FFCP PHASE1:Mm9::chr7:28870210..28870231,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=273|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:28870210..28870231,+|id=chr7:28870210..28870231,+|ontology_enrichment_celltype=CL:0002563!1.08e-11!9;CL:0002251!1.08e-11!9;CL:0000239!8.25e-10!6;CL:0000677!8.25e-10!6;CL:0000212!8.25e-10!6;CL:0000584!8.25e-10!6;CL:0000075!2.38e-08!7|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.31e-29!43;UBERON:0000344!2.28e-24!15;UBERON:0005409!1.79e-23!59;UBERON:0001242!4.59e-20!13;UBERON:0000060!4.59e-20!13;UBERON:0001262!4.59e-20!13;UBERON:0004786!4.59e-20!13;UBERON:0004923!4.40e-14!24;UBERON:0003350!1.08e-11!9;UBERON:0004808!1.08e-11!9;UBERON:0001277!1.08e-11!9;UBERON:0001007!4.68e-10!128;UBERON:0001555!4.68e-10!128;UBERON:0007026!4.68e-10!128;UBERON:0004119!8.52e-10!130;UBERON:0000925!8.52e-10!130;UBERON:0006595!8.52e-10!130;UBERON:0000485!2.24e-09!11;UBERON:0004921!2.18e-08!126;UBERON:0004185!2.18e-08!126;UBERON:0000331!2.78e-08!3;UBERON:0002116!2.78e-08!3;UBERON:0001204!2.78e-08!3;UBERON:0001168!2.78e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.65e-35,31;UBERON:0005409,3.24e-25,47;UBERON:0002108,4.24e-17,4;UBERON:0000344,8.19e-17,15;UBERON:0000331,4.25e-13,3;UBERON:0002116,4.25e-13,3;UBERON:0001204,4.25e-13,3;UBERON:0001168,4.25e-13,3;UBERON:0001242,3.07e-11,13;UBERON:0001262,3.07e-11,13;UBERON:0004786,3.07e-11,13;UBERON:0001007,6.36e-11,116;UBERON:0001555,6.36e-11,116;UBERON:0007026,6.36e-11,116;UBERON:0004119,1.11e-10,118;UBERON:0000925,1.11e-10,118;UBERON:0006595,1.11e-10,118;UBERON:0004923,4.25e-10,24;UBERON:0001962,4.29e-09,2;UBERON:0001961,4.29e-09,2;UBERON:0001744,4.29e-09,2;UBERON:0001155,4.71e-09,2;UBERON:0000059,4.71e-09,2;UBERON:0004921,1.37e-08,114|phase1_expression=0,0,0.909998478779072,0.60492842261366,0.500895729946347,8.05820505177071,18.9226238882376,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,3.99981056983517,2.98232065387321,0,3.4460959692726,4.52489588640367,9.12112413390595,5.54466285471848,1.77384408524244,0,0,0,0,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,1.85115396664481,0,0,0,0.403367049246685,0,0.380451252225118,7.59246498471219,1.81168850196412,1.75934646160189,1.39269530428806,0.974820435595601,6.29173586057955,3.24207074812041,3.78368419183298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0,0,0,0,6.41257840585672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655087691238533,0,0,0,2.59229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0,0,0,0,0,0,0,0,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr7:28870210..28870231,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=273 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:28870210..28870231,+ | |||
|id=chr7:28870210..28870231,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.08e-11!9;CL:0002251!1.08e-11!9;CL:0000239!8.25e-10!6;CL:0000677!8.25e-10!6;CL:0000212!8.25e-10!6;CL:0000584!8.25e-10!6;CL:0000075!2.38e-08!7 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.31e-29!43;UBERON:0000344!2.28e-24!15;UBERON:0005409!1.79e-23!59;UBERON:0001242!4.59e-20!13;UBERON:0000060!4.59e-20!13;UBERON:0001262!4.59e-20!13;UBERON:0004786!4.59e-20!13;UBERON:0004923!4.40e-14!24;UBERON:0003350!1.08e-11!9;UBERON:0004808!1.08e-11!9;UBERON:0001277!1.08e-11!9;UBERON:0001007!4.68e-10!128;UBERON:0001555!4.68e-10!128;UBERON:0007026!4.68e-10!128;UBERON:0004119!8.52e-10!130;UBERON:0000925!8.52e-10!130;UBERON:0006595!8.52e-10!130;UBERON:0000485!2.24e-09!11;UBERON:0004921!2.18e-08!126;UBERON:0004185!2.18e-08!126;UBERON:0000331!2.78e-08!3;UBERON:0002116!2.78e-08!3;UBERON:0001204!2.78e-08!3;UBERON:0001168!2.78e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.65e-35,31;UBERON:0005409,3.24e-25,47;UBERON:0002108,4.24e-17,4;UBERON:0000344,8.19e-17,15;UBERON:0000331,4.25e-13,3;UBERON:0002116,4.25e-13,3;UBERON:0001204,4.25e-13,3;UBERON:0001168,4.25e-13,3;UBERON:0001242,3.07e-11,13;UBERON:0001262,3.07e-11,13;UBERON:0004786,3.07e-11,13;UBERON:0001007,6.36e-11,116;UBERON:0001555,6.36e-11,116;UBERON:0007026,6.36e-11,116;UBERON:0004119,1.11e-10,118;UBERON:0000925,1.11e-10,118;UBERON:0006595,1.11e-10,118;UBERON:0004923,4.25e-10,24;UBERON:0001962,4.29e-09,2;UBERON:0001961,4.29e-09,2;UBERON:0001744,4.29e-09,2;UBERON:0001155,4.71e-09,2;UBERON:0000059,4.71e-09,2;UBERON:0004921,1.37e-08,114 | |||
|phase1_expression=0,0,0.909998478779072,0.60492842261366,0.500895729946347,8.05820505177071,18.9226238882376,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,3.99981056983517,2.98232065387321,0,3.4460959692726,4.52489588640367,9.12112413390595,5.54466285471848,1.77384408524244,0,0,0,0,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,1.85115396664481,0,0,0,0.403367049246685,0,0.380451252225118,7.59246498471219,1.81168850196412,1.75934646160189,1.39269530428806,0.974820435595601,6.29173586057955,3.24207074812041,3.78368419183298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0,0,0,0,6.41257840585672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655087691238533,0,0,0,2.59229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0,0,0,0,0,0,0,0,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr7:28870210..28870231,+ | |||
}} |
Revision as of 13:00, 14 September 2013
Short description: | p@chr7:28870210..28870231, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:28870210..28870231, + |
Coexpression cluster: | MCL_coexpression_mm9:273 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.65e-35 | 31 |
gastrointestinal system | 3.24e-25 | 47 |
small intestine | 4.24e-17 | 4 |
mucosa | 8.19e-17 | 15 |
ileal mucosa | 4.25e-13 | 3 |
ileum | 4.25e-13 | 3 |
mucosa of small intestine | 4.25e-13 | 3 |
wall of small intestine | 4.25e-13 | 3 |
intestinal mucosa | 3.07e-11 | 13 |
wall of intestine | 3.07e-11 | 13 |
gastrointestinal system mucosa | 3.07e-11 | 13 |
digestive system | 6.36e-11 | 116 |
digestive tract | 6.36e-11 | 116 |
primitive gut | 6.36e-11 | 116 |
endoderm-derived structure | 1.11e-10 | 118 |
endoderm | 1.11e-10 | 118 |
presumptive endoderm | 1.11e-10 | 118 |
organ component layer | 4.25e-10 | 24 |
gut-associated lymphoid tissue | 4.29e-09 | 2 |
mucosa-associated lymphoid tissue | 4.29e-09 | 2 |
lymphoid tissue | 4.29e-09 | 2 |
colon | 4.71e-09 | 2 |
large intestine | 4.71e-09 | 2 |
subdivision of digestive tract | 1.37e-08 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.