FFCP PHASE1:Mm9::chr7:28902402..28902411,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=273|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:28902402..28902411,+|id=chr7:28902402..28902411,+|ontology_enrichment_celltype=CL:0000239!1.06e-17!6;CL:0000677!1.06e-17!6;CL:0000212!1.06e-17!6;CL:0000584!1.06e-17!6;CL:0000075!3.78e-15!7;CL:0002563!9.74e-12!9;CL:0002251!9.74e-12!9;CL:0000066!1.46e-07!25;CL:0002076!6.09e-07!15|ontology_enrichment_celltype_v019_2=CL:0000239,1.13e-15,6;CL:0000677,1.13e-15,6;CL:0000584,1.13e-15,6;CL:0000075,1.34e-13,7;CL:0002563,8.07e-11,9;CL:0002251,8.07e-11,9;CL:0000066,9.87e-09,25;CL:0000682,1.88e-08,3;CL:0002076,6.77e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!7.22e-22!15;UBERON:0001242!2.19e-15!13;UBERON:0000060!2.19e-15!13;UBERON:0001262!2.19e-15!13;UBERON:0004786!2.19e-15!13;UBERON:0000160!4.71e-14!43;UBERON:0004923!3.75e-13!24;UBERON:0005409!4.90e-13!59;UBERON:0003350!9.74e-12!9;UBERON:0004808!9.74e-12!9;UBERON:0001277!9.74e-12!9;UBERON:0001962!1.25e-09!2;UBERON:0001961!1.25e-09!2;UBERON:0001744!1.25e-09!2;UBERON:0000485!1.46e-09!11|ontology_enrichment_uberon_v019_2=UBERON:0001242,5.32e-16,13;UBERON:0001262,5.32e-16,13;UBERON:0004786,5.32e-16,13;UBERON:0000344,5.35e-14,15;UBERON:0003350,8.07e-11,9;UBERON:0004808,8.07e-11,9;UBERON:0001277,8.07e-11,9;UBERON:0004923,4.35e-09,24;UBERON:0000485,4.82e-09,11;UBERON:0000331,1.59e-08,3;UBERON:0002116,1.59e-08,3;UBERON:0001204,1.59e-08,3;UBERON:0001168,1.59e-08,3;UBERON:0000160,3.20e-07,31|phase1_expression=0,0.348975407639361,0,0.30246421130683,0.500895729946347,3.3575854382378,9.81173090501208,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.799962113967033,0.91763712426868,0,1.29228598847722,0.430942465371778,1.33016393619462,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr7:28902402..28902411,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=273 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:28902402..28902411,+ | |||
|id=chr7:28902402..28902411,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.06e-17!6;CL:0000677!1.06e-17!6;CL:0000212!1.06e-17!6;CL:0000584!1.06e-17!6;CL:0000075!3.78e-15!7;CL:0002563!9.74e-12!9;CL:0002251!9.74e-12!9;CL:0000066!1.46e-07!25;CL:0002076!6.09e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.13e-15,6;CL:0000677,1.13e-15,6;CL:0000584,1.13e-15,6;CL:0000075,1.34e-13,7;CL:0002563,8.07e-11,9;CL:0002251,8.07e-11,9;CL:0000066,9.87e-09,25;CL:0000682,1.88e-08,3;CL:0002076,6.77e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.22e-22!15;UBERON:0001242!2.19e-15!13;UBERON:0000060!2.19e-15!13;UBERON:0001262!2.19e-15!13;UBERON:0004786!2.19e-15!13;UBERON:0000160!4.71e-14!43;UBERON:0004923!3.75e-13!24;UBERON:0005409!4.90e-13!59;UBERON:0003350!9.74e-12!9;UBERON:0004808!9.74e-12!9;UBERON:0001277!9.74e-12!9;UBERON:0001962!1.25e-09!2;UBERON:0001961!1.25e-09!2;UBERON:0001744!1.25e-09!2;UBERON:0000485!1.46e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,5.32e-16,13;UBERON:0001262,5.32e-16,13;UBERON:0004786,5.32e-16,13;UBERON:0000344,5.35e-14,15;UBERON:0003350,8.07e-11,9;UBERON:0004808,8.07e-11,9;UBERON:0001277,8.07e-11,9;UBERON:0004923,4.35e-09,24;UBERON:0000485,4.82e-09,11;UBERON:0000331,1.59e-08,3;UBERON:0002116,1.59e-08,3;UBERON:0001204,1.59e-08,3;UBERON:0001168,1.59e-08,3;UBERON:0000160,3.20e-07,31 | |||
|phase1_expression=0,0.348975407639361,0,0.30246421130683,0.500895729946347,3.3575854382378,9.81173090501208,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.799962113967033,0.91763712426868,0,1.29228598847722,0.430942465371778,1.33016393619462,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr7:28902402..28902411,+ | |||
}} |
Revision as of 13:00, 14 September 2013
Short description: | p@chr7:28902402..28902411, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:28902402..28902411, + |
Coexpression cluster: | MCL_coexpression_mm9:273 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.13e-15 | 6 |
gut absorptive cell | 1.13e-15 | 6 |
enterocyte | 1.13e-15 | 6 |
columnar/cuboidal epithelial cell | 1.34e-13 | 7 |
intestinal epithelial cell | 8.07e-11 | 9 |
epithelial cell of alimentary canal | 8.07e-11 | 9 |
epithelial cell | 9.87e-09 | 25 |
M cell of gut | 1.88e-08 | 3 |
endo-epithelial cell | 6.77e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 5.32e-16 | 13 |
wall of intestine | 5.32e-16 | 13 |
gastrointestinal system mucosa | 5.32e-16 | 13 |
mucosa | 5.35e-14 | 15 |
epithelium of mucosa | 8.07e-11 | 9 |
gastrointestinal system epithelium | 8.07e-11 | 9 |
intestinal epithelium | 8.07e-11 | 9 |
organ component layer | 4.35e-09 | 24 |
simple columnar epithelium | 4.82e-09 | 11 |
ileal mucosa | 1.59e-08 | 3 |
ileum | 1.59e-08 | 3 |
mucosa of small intestine | 1.59e-08 | 3 |
wall of small intestine | 1.59e-08 | 3 |
intestine | 3.20e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.