FFCP PHASE1:Hg19::chrX:56259106..56259140,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11279|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6351|TSSclassifier=S|UniProt=|association_with_transcript=199bp_to_ENST00000462627_5end|description=CAGE_peak_8_at_KLF8_5end|id=chrX:56259106..56259140,+|ontology_enrichment_celltype=CL:0000039!1.83e-07!7;CL:0000586!1.83e-07!7;CL:0002322!4.92e-07!5|ontology_enrichment_celltype_v019=CL:0000039;2.06e-12;7!CL:0000586;2.06e-12;7!CL:0002541;6.56e-08;3!CL:0002623;6.56e-08;3|ontology_enrichment_celltype_v019_2=CL:0000039,2.37e-12,7;CL:0000586,2.37e-12,7;CL:0002623,6.34e-08,3;CL:0002541,8.29e-08,3|ontology_enrichment_development_v019=UBERON:0009117;5.68e-09;10!UBERON:0005564;5.68e-09;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1799;4.66e-21;1!DOID:10165;4.66e-21;1!DOID:1798;4.66e-21;1|ontology_enrichment_disease_v019_2=DOID:1799,5.16e-21,1;DOID:10165,5.16e-21,1;DOID:1798,5.16e-21,1|ontology_enrichment_uberon=UBERON:0007023!6.98e-15!115;UBERON:0001869!8.46e-14!32;UBERON:0001893!1.26e-12!34;UBERON:0001950!1.27e-12!20;UBERON:0002619!1.52e-12!22;UBERON:0002020!1.91e-12!34;UBERON:0003528!1.91e-12!34;UBERON:0002791!8.55e-12!33;UBERON:0001049!1.19e-10!57;UBERON:0005068!1.19e-10!57;UBERON:0006241!1.19e-10!57;UBERON:0007135!1.19e-10!57;UBERON:0002780!1.55e-10!41;UBERON:0001890!1.55e-10!41;UBERON:0006240!1.55e-10!41;UBERON:0000956!1.59e-10!25;UBERON:0000203!1.59e-10!25;UBERON:0003080!3.89e-10!42;UBERON:0002616!5.01e-10!59;UBERON:0000033!5.14e-10!123;UBERON:0001017!5.31e-10!82;UBERON:0004121!6.30e-10!169;UBERON:0005743!9.87e-10!86;UBERON:0000153!1.34e-09!129;UBERON:0007811!1.34e-09!129;UBERON:0000924!2.31e-09!173;UBERON:0006601!2.31e-09!173;UBERON:0000955!7.94e-09!69;UBERON:0006238!7.94e-09!69;UBERON:0000073!6.16e-08!94;UBERON:0001016!6.16e-08!94;UBERON:0000200!1.23e-07!6;UBERON:0003075!1.57e-07!86;UBERON:0007284!1.57e-07!86;UBERON:0003056!4.11e-07!61;UBERON:0002346!7.76e-07!90|ontology_enrichment_uberon_v019=UBERON:0002702;3.18e-11;2!UBERON:0000473;5.55e-11;8!UBERON:0000922;1.19e-09;49!UBERON:0001950;3.54e-09;20!UBERON:0002619;1.98e-08;22!UBERON:0003135;3.08e-08;11!UBERON:0001870;6.56e-08;3!UBERON:0003124;6.56e-08;3!UBERON:0000920;6.56e-08;3!UBERON:0000956;1.60e-07;25!UBERON:0000203;1.60e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0002702,2.47e-11,2;UBERON:0000473,6.29e-11,8;UBERON:0001950,3.45e-09,20;UBERON:0002619,1.93e-08,22;UBERON:0003135,3.37e-08,11;UBERON:0001870,5.54e-08,3;UBERON:0000920,8.29e-08,3;UBERON:0000956,1.56e-07,25;UBERON:0000203,1.56e-07,25|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0.587237189370939,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.609868530647977,0.530119073285941,0.232387885739037,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.201057944823262,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0.773288812777695,0.502548796003046,0,0,0,0,0,0,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0.192190067365106,0.510450849978337,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.71623345421307,0.296964680832639,0.614321404198464,0,0.140669416410513,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.442317039724898,0.295547618953547,0.219385397153973,0.10893846351899,0,0.230850775511391,0,0.922255617552241,0.0897576444097721,0.325942115766024,0.957003479195758,0.732780747214898,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,1.224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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11279 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6351 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=199bp_to_ENST00000462627_5end | |||
|description=CAGE_peak_8_at_KLF8_5end | |||
|id=chrX:56259106..56259140,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.83e-07!7;CL:0000586!1.83e-07!7;CL:0002322!4.92e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.06e-12;7!CL:0000586;2.06e-12;7!CL:0002541;6.56e-08;3!CL:0002623;6.56e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.37e-12,7;CL:0000586,2.37e-12,7;CL:0002623,6.34e-08,3;CL:0002541,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.68e-09;10!UBERON:0005564;5.68e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;4.66e-21;1!DOID:10165;4.66e-21;1!DOID:1798;4.66e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,5.16e-21,1;DOID:10165,5.16e-21,1;DOID:1798,5.16e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.98e-15!115;UBERON:0001869!8.46e-14!32;UBERON:0001893!1.26e-12!34;UBERON:0001950!1.27e-12!20;UBERON:0002619!1.52e-12!22;UBERON:0002020!1.91e-12!34;UBERON:0003528!1.91e-12!34;UBERON:0002791!8.55e-12!33;UBERON:0001049!1.19e-10!57;UBERON:0005068!1.19e-10!57;UBERON:0006241!1.19e-10!57;UBERON:0007135!1.19e-10!57;UBERON:0002780!1.55e-10!41;UBERON:0001890!1.55e-10!41;UBERON:0006240!1.55e-10!41;UBERON:0000956!1.59e-10!25;UBERON:0000203!1.59e-10!25;UBERON:0003080!3.89e-10!42;UBERON:0002616!5.01e-10!59;UBERON:0000033!5.14e-10!123;UBERON:0001017!5.31e-10!82;UBERON:0004121!6.30e-10!169;UBERON:0005743!9.87e-10!86;UBERON:0000153!1.34e-09!129;UBERON:0007811!1.34e-09!129;UBERON:0000924!2.31e-09!173;UBERON:0006601!2.31e-09!173;UBERON:0000955!7.94e-09!69;UBERON:0006238!7.94e-09!69;UBERON:0000073!6.16e-08!94;UBERON:0001016!6.16e-08!94;UBERON:0000200!1.23e-07!6;UBERON:0003075!1.57e-07!86;UBERON:0007284!1.57e-07!86;UBERON:0003056!4.11e-07!61;UBERON:0002346!7.76e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002702;3.18e-11;2!UBERON:0000473;5.55e-11;8!UBERON:0000922;1.19e-09;49!UBERON:0001950;3.54e-09;20!UBERON:0002619;1.98e-08;22!UBERON:0003135;3.08e-08;11!UBERON:0001870;6.56e-08;3!UBERON:0003124;6.56e-08;3!UBERON:0000920;6.56e-08;3!UBERON:0000956;1.60e-07;25!UBERON:0000203;1.60e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002702,2.47e-11,2;UBERON:0000473,6.29e-11,8;UBERON:0001950,3.45e-09,20;UBERON:0002619,1.93e-08,22;UBERON:0003135,3.37e-08,11;UBERON:0001870,5.54e-08,3;UBERON:0000920,8.29e-08,3;UBERON:0000956,1.56e-07,25;UBERON:0000203,1.56e-07,25 | |||
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|short_description=p8@KLF8 | |||
}} |
Revision as of 12:17, 14 September 2013
Short description: | p8@KLF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_KLF8_5end |
Coexpression cluster: | NA |
Association with transcript: | 199bp_to_ENST00000462627_5end |
EntrezGene: | KLF8 |
HGNC: | 6351 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.37e-12 | 7 |
germ cell | 2.37e-12 | 7 |
acinar cell of salivary gland | 6.34e-08 | 3 |
chorionic membrane mesenchymal stem cell | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 2.47e-11 | 2 |
testis | 6.29e-11 | 8 |
neocortex | 3.45e-09 | 20 |
regional part of cerebral cortex | 1.93e-08 | 22 |
male reproductive organ | 3.37e-08 | 11 |
frontal cortex | 5.54e-08 | 3 |
egg chorion | 8.29e-08 | 3 |
cerebral cortex | 1.56e-07 | 25 |
pallium | 1.56e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 5.16e-21 | 1 |
endocrine pancreas cancer | 5.16e-21 | 1 |
pancreatic endocrine carcinoma | 5.16e-21 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.