FFCP PHASE1:Hg19::chrX:4459300..4459310,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C322|description=CAGE_peak_at_chrX:4459300..4459310,-|id=chrX:4459300..4459310,-|ontology_enrichment_celltype=CL:0002150!4.84e-22!3;CL:0000861!4.84e-22!3;CL:0000066!6.54e-08!254;CL:0000235!5.46e-07!10|ontology_enrichment_celltype_v019=CL:0002178;1.41e-09;3|ontology_enrichment_celltype_v019_2=CL:0002178,1.54e-09,3|ontology_enrichment_development_v019=UBERON:0007123;6.64e-21;5|ontology_enrichment_disease=DOID:0050687!4.77e-17!143;DOID:3493!6.78e-16!2;DOID:305!8.94e-15!106;DOID:162!1.39e-12!235;DOID:14566!3.08e-12!239;DOID:6193!3.58e-09!1;DOID:3112!4.89e-09!1|ontology_enrichment_disease_v019=DOID:3112;5.92e-26;1!DOID:6193;5.92e-26;1!DOID:3350;1.07e-13;2!DOID:3493;1.07e-13;2!DOID:299;1.35e-09;25!DOID:3119;4.82e-08;14|ontology_enrichment_disease_v019_2=DOID:6193,3.58e-26,1;DOID:3112,9.79e-26,1;DOID:3350,8.28e-14,2;DOID:3493,1.21e-13,2;DOID:299,1.44e-09,25;DOID:3119,4.49e-08,14|ontology_enrichment_uberon=UBERON:0001737!2.36e-13!9;UBERON:0007195!5.28e-09!1;UBERON:0001282!1.91e-08!1;UBERON:0009842!1.91e-08!1;UBERON:0003704!1.91e-08!1;UBERON:0001171!1.91e-08!1;UBERON:0001172!1.91e-08!1;UBERON:0002394!2.68e-08!4;UBERON:0003928!2.68e-08!4;UBERON:0002046!3.89e-07!5;UBERON:0004117!3.89e-07!5;UBERON:0007689!3.89e-07!5;UBERON:0007123!3.89e-07!5;UBERON:0003091!3.89e-07!5|ontology_enrichment_uberon_v019=UBERON:0007195;5.92e-26;1!UBERON:0002046;6.64e-21;5!UBERON:0001052;1.69e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.26e-25,1;UBERON:0002046,8.13e-21,5;UBERON:0004117,8.13e-21,5;UBERON:0007689,8.13e-21,5;UBERON:0007123,8.13e-21,5;UBERON:0003091,8.13e-21,5;UBERON:0009722,5.06e-10,11;UBERON:0007690,5.06e-10,11;UBERON:0001052,1.40e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.330881918197182,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988551862620595,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.832048038078832,0,0,0,0,1.89184635718778,0.0967563312890851,0.0730893170861856,0.246346371159628,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31017534008077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333694205676207,0,0,1.96190514319652,0,0,0,0,0,1.3948971044175,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3741032706134,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.40988969354601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chrX:4459300..4459310,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C322 | |||
|description=CAGE_peak_at_chrX:4459300..4459310,- | |||
|id=chrX:4459300..4459310,- | |||
|ontology_enrichment_celltype=CL:0002150!4.84e-22!3;CL:0000861!4.84e-22!3;CL:0000066!6.54e-08!254;CL:0000235!5.46e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.41e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.54e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;6.64e-21;5 | |||
|ontology_enrichment_disease=DOID:0050687!4.77e-17!143;DOID:3493!6.78e-16!2;DOID:305!8.94e-15!106;DOID:162!1.39e-12!235;DOID:14566!3.08e-12!239;DOID:6193!3.58e-09!1;DOID:3112!4.89e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:3112;5.92e-26;1!DOID:6193;5.92e-26;1!DOID:3350;1.07e-13;2!DOID:3493;1.07e-13;2!DOID:299;1.35e-09;25!DOID:3119;4.82e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,3.58e-26,1;DOID:3112,9.79e-26,1;DOID:3350,8.28e-14,2;DOID:3493,1.21e-13,2;DOID:299,1.44e-09,25;DOID:3119,4.49e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.36e-13!9;UBERON:0007195!5.28e-09!1;UBERON:0001282!1.91e-08!1;UBERON:0009842!1.91e-08!1;UBERON:0003704!1.91e-08!1;UBERON:0001171!1.91e-08!1;UBERON:0001172!1.91e-08!1;UBERON:0002394!2.68e-08!4;UBERON:0003928!2.68e-08!4;UBERON:0002046!3.89e-07!5;UBERON:0004117!3.89e-07!5;UBERON:0007689!3.89e-07!5;UBERON:0007123!3.89e-07!5;UBERON:0003091!3.89e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;5.92e-26;1!UBERON:0002046;6.64e-21;5!UBERON:0001052;1.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.26e-25,1;UBERON:0002046,8.13e-21,5;UBERON:0004117,8.13e-21,5;UBERON:0007689,8.13e-21,5;UBERON:0007123,8.13e-21,5;UBERON:0003091,8.13e-21,5;UBERON:0009722,5.06e-10,11;UBERON:0007690,5.06e-10,11;UBERON:0001052,1.40e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.330881918197182,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988551862620595,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.832048038078832,0,0,0,0,1.89184635718778,0.0967563312890851,0.0730893170861856,0.246346371159628,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31017534008077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333694205676207,0,0,1.96190514319652,0,0,0,0,0,1.3948971044175,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3741032706134,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.40988969354601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:4459300..4459310,- | |||
}} |
Revision as of 11:55, 14 September 2013
Short description: | p@chrX:4459300..4459310, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:4459300..4459310, - |
Coexpression cluster: | C322_thyroid_anaplastic_gastric_testis_papillary_fibrous_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.26e-25 | 1 |
thyroid gland | 8.13e-21 | 5 |
pharyngeal pouch | 8.13e-21 | 5 |
thyroid diverticulum | 8.13e-21 | 5 |
pharyngeal pouch 2 | 8.13e-21 | 5 |
thyroid primordium | 8.13e-21 | 5 |
entire pharyngeal arch endoderm | 5.06e-10 | 11 |
early pharyngeal endoderm | 5.06e-10 | 11 |
rectum | 1.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 3.58e-26 | 1 |
papillary adenocarcinoma | 9.79e-26 | 1 |
mesenchymal cell neoplasm | 8.28e-14 | 2 |
signet ring cell adenocarcinoma | 1.21e-13 | 2 |
adenocarcinoma | 1.44e-09 | 25 |
gastrointestinal system cancer | 4.49e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.