FFCP PHASE1:Hg19::chrX:53743451..53743487,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C763|description=CAGE_peak_at_chrX:53743451..53743487,-|id=chrX:53743451..53743487,-|ontology_enrichment_celltype=CL:0002031!7.44e-29!124;CL:0002087!2.07e-27!119;CL:0000738!4.73e-27!140;CL:0000988!6.70e-23!182;CL:0002032!3.82e-21!165;CL:0000837!3.82e-21!165;CL:0000037!6.65e-21!172;CL:0000566!6.65e-21!172;CL:0002057!2.76e-18!42;CL:0000860!1.04e-16!45;CL:0000838!1.97e-16!52;CL:0000542!5.17e-16!53;CL:0000051!5.17e-16!53;CL:0000945!2.98e-13!24;CL:0000826!2.98e-13!24;CL:0000557!4.02e-13!71;CL:0002009!3.67e-12!65;CL:0000839!3.97e-12!70;CL:0000766!5.69e-12!76;CL:0002194!1.98e-11!63;CL:0000576!1.98e-11!63;CL:0000040!1.98e-11!63;CL:0000559!1.98e-11!63;CL:0000763!7.51e-08!112;CL:0000049!7.51e-08!112;CL:0000623!9.60e-08!3;CL:0000825!9.60e-08!3;CL:0000080!1.18e-07!6|ontology_enrichment_celltype_v019=CL:0000860;1.15e-20;33!CL:0002057;1.15e-20;33!CL:0000473;1.76e-14;39!CL:0000234;1.76e-14;39!CL:0002087;1.36e-13;104!CL:0000945;4.84e-13;24!CL:0000576;5.34e-13;48!CL:0000766;2.24e-11;69!CL:0002393;2.99e-10;6!CL:0002397;2.99e-10;6!CL:0000738;1.43e-08;136!CL:0000946;9.94e-08;1!CL:0000786;9.94e-08;1|ontology_enrichment_celltype_v019_2=CL:0002087,9.92e-29,115;CL:0000860,3.58e-28,42;CL:0002057,3.58e-28,42;CL:0002031,2.34e-27,120;CL:0000738,7.13e-26,136;CL:0000988,7.85e-25,177;CL:0000473,2.58e-24,48;CL:0000234,2.58e-24,48;CL:0002032,3.61e-21,161;CL:0000837,3.61e-21,161;CL:0000037,4.23e-20,168;CL:0002194,6.53e-19,59;CL:0000576,6.53e-19,59;CL:0000040,6.53e-19,59;CL:0000559,6.53e-19,59;CL:0002009,3.25e-18,61;CL:0000766,2.11e-17,72;CL:0000839,1.18e-16,66;CL:0000557,2.28e-16,67;CL:0000945,5.13e-13,24;CL:0000826,5.13e-13,24;CL:0000838,2.58e-11,52;CL:0000542,4.54e-11,53;CL:0000051,4.54e-11,53;CL:0000763,1.08e-10,108;CL:0000049,1.08e-10,108;CL:0000134,6.19e-08,354;CL:0002320,1.10e-07,361;CL:0000946,1.21e-07,1;CL:0000786,1.21e-07,1;CL:0000980,1.21e-07,1;CL:0002393,5.36e-07,9;CL:0002397,5.36e-07,9;CL:0000219,8.29e-07,386|ontology_enrichment_development_v019=CL:0002057;1.72e-18;42|ontology_enrichment_disease=DOID:0060058!2.91e-15!10|ontology_enrichment_disease_v019=DOID:630;4.71e-08;1!DOID:0050177;4.71e-08;1!DOID:0060060;4.71e-08;1!DOID:0060061;4.71e-08;1!DOID:0050427;4.71e-08;1!DOID:8691;4.71e-08;1!DOID:2355;6.86e-08;1|ontology_enrichment_disease_v019_2=DOID:630,5.05e-08,1;DOID:0050177,5.05e-08,1;DOID:0050427,5.05e-08,1;DOID:0060060,5.79e-08,1;DOID:0060061,5.79e-08,1;DOID:8691,5.79e-08,1;DOID:2355,6.19e-08,1|ontology_enrichment_uberon=UBERON:0002390!5.74e-16!102;UBERON:0003061!5.74e-16!102;UBERON:0002193!7.25e-15!112;UBERON:0002371!3.54e-12!80;UBERON:0001474!6.60e-11!86;UBERON:0002405!6.62e-10!115;UBERON:0004765!2.04e-08!101;UBERON:0001434!2.04e-08!101|ontology_enrichment_uberon_v019=UBERON:0002331;6.36e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.54e-16,98;UBERON:0003061,3.54e-16,98;UBERON:0002193,2.20e-14,108;UBERON:0002371,3.86e-14,76;UBERON:0001474,6.36e-13,82;UBERON:0004765,1.50e-11,90;UBERON:0002405,4.26e-11,93;UBERON:0001434,3.83e-10,100;UBERON:0002384,2.40e-07,371;UBERON:0002331,6.36e-07,10;UBERON:0000358,6.36e-07,10;UBERON:0000307,6.36e-07,10;UBERON:0000091,6.36e-07,10;UBERON:0000087,6.36e-07,10;UBERON:0007010,6.36e-07,10;UBERON:0007806,6.36e-07,10;UBERON:0008780,6.36e-07,10;UBERON:0005728,6.36e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4686365874693,10.0162719128934,8.7368967258184,0,0,0,0,0,0,0.0774672005803016,0.568676929949686,0,2.21598163412751,1.20326668482085,1.51907609501096,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,1.5369642391746,0.709446689665756,2.06847408441971,3.87290810150296,4.06279459783025,0,0,0,2.14258724659632,3.53021929783703,5.75403413219137,0,0,0,0.870627715885752,3.97169657283798,3.73693349397345,0,0,0,0.605399502633369,4.78760926783834,3.48108626184973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.197030760201927,0.215627574859517,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C763 | |||
|description=CAGE_peak_at_chrX:53743451..53743487,- | |||
|id=chrX:53743451..53743487,- | |||
|ontology_enrichment_celltype=CL:0002031!7.44e-29!124;CL:0002087!2.07e-27!119;CL:0000738!4.73e-27!140;CL:0000988!6.70e-23!182;CL:0002032!3.82e-21!165;CL:0000837!3.82e-21!165;CL:0000037!6.65e-21!172;CL:0000566!6.65e-21!172;CL:0002057!2.76e-18!42;CL:0000860!1.04e-16!45;CL:0000838!1.97e-16!52;CL:0000542!5.17e-16!53;CL:0000051!5.17e-16!53;CL:0000945!2.98e-13!24;CL:0000826!2.98e-13!24;CL:0000557!4.02e-13!71;CL:0002009!3.67e-12!65;CL:0000839!3.97e-12!70;CL:0000766!5.69e-12!76;CL:0002194!1.98e-11!63;CL:0000576!1.98e-11!63;CL:0000040!1.98e-11!63;CL:0000559!1.98e-11!63;CL:0000763!7.51e-08!112;CL:0000049!7.51e-08!112;CL:0000623!9.60e-08!3;CL:0000825!9.60e-08!3;CL:0000080!1.18e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.15e-20;33!CL:0002057;1.15e-20;33!CL:0000473;1.76e-14;39!CL:0000234;1.76e-14;39!CL:0002087;1.36e-13;104!CL:0000945;4.84e-13;24!CL:0000576;5.34e-13;48!CL:0000766;2.24e-11;69!CL:0002393;2.99e-10;6!CL:0002397;2.99e-10;6!CL:0000738;1.43e-08;136!CL:0000946;9.94e-08;1!CL:0000786;9.94e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,9.92e-29,115;CL:0000860,3.58e-28,42;CL:0002057,3.58e-28,42;CL:0002031,2.34e-27,120;CL:0000738,7.13e-26,136;CL:0000988,7.85e-25,177;CL:0000473,2.58e-24,48;CL:0000234,2.58e-24,48;CL:0002032,3.61e-21,161;CL:0000837,3.61e-21,161;CL:0000037,4.23e-20,168;CL:0002194,6.53e-19,59;CL:0000576,6.53e-19,59;CL:0000040,6.53e-19,59;CL:0000559,6.53e-19,59;CL:0002009,3.25e-18,61;CL:0000766,2.11e-17,72;CL:0000839,1.18e-16,66;CL:0000557,2.28e-16,67;CL:0000945,5.13e-13,24;CL:0000826,5.13e-13,24;CL:0000838,2.58e-11,52;CL:0000542,4.54e-11,53;CL:0000051,4.54e-11,53;CL:0000763,1.08e-10,108;CL:0000049,1.08e-10,108;CL:0000134,6.19e-08,354;CL:0002320,1.10e-07,361;CL:0000946,1.21e-07,1;CL:0000786,1.21e-07,1;CL:0000980,1.21e-07,1;CL:0002393,5.36e-07,9;CL:0002397,5.36e-07,9;CL:0000219,8.29e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.72e-18;42 | |||
|ontology_enrichment_disease=DOID:0060058!2.91e-15!10 | |||
|ontology_enrichment_disease_v019=DOID:630;4.71e-08;1!DOID:0050177;4.71e-08;1!DOID:0060060;4.71e-08;1!DOID:0060061;4.71e-08;1!DOID:0050427;4.71e-08;1!DOID:8691;4.71e-08;1!DOID:2355;6.86e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,5.05e-08,1;DOID:0050177,5.05e-08,1;DOID:0050427,5.05e-08,1;DOID:0060060,5.79e-08,1;DOID:0060061,5.79e-08,1;DOID:8691,5.79e-08,1;DOID:2355,6.19e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.74e-16!102;UBERON:0003061!5.74e-16!102;UBERON:0002193!7.25e-15!112;UBERON:0002371!3.54e-12!80;UBERON:0001474!6.60e-11!86;UBERON:0002405!6.62e-10!115;UBERON:0004765!2.04e-08!101;UBERON:0001434!2.04e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;6.36e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.54e-16,98;UBERON:0003061,3.54e-16,98;UBERON:0002193,2.20e-14,108;UBERON:0002371,3.86e-14,76;UBERON:0001474,6.36e-13,82;UBERON:0004765,1.50e-11,90;UBERON:0002405,4.26e-11,93;UBERON:0001434,3.83e-10,100;UBERON:0002384,2.40e-07,371;UBERON:0002331,6.36e-07,10;UBERON:0000358,6.36e-07,10;UBERON:0000307,6.36e-07,10;UBERON:0000091,6.36e-07,10;UBERON:0000087,6.36e-07,10;UBERON:0007010,6.36e-07,10;UBERON:0007806,6.36e-07,10;UBERON:0008780,6.36e-07,10;UBERON:0005728,6.36e-07,10 | |||
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|short_description=p@chrX:53743451..53743487,- | |||
}} |
Revision as of 12:14, 14 September 2013
Short description: | p@chrX:53743451..53743487, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:53743451..53743487, - |
Coexpression cluster: | C763_cord_B_splenic_xeroderma_b_hairy_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.54e-16 | 98 |
blood island | 3.54e-16 | 98 |
hemolymphoid system | 2.20e-14 | 108 |
bone marrow | 3.86e-14 | 76 |
bone element | 6.36e-13 | 82 |
skeletal element | 1.50e-11 | 90 |
immune system | 4.26e-11 | 93 |
skeletal system | 3.83e-10 | 100 |
connective tissue | 2.40e-07 | 371 |
umbilical cord | 6.36e-07 | 10 |
blastocyst | 6.36e-07 | 10 |
blastula | 6.36e-07 | 10 |
bilaminar disc | 6.36e-07 | 10 |
inner cell mass | 6.36e-07 | 10 |
cleaving embryo | 6.36e-07 | 10 |
connecting stalk | 6.36e-07 | 10 |
inner cell mass derived epiblast | 6.36e-07 | 10 |
extraembryonic mesoderm | 6.36e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 5.05e-08 | 1 |
monogenic disease | 5.05e-08 | 1 |
xeroderma pigmentosum | 5.05e-08 | 1 |
non-Hodgkin lymphoma | 5.79e-08 | 1 |
cutaneous T cell lymphoma | 5.79e-08 | 1 |
mycosis fungoides | 5.79e-08 | 1 |
anemia | 6.19e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.