FFCP PHASE1:Hg19::chrX:47479238..47479243,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6853|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11494|TSSclassifier=S|UniProt=P17600|association_with_transcript=8bp_to_ENST00000295987,ENST00000340666_5end|coexpression_cluster_id=C3|description=CAGE_peak_3_at_SYN1_5end|id=chrX:47479238..47479243,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;7.33e-12;82!UBERON:0006222;7.54e-10;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.77e-71!57;UBERON:0005068!2.77e-71!57;UBERON:0006241!2.77e-71!57;UBERON:0007135!2.77e-71!57;UBERON:0002616!3.71e-61!59;UBERON:0000955!9.94e-57!69;UBERON:0006238!9.94e-57!69;UBERON:0001017!6.80e-55!82;UBERON:0002780!3.71e-54!41;UBERON:0001890!3.71e-54!41;UBERON:0006240!3.71e-54!41;UBERON:0003080!1.03e-52!42;UBERON:0001893!1.32e-52!34;UBERON:0002020!2.03e-52!34;UBERON:0003528!2.03e-52!34;UBERON:0005743!6.63e-52!86;UBERON:0001869!7.02e-52!32;UBERON:0000073!5.12e-51!94;UBERON:0001016!5.12e-51!94;UBERON:0002791!1.00e-49!33;UBERON:0003075!1.79e-49!86;UBERON:0007284!1.79e-49!86;UBERON:0002619!3.47e-48!22;UBERON:0002346!7.86e-47!90;UBERON:0001950!3.35e-42!20;UBERON:0000956!5.30e-42!25;UBERON:0000203!5.30e-42!25;UBERON:0007023!2.71e-41!115;UBERON:0003056!9.52e-37!61;UBERON:0000033!1.76e-31!123;UBERON:0000153!1.47e-29!129;UBERON:0007811!1.47e-29!129;UBERON:0004121!2.51e-25!169;UBERON:0000924!1.69e-24!173;UBERON:0006601!1.69e-24!173;UBERON:0000200!5.53e-20!6;UBERON:0003076!8.45e-19!15;UBERON:0003057!8.45e-19!15;UBERON:0000349!1.26e-16!5;UBERON:0000025!3.33e-16!194;UBERON:0004733!1.88e-15!12;UBERON:0002028!1.88e-15!12;UBERON:0007277!1.88e-15!12;UBERON:0001871!1.83e-14!7;UBERON:0004732!3.72e-14!13;UBERON:0002298!1.70e-13!8;UBERON:0002420!4.86e-12!9;UBERON:0007245!4.86e-12!9;UBERON:0010009!4.86e-12!9;UBERON:0010011!4.86e-12!9;UBERON:0000454!4.86e-12!9;UBERON:0002308!7.99e-12!9;UBERON:0000125!7.99e-12!9;UBERON:0001872!2.53e-11!5;UBERON:0004111!3.82e-11!241;UBERON:0002021!9.27e-11!5;UBERON:0002771!1.08e-10!3;UBERON:0000988!4.91e-10!3;UBERON:0000477!5.63e-10!286;UBERON:0001896!6.70e-10!3;UBERON:0005290!6.70e-10!3;UBERON:0010096!6.70e-10!3;UBERON:0000064!8.93e-10!219;UBERON:0002680!1.43e-08!9;UBERON:0001895!1.43e-08!9;UBERON:0010092!1.43e-08!9;UBERON:0000483!7.17e-08!309;UBERON:0001870!7.62e-08!2;UBERON:0001954!8.14e-08!2;UBERON:0003022!8.14e-08!2;UBERON:0002421!8.14e-08!2;UBERON:0002600!8.14e-08!2;UBERON:0000369!8.59e-08!4;UBERON:0002435!8.59e-08!4;UBERON:0000204!8.59e-08!4;UBERON:0010082!8.59e-08!4;UBERON:0000119!1.05e-07!312;UBERON:0001876!2.15e-07!2;UBERON:0000475!2.50e-07!365;UBERON:0009663!2.84e-07!7;UBERON:0001905!3.78e-07!2;UBERON:0002757!3.78e-07!2;UBERON:0010134!3.78e-07!2;UBERON:0002784!3.78e-07!2;UBERON:0005408!3.78e-07!2;UBERON:0001899!3.78e-07!2;UBERON:0002148!4.70e-07!2;UBERON:0009662!4.70e-07!2|ontology_enrichment_uberon_v019=UBERON:0002619;1.63e-82;22!UBERON:0000956;9.98e-73;25!UBERON:0000203;9.98e-73;25!UBERON:0001950;7.12e-68;20!UBERON:0001869;8.99e-65;32!UBERON:0001893;1.22e-59;34!UBERON:0002791;2.24e-56;32!UBERON:0003528;6.47e-54;34!UBERON:0002020;6.47e-54;34!UBERON:0000200;3.73e-51;6!UBERON:0002780;2.07e-44;41!UBERON:0001890;2.07e-44;41!UBERON:0000073;2.21e-30;53!UBERON:0002616;2.21e-30;53!UBERON:0001872;1.97e-28;5!UBERON:0001870;1.73e-26;3!UBERON:0000955;5.45e-24;68!UBERON:0001017;6.99e-21;75!UBERON:0001954;2.03e-18;2!UBERON:0003022;2.03e-18;2!UBERON:0002421;2.03e-18;2!UBERON:0002600;2.03e-18;2!UBERON:0002771;5.82e-18;2!UBERON:0002702;5.82e-18;2!UBERON:0000349;2.59e-16;5!UBERON:0001016;7.05e-14;83!UBERON:0001871;1.05e-11;6!UBERON:0002022;1.72e-10;1!UBERON:0002581;2.59e-10;1!UBERON:0002902;2.59e-10;1!UBERON:0003112;2.59e-10;1!UBERON:0011158;2.59e-10;1!UBERON:0009899;2.59e-10;1!UBERON:0007190;2.59e-10;1!UBERON:0003128;2.59e-10;1!UBERON:0001703;2.59e-10;1!UBERON:0002241;2.59e-10;1!UBERON:0001882;4.06e-10;1!UBERON:0005403;4.06e-10;1!UBERON:0007023;6.38e-10;114!UBERON:0011216;9.82e-09;132!UBERON:0002021;5.12e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.64e-82,22;UBERON:0001869,2.10e-73,32;UBERON:0000956,1.00e-72,25;UBERON:0000203,1.00e-72,25;UBERON:0001893,4.63e-69,34;UBERON:0001950,6.41e-68,20;UBERON:0002791,8.05e-65,32;UBERON:0002780,4.54e-64,41;UBERON:0001890,4.54e-64,41;UBERON:0003080,4.54e-64,41;UBERON:0006240,4.54e-64,41;UBERON:0003528,5.66e-61,34;UBERON:0002020,5.66e-61,34;UBERON:0000073,6.01e-55,53;UBERON:0002616,6.01e-55,53;UBERON:0001049,6.64e-52,56;UBERON:0005068,6.64e-52,56;UBERON:0006241,6.64e-52,56;UBERON:0007135,6.64e-52,56;UBERON:0000955,1.98e-51,68;UBERON:0006238,1.98e-51,68;UBERON:0000200,3.43e-51,6;UBERON:0001017,2.70e-47,81;UBERON:0003056,1.67e-42,61;UBERON:0001016,2.28e-42,89;UBERON:0003075,9.92e-35,82;UBERON:0007284,9.92e-35,82;UBERON:0007023,1.13e-33,114;UBERON:0002346,5.37e-33,86;UBERON:0001872,2.05e-28,5;UBERON:0010371,7.95e-27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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6853 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11494 | |||
|TSSclassifier=S | |||
|UniProt=P17600 | |||
|association_with_transcript=8bp_to_ENST00000295987,ENST00000340666_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_SYN1_5end | |||
|id=chrX:47479238..47479243,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.33e-12;82!UBERON:0006222;7.54e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p3@SYN1 | |||
}} |
Revision as of 12:03, 14 September 2013
Short description: | p3@SYN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SYN1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 8bp_to_ENST00000295987, ENST00000340666_5end |
EntrezGene: | SYN1 |
HGNC: | 11494 |
UniProt: | P17600 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.