FFCP PHASE1:Mm9::chr7:26022738..26022749,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=606496|HGNC=|UniProt=Q2NL51,D3Z7E5|association_with_transcript=120bp_to_ENSMUST00000071739,ENSMUST00000108411,NM_001031667,uc009frx.1_5end|description=CAGE_peak_2_at_Gsk3a_5end|id=chr7:26022738..26022749,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.14e-10!75;UBERON:0001016!3.14e-10!75;UBERON:0001017!5.67e-10!73;UBERON:0005743!5.67e-10!73;UBERON:0000153!1.83e-09!94;UBERON:0004121!3.92e-09!102;UBERON:0000924!3.92e-09!102;UBERON:0006601!3.92e-09!102;UBERON:0001049!4.98e-09!52;UBERON:0005068!4.98e-09!52;UBERON:0006241!4.98e-09!52;UBERON:0007135!4.98e-09!52;UBERON:0007811!2.27e-08!86;UBERON:0002020!1.13e-07!34;UBERON:0002346!3.00e-07!71;UBERON:0003075!3.00e-07!71;UBERON:0007284!3.00e-07!71;UBERON:0000955!3.42e-07!50;UBERON:0006238!3.42e-07!50;UBERON:0002616!4.59e-07!49;UBERON:0000064!5.22e-07!99;UBERON:0000033!9.09e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.82e-11,95;UBERON:0000924,1.82e-11,95;UBERON:0006601,1.82e-11,95;UBERON:0001016,5.80e-11,75;UBERON:0001017,1.16e-10,73;UBERON:0010371,2.79e-10,73;UBERON:0001049,1.26e-09,52;UBERON:0005068,1.26e-09,52;UBERON:0006241,1.26e-09,52;UBERON:0007135,1.26e-09,52;UBERON:0000073,1.32e-09,54;UBERON:0002346,1.35e-09,64;UBERON:0003075,1.35e-09,64;UBERON:0007284,1.35e-09,64;UBERON:0000955,1.18e-07,47;UBERON:0006238,1.18e-07,47;UBERON:0002020,1.32e-07,34;UBERON:0002616,1.66e-07,46|phase1_expression=1.60148847104794,8.02643437570531,5.91499011206397,7.25914107136392,6.01074875935617,2.01455126294268,0.934450562382103,0.258246646883153,2.39340827657833,1.63845168425395,0.68487187290202,0.717949430958028,0.342401459862411,0.34968160967599,0.666219523631325,0.404950534779652,0.699561878128147,0.157731082679119,0.411343300817216,0.42438965179803,2.29616883407888,0.0992909512008853,0.783599367416806,0.47997726838022,0.68822784320151,3.44539178469012,2.58457197695445,1.29282739611533,1.33016393619462,0.504060259519861,0.886922042621219,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0.408338712524738,0.837063261473815,0,0,1.76469446409304,0.683045484958446,0.485510353031154,0.755380907853464,0.709638518536602,1.10128051297009,3.12956537739216,1.09012578190223,1.09843091367236,1.74986909166855,1.1198913730029,4.31257693094915,0.335565212115473,1.45072428402269,0.336093799142464,0.514518872071894,0.85960031981627,1.03134418455488,1.61853168687678,1.5869729378161,0.633831403506179,2.03306719241479,0.889294796111139,0,0,0,0.898800331555214,1.53687322128622,0.933206510776299,1.21505344498522,1.89292465216244,4.28476476605705,2.65042249141936,0.857435594504678,1.0543001812006,0.919218786610021,0,1.91531007127782,3.07213066512487,1.71452174049252,2.47016637726506,0.52091337055676,2.51264699101243,2.8138130501584,1.98637722109853,1.76777151284201,3.27454865837937,0.931997229126503,1.28734528666413,1.20914496170857,0.579728977403356,0,2.719885334831,1.07940638327563,0.649776417447669,0.896053774194671,1.40444420131752,0.681721290312231,0.259786004602869,0.35333957451034,1.54927761754349,2.56652954828636,2.54805239706646,7.11066703153331,0.432982082022428,0,0,1.37020655662872,0.517875767294343,0.593768556259299,1.04091196059682,0.913396434936424,0.230615497256059,0.60289056221049,0.587943535678524,1.38233250462643,1.23597483867187,3.32578520915797,0,0.970601099684455,1.32504911076236,0.969750506270444,1.86391761218122,1.46390398505774,2.30391377494801,0.510914110417183,0.359445373517761,1.19980546198682,0.381210681219194,2.39665023047716,2.28750301409313,1.13088916901578,2.78118912307642,4.09144731728529,1.45451631191692,1.94689515681309,0.712875546952214,1.24406970610093,1.51633655060205,1.26265113531884,0.390361328888111,2.06911893990126,0.540186389416048,1.50704817835715,1.56483948048054,0.384341160854549,1.68663104207512,0.258703370739016,1.94011193639558,1.13463648100692,1.75951124163949,1.53437012699302,0.834141747676794,2.089512999133,1.4404749548556,1.19420560091096,0.702213187313235,0,0.568326998791185,0.828503090142008,0.469052119962192,0.720248245844059,0.23674473558521,0.393528463494808,1.23413690309903,0.930135779001631,1.3413670069981,1.75148013550754,0.822799249567402,0.985004784474571,1.29710095273369,1.02339991197733,0.878200461164203,1.07365135008297,2.73376933133365,1.44066457330998,2.97376904685418,2.11560453330835,0.426576501070468,0.232236671860439,0.902072229254653,0.80673409849337,0.667134131534611,0.570676878337677,0.949058123089023,1.4822905925161,2.01068167040216,0.994782360205754,0.779856348476481,0.898819408654221,2.16138049874694,0.398282546508734,0.948339504765408,0.685491075658373,1.1270773567308,0.407302655690628,0.193952487167626,0.701358198903186,0.885311519739602,0.738050739898011,0.470996183524124,0.740382983530803,1.1858105083486,0.500535317148282,0.786235980452812,0.449724224769707,1.01430060694251,0.964708639009667,0.50925170356284,0.287696137450811,1.45921704097532,0,0,1.116422843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| ||
|EntrezGene=606496 | |||
|HGNC= | |||
|UniProt=Q2NL51,D3Z7E5 | |||
|association_with_transcript=120bp_to_ENSMUST00000071739,ENSMUST00000108411,NM_001031667,uc009frx.1_5end | |||
|description=CAGE_peak_2_at_Gsk3a_5end | |||
|id=chr7:26022738..26022749,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.14e-10!75;UBERON:0001016!3.14e-10!75;UBERON:0001017!5.67e-10!73;UBERON:0005743!5.67e-10!73;UBERON:0000153!1.83e-09!94;UBERON:0004121!3.92e-09!102;UBERON:0000924!3.92e-09!102;UBERON:0006601!3.92e-09!102;UBERON:0001049!4.98e-09!52;UBERON:0005068!4.98e-09!52;UBERON:0006241!4.98e-09!52;UBERON:0007135!4.98e-09!52;UBERON:0007811!2.27e-08!86;UBERON:0002020!1.13e-07!34;UBERON:0002346!3.00e-07!71;UBERON:0003075!3.00e-07!71;UBERON:0007284!3.00e-07!71;UBERON:0000955!3.42e-07!50;UBERON:0006238!3.42e-07!50;UBERON:0002616!4.59e-07!49;UBERON:0000064!5.22e-07!99;UBERON:0000033!9.09e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.82e-11,95;UBERON:0000924,1.82e-11,95;UBERON:0006601,1.82e-11,95;UBERON:0001016,5.80e-11,75;UBERON:0001017,1.16e-10,73;UBERON:0010371,2.79e-10,73;UBERON:0001049,1.26e-09,52;UBERON:0005068,1.26e-09,52;UBERON:0006241,1.26e-09,52;UBERON:0007135,1.26e-09,52;UBERON:0000073,1.32e-09,54;UBERON:0002346,1.35e-09,64;UBERON:0003075,1.35e-09,64;UBERON:0007284,1.35e-09,64;UBERON:0000955,1.18e-07,47;UBERON:0006238,1.18e-07,47;UBERON:0002020,1.32e-07,34;UBERON:0002616,1.66e-07,46 | |||
|phase1_expression=1.60148847104794,8.02643437570531,5.91499011206397,7.25914107136392,6.01074875935617,2.01455126294268,0.934450562382103,0.258246646883153,2.39340827657833,1.63845168425395,0.68487187290202,0.717949430958028,0.342401459862411,0.34968160967599,0.666219523631325,0.404950534779652,0.699561878128147,0.157731082679119,0.411343300817216,0.42438965179803,2.29616883407888,0.0992909512008853,0.783599367416806,0.47997726838022,0.68822784320151,3.44539178469012,2.58457197695445,1.29282739611533,1.33016393619462,0.504060259519861,0.886922042621219,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0.408338712524738,0.837063261473815,0,0,1.76469446409304,0.683045484958446,0.485510353031154,0.755380907853464,0.709638518536602,1.10128051297009,3.12956537739216,1.09012578190223,1.09843091367236,1.74986909166855,1.1198913730029,4.31257693094915,0.335565212115473,1.45072428402269,0.336093799142464,0.514518872071894,0.85960031981627,1.03134418455488,1.61853168687678,1.5869729378161,0.633831403506179,2.03306719241479,0.889294796111139,0,0,0,0.898800331555214,1.53687322128622,0.933206510776299,1.21505344498522,1.89292465216244,4.28476476605705,2.65042249141936,0.857435594504678,1.0543001812006,0.919218786610021,0,1.91531007127782,3.07213066512487,1.71452174049252,2.47016637726506,0.52091337055676,2.51264699101243,2.8138130501584,1.98637722109853,1.76777151284201,3.27454865837937,0.931997229126503,1.28734528666413,1.20914496170857,0.579728977403356,0,2.719885334831,1.07940638327563,0.649776417447669,0.896053774194671,1.40444420131752,0.681721290312231,0.259786004602869,0.35333957451034,1.54927761754349,2.56652954828636,2.54805239706646,7.11066703153331,0.432982082022428,0,0,1.37020655662872,0.517875767294343,0.593768556259299,1.04091196059682,0.913396434936424,0.230615497256059,0.60289056221049,0.587943535678524,1.38233250462643,1.23597483867187,3.32578520915797,0,0.970601099684455,1.32504911076236,0.969750506270444,1.86391761218122,1.46390398505774,2.30391377494801,0.510914110417183,0.359445373517761,1.19980546198682,0.381210681219194,2.39665023047716,2.28750301409313,1.13088916901578,2.78118912307642,4.09144731728529,1.45451631191692,1.94689515681309,0.712875546952214,1.24406970610093,1.51633655060205,1.26265113531884,0.390361328888111,2.06911893990126,0.540186389416048,1.50704817835715,1.56483948048054,0.384341160854549,1.68663104207512,0.258703370739016,1.94011193639558,1.13463648100692,1.75951124163949,1.53437012699302,0.834141747676794,2.089512999133,1.4404749548556,1.19420560091096,0.702213187313235,0,0.568326998791185,0.828503090142008,0.469052119962192,0.720248245844059,0.23674473558521,0.393528463494808,1.23413690309903,0.930135779001631,1.3413670069981,1.75148013550754,0.822799249567402,0.985004784474571,1.29710095273369,1.02339991197733,0.878200461164203,1.07365135008297,2.73376933133365,1.44066457330998,2.97376904685418,2.11560453330835,0.426576501070468,0.232236671860439,0.902072229254653,0.80673409849337,0.667134131534611,0.570676878337677,0.949058123089023,1.4822905925161,2.01068167040216,0.994782360205754,0.779856348476481,0.898819408654221,2.16138049874694,0.398282546508734,0.948339504765408,0.685491075658373,1.1270773567308,0.407302655690628,0.193952487167626,0.701358198903186,0.885311519739602,0.738050739898011,0.470996183524124,0.740382983530803,1.1858105083486,0.500535317148282,0.786235980452812,0.449724224769707,1.01430060694251,0.964708639009667,0.50925170356284,0.287696137450811,1.45921704097532,0,0,1.11642284300551,0.312037673114561,1.01031551178845,0.358794827043824,0.964887042726734,0.554259570499814,1.13694847062291,0.814824882210129,0,0.469380496577004,1.34005005953453,0,1.95133647857799,0.472905432318573,0.664394068946325,0.318909537314974,0,0.690739927463582,0.723245292907558,0,0.54390568381871,1.47529281905711,1.10374698521893,2.88991061978026,1.52375192569864,1.14754461763673,2.01976741763498,1.26203287766503,1.95219372148319,0.861693590931196,0.238968797952552,0.891194696329576,0,1.61924280669958,0.876767573733936,1.97643888973262,1.28528526568723,0.851640511249612,1.42452482933804,0.651547837414304,0.659880491890142,0,0.485561272309963,0.906970670894253,0.377210159511796,0.295301892880773,0.922305443831782,1.29214146584111,0.727067458955011,0,0.632073515871632,1.05418608574999,0,1.02131881726136,0.18006109403131,0.776152102696527,0.214337035031592,0.532020700926821,0.713475270408282,1.48094118541909,1.522324745573,0.469343416127421,0.42366414172764,0.882113592219848,1.15420377059036,0.968786560175433,0.904693873922338,1.07435109602823,1.80554989719567,1.1659233465194,2.78137953015765,0.341741761595705,0.412773735926445,0.740778109478847,0.753473828018764,0.956859594047176,1.37266903923914,1.18984900995699,0.979660166265606,1.38199973804424,0,1.10717597753397,0.813277868507395,1.08005340821801,0.209088296014469,0.655087691238533,1.07891477107857,1.23980183588004,0.523511883968059,0.777689839750757,0,0,0.747582730219894,1.15820943319968,0.972255941720238,0.645799117388655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| |||
|short_description=p2@Gsk3a | |||
}} |
Revision as of 12:53, 14 September 2013
Short description: | p2@Gsk3a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gsk3a_5end |
Coexpression cluster: | NA |
Association with transcript: | 120bp_to_ENSMUST00000071739, ENSMUST00000108411, NM_001031667, uc009frx.1_5end |
EntrezGene: | Gsk3a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.82e-11 | 95 |
ectoderm | 1.82e-11 | 95 |
presumptive ectoderm | 1.82e-11 | 95 |
nervous system | 5.80e-11 | 75 |
central nervous system | 1.16e-10 | 73 |
ecto-epithelium | 2.79e-10 | 73 |
neural tube | 1.26e-09 | 52 |
neural rod | 1.26e-09 | 52 |
future spinal cord | 1.26e-09 | 52 |
neural keel | 1.26e-09 | 52 |
regional part of nervous system | 1.32e-09 | 54 |
neurectoderm | 1.35e-09 | 64 |
neural plate | 1.35e-09 | 64 |
presumptive neural plate | 1.35e-09 | 64 |
brain | 1.18e-07 | 47 |
future brain | 1.18e-07 | 47 |
gray matter | 1.32e-07 | 34 |
regional part of brain | 1.66e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.