258105287974,0.68487187290202,0,1.19840510951844,0,0.333109761815663,0.607425802169478,0,1.10411757875383,0.548457734422955,0.42438965179803,0.255129870453209,0.695036658406197,0.522399578277871,0.47997726838022,1.37645568640302,0.57423196411502,0,0.215471232685889,0.950117097281869,1.76421090831952,0.443461021310609,2.54012269383853,8.61090702618398,0,0.288851619751275,0,0.612508068787107,6.27797446105362,2.3440060335714,5.23523743973798,9.41170380849623,4.09827290975067,7.2826552954673,0.125896817975577,0.304130793658544,0.367093504323363,17.2126095756569,43.8230564324697,51.1868805771319,77.3830998315648,26.7374065304442,17.2503077237966,1.67782606057736,1.45072428402269,1.00828139742739,21.0952737549477,14.0401385569991,13.4074743992135,1.82084814773638,0.528990979272033,1.26766280701236,23.7191172448392,33.7932022522233,21.5975932147536,6.92206453796882,15.6305625288142,23.9680088414724,39.5744854481201,0.622137673850866,0.135005938331691,0.420649922702764,0.285650984403804,0.883474163806454,0.244981598429908,0.670918297127655,0,2.20231761998777,1.91531007127782,0.921639199537461,0.527545150920775,1.28082701043374,0.52091337055676,3.35019598801657,1.12552522006336,3.0559649555362,1.47314292736834,1.70846016958924,1.3047961207771,7.49689313998522,11.638020256445,2.89864488701678,7.74381489283248,7.47968467078526,1.07940638327563,0.649776417447669,0.448026887097336,0.140444420131752,0.681721290312231,1.29893002301434,1.41335829804136,1.26759077799012,1.28326477414318,0,0,14.9378818297738,21.5355885653834,19.2099289105618,0.11418387971906,2.33044095282455,12.6175818205101,5.03107447621794,1.52232739156071,6.6878494204257,3.61734337326294,4.46837087115678,13.8233250462643,9.64060374164058,4.33798070759735,4.42305275974937,3.23533699894818,3.09178125844551,2.42437626567611,11.1835056730873,0.585561594023094,0.83778682725382,4.59822699375465,1.91704199209472,3.59941638596045,1.39777249780371,1.49790639404823,0,0.753926112677186,0.347648640384553,0,1.66230435647648,1.62241263067758,5.39748628406676,2.73695335342205,7.83440551144392,4.20883711772948,0.780722657776222,4.13823787980251,2.88099407688559,2.26057226753573,1.76894897793452,1.15302348256365,1.68663104207512,2.58703370739016,1.72454394346274,1.89106080167819,2.28736461413134,5.2606975782618,1.11218899690239,3.48252166522167,2.26360350048738,2.7864797354589,3.51106593656617,6.43369767786788,3.12579849335152,2.48550927042602,0.703578179943289,2.34080679899319,3.55117103377815,2.55793501271625,1.23413690309903,0.930135779001631,3.48755421819505,2.33530684734339,2.46839774870221,2.46251196118643,4.29664690593035,3.07019973593198,5.48875288227627,5.63666958793561,1.26173969138476,0.514523061896422,5.61711931072457,3.70230793328962,1.91959425481711,1.62565670302307,3.8660238396628,2.21851877085677,4.00280478920767,5.1360919050391,3.32170343081158,5.10566759644434,2.26201687920243,2.78539060857611,3.50935356814416,2.69645822596266,3.6743468478698,4.58024928485045,3.79335801906163,2.74196430263349,4.50830942692322,1.83286195060783,0.969762435838129,3.64706263429657,2.33975187359752,1.77132177575523,1.255989822731,1.85095745882701,0.889357881261447,2.66952169145751,3.53806191203765,2.02375901146368,3.24576194221605,2.17059443777175,1.78238096246994,2.87696137450811,1.13494658742525,2.19649130550465,0,1.86070473834252,0.624075346229121,1.01031551178845,1.07638448113147,1.92977408545347,2.58654466233247,3.22135400009824,2.28150967018836,2.54617628662782,0.938760993154008,3.85264392116176,4.52282917683426,2.53673742215138,2.36452716159286,1.55025282754142,1.2756381492599,1.63863314715738,1.55416483679306,3.7608755231193,0,1.08781136763742,1.96705709207614,2.48343071674259,4.0137647496948,2.81308047821288,5.08198330667694,4.03953483526997,7.2566890465739,10.1514073517126,6.67812532971677,12.9043150894378,18.4922899488387,19.8153571552183,10.1202675418724,16.0740721851222,12.2539211163422,0.963963949265421,7.38088443082997,3.02711526234334,4.56083486190013,5.60898418106621,0,3.39892890616974,3.62788268357701,3.01768127609437,5.02013217897314,3.3817866273832,3.87642439752332,2.54473610634254,1.06949213515416,1.58018378967908,1.05418608574999,1.03135543248187,4.08527526904546,0.900305470156551,2.06973894052407,1.92903331528433,2.6601035046341,1.60531935841864,2.13913726782757,6.08929898229199,11.2642419870581,2.75381692122966,4.19003956304428,3.46261131177108,1.45317984026315,2.0506394475573,1.67121281604391,1.64140899745061,3.49777003955821,4.26478194624172,1.19609616558497,3.92135049130123,2.96311243791539,1.13021074202815,0.546776910884101,0.915112692826091,3.22959016988325,3.35883485576779,3.31679937130617,9.54670618015114,2.21435195506795,4.06638934253697,3.45617090629764,1.88179466413022,2.40198820120795,4.98998081623837,5.12451425497083,6.28214260761671,2.98114438571124,3.106696565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| |||
|short_description=p2@Capns1 | |||
}} | |||
Revision as of 13:10, 14 September 2013
| Short description: | p2@Capns1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Capns1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2403 |
| Association with transcript: | 4bp_to_ENSMUST00000146852_5end |
| EntrezGene: | Capns1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| migratory neural crest cell | 8.17e-08 | 10 |
| neuron associated cell | 8.17e-08 | 10 |
| glial cell (sensu Vertebrata) | 8.17e-08 | 10 |
| neuron associated cell (sensu Vertebrata) | 8.17e-08 | 10 |
| glial cell | 8.17e-08 | 10 |
| glioblast | 8.17e-08 | 10 |
| glioblast (sensu Vertebrata) | 8.17e-08 | 10 |
| oligodendrocyte precursor cell | 7.43e-07 | 8 |
| Ontology term | p-value | n |
|---|---|---|
| peripheral nervous system | 3.04e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
