FFCP PHASE1:Hg19::chrX:70288162..70288233,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=29934 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14976 | |||
|TSSclassifier=S | |||
|UniProt=Q3SYF1,Q9UMY4 | |||
|association_with_transcript=0bp_to_ENST00000490561,NM_013346,uc004dyp.1,uc004dyr.1_5end | |||
|description=CAGE_peak_1_at_SNX12_5end | |||
|id=chrX:70288162..70288233,- | |||
|ontology_enrichment_celltype=CL:0002321!2.40e-22!248;CL:0000220!1.73e-21!246;CL:0000222!1.23e-14!119;CL:0000066!2.34e-12!254;CL:0000055!4.25e-10!180;CL:0000183!1.62e-09!59;CL:0000115!6.62e-09!35;CL:0002078!1.26e-08!44;CL:0000213!4.67e-08!57;CL:0000215!4.67e-08!57;CL:0000192!8.41e-08!42;CL:0000514!8.41e-08!42;CL:0000710!9.61e-08!20;CL:0000393!1.10e-07!60;CL:0000211!1.10e-07!60;CL:0000680!1.14e-07!57;CL:0000056!1.14e-07!57;CL:0000355!1.14e-07!57;CL:0000187!1.43e-07!54;CL:0002077!4.10e-07!33;CL:0000359!5.90e-07!32;CL:0002139!6.85e-07!24 | |||
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|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@SNX12 | |||
}} |
Revision as of 12:24, 14 September 2013
Short description: | p1@SNX12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SNX12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000490561, NM_013346, uc004dyp.1, uc004dyr.1_5end |
EntrezGene: | SNX12 |
HGNC: | 14976 |
UniProt: | Q3SYF1Q9UMY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.51e-23 | 250 |
mesodermal cell | 2.54e-15 | 121 |
epithelial cell | 3.89e-12 | 253 |
endothelial cell | 2.26e-09 | 36 |
meso-epithelial cell | 4.64e-09 | 45 |
lining cell | 1.88e-08 | 58 |
barrier cell | 1.88e-08 | 58 |
smooth muscle cell | 4.57e-08 | 43 |
smooth muscle myoblast | 4.57e-08 | 43 |
electrically responsive cell | 6.22e-08 | 61 |
electrically active cell | 6.22e-08 | 61 |
muscle precursor cell | 6.41e-08 | 58 |
myoblast | 6.41e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.41e-08 | 58 |
muscle cell | 8.04e-08 | 55 |
neurecto-epithelial cell | 9.61e-08 | 20 |
ecto-epithelial cell | 1.32e-07 | 34 |
vascular associated smooth muscle cell | 5.90e-07 | 32 |
endothelial cell of vascular tree | 6.85e-07 | 24 |
ectodermal cell | 9.23e-07 | 72 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.