FFCP PHASE1:Hg19::chrX:41449223..41449229,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8573|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1497|TSSclassifier=S|UniProt=|association_with_transcript=-19bp_to_ENST00000378179,uc004dfj.3_5end|coexpression_cluster_id=C276|description=CAGE_peak_20_at_CASK_5end|id=chrX:41449223..41449229,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002569;1.50e-09;6|ontology_enrichment_celltype_v019_2=CL:0002569,1.44e-09,6|ontology_enrichment_development_v019=UBERON:0000358;2.42e-50;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1115;5.56e-11;20|ontology_enrichment_disease_v019_2=DOID:1115,5.70e-11,20|ontology_enrichment_uberon=UBERON:0002426!1.45e-11!1;UBERON:0003831!1.45e-11!1;UBERON:0003898!1.45e-11!1;UBERON:0004830!1.45e-11!1;UBERON:0001774!1.45e-11!1;UBERON:0003830!1.45e-11!1;UBERON:0005175!1.45e-11!1;UBERON:0003897!1.45e-11!1;UBERON:0001103!1.45e-11!1;UBERON:0010084!1.45e-11!1;UBERON:0003112!2.68e-11!1;UBERON:0000032!2.68e-11!1;UBERON:0005253!2.68e-11!1;UBERON:0003128!2.68e-11!1;UBERON:0002241!2.68e-11!1;UBERON:0001703!2.68e-11!1;UBERON:0004761!2.68e-11!1;UBERON:0009617!2.68e-11!1;UBERON:0002363!5.43e-11!1;UBERON:0007647!5.43e-11!1;UBERON:0010115!5.43e-11!1|ontology_enrichment_uberon_v019=UBERON:0002331;8.98e-21;10!UBERON:0003422;1.50e-09;6!UBERON:0000478;2.61e-09;24!UBERON:0003104;2.26e-08;7!UBERON:0009142;2.26e-08;7|ontology_enrichment_uberon_v019_2=UBERON:0002331,8.54e-21,10;UBERON:0000358,8.54e-21,10;UBERON:0000307,8.54e-21,10;UBERON:0000091,8.54e-21,10;UBERON:0000087,8.54e-21,10;UBERON:0007010,8.54e-21,10;UBERON:0007806,8.54e-21,10;UBERON:0008780,8.54e-21,10;UBERON:0005728,8.54e-21,10;UBERON:0003422,1.44e-09,6;UBERON:0000478,2.56e-09,24|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86686278029118,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09986429740715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04314963381548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0|short_description=p20@CASK}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8573 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1497 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-19bp_to_ENST00000378179,uc004dfj.3_5end | |||
|coexpression_cluster_id=C276 | |||
|description=CAGE_peak_20_at_CASK_5end | |||
|id=chrX:41449223..41449229,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002569;1.50e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002569,1.44e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.42e-50;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1115;5.56e-11;20 | |||
|ontology_enrichment_disease_v019_2=DOID:1115,5.70e-11,20 | |||
|ontology_enrichment_uberon=UBERON:0002426!1.45e-11!1;UBERON:0003831!1.45e-11!1;UBERON:0003898!1.45e-11!1;UBERON:0004830!1.45e-11!1;UBERON:0001774!1.45e-11!1;UBERON:0003830!1.45e-11!1;UBERON:0005175!1.45e-11!1;UBERON:0003897!1.45e-11!1;UBERON:0001103!1.45e-11!1;UBERON:0010084!1.45e-11!1;UBERON:0003112!2.68e-11!1;UBERON:0000032!2.68e-11!1;UBERON:0005253!2.68e-11!1;UBERON:0003128!2.68e-11!1;UBERON:0002241!2.68e-11!1;UBERON:0001703!2.68e-11!1;UBERON:0004761!2.68e-11!1;UBERON:0009617!2.68e-11!1;UBERON:0002363!5.43e-11!1;UBERON:0007647!5.43e-11!1;UBERON:0010115!5.43e-11!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;8.98e-21;10!UBERON:0003422;1.50e-09;6!UBERON:0000478;2.61e-09;24!UBERON:0003104;2.26e-08;7!UBERON:0009142;2.26e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,8.54e-21,10;UBERON:0000358,8.54e-21,10;UBERON:0000307,8.54e-21,10;UBERON:0000091,8.54e-21,10;UBERON:0000087,8.54e-21,10;UBERON:0007010,8.54e-21,10;UBERON:0007806,8.54e-21,10;UBERON:0008780,8.54e-21,10;UBERON:0005728,8.54e-21,10;UBERON:0003422,1.44e-09,6;UBERON:0000478,2.56e-09,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86686278029118,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09986429740715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04314963381548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p20@CASK | |||
}} |
Revision as of 11:53, 14 September 2013
Short description: | p20@CASK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_CASK_5end |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | -19bp_to_ENST00000378179, uc004dfj.3_5end |
EntrezGene: | CASK |
HGNC: | 1497 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 1.44e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 8.54e-21 | 10 |
blastocyst | 8.54e-21 | 10 |
blastula | 8.54e-21 | 10 |
bilaminar disc | 8.54e-21 | 10 |
inner cell mass | 8.54e-21 | 10 |
cleaving embryo | 8.54e-21 | 10 |
connecting stalk | 8.54e-21 | 10 |
inner cell mass derived epiblast | 8.54e-21 | 10 |
extraembryonic mesoderm | 8.54e-21 | 10 |
mesenchyme of umbilical cord | 1.44e-09 | 6 |
extraembryonic structure | 2.56e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
sarcoma | 5.70e-11 | 20 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.