FFCP PHASE1:Mm9::chr7:134093373..134093403,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=233879|HGNC=|MCL_coexpression_id=1|UniProt=Q2TA57|association_with_transcript=-277bp_to_ENSMUST00000052937_5end|description=CAGE_peak_2_at_Asphd1_5end|id=chr7:134093373..134093403,-|ontology_enrichment_celltype=CL:0000117!5.70e-15!23;CL:0000337!5.70e-15!23;CL:0000540!9.94e-12!33;CL:0000047!9.94e-12!33;CL:0000031!9.94e-12!33;CL:0000404!9.94e-12!33;CL:0002319!1.02e-08!43;CL:0000393!1.49e-08!39;CL:0000211!1.49e-08!39;CL:0000221!2.59e-08!44;CL:0000133!2.59e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.43e-14,23;CL:0000337,1.43e-14,23;CL:0000540,3.71e-09,33;CL:0000047,3.71e-09,33;CL:0000031,3.71e-09,33;CL:0000404,3.71e-09,33;CL:0002610,1.54e-07,3;CL:0002614,1.87e-07,3;CL:0000393,2.89e-07,39;CL:0000211,2.89e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.79e-31!71;UBERON:0003075!3.79e-31!71;UBERON:0007284!3.79e-31!71;UBERON:0000073!1.26e-30!75;UBERON:0001016!1.26e-30!75;UBERON:0001049!1.45e-30!52;UBERON:0005068!1.45e-30!52;UBERON:0006241!1.45e-30!52;UBERON:0007135!1.45e-30!52;UBERON:0001017!3.07e-30!73;UBERON:0005743!3.07e-30!73;UBERON:0000955!9.62e-30!50;UBERON:0006238!9.62e-30!50;UBERON:0000033!9.80e-30!63;UBERON:0002616!1.10e-28!49;UBERON:0004121!4.53e-27!102;UBERON:0000924!4.53e-27!102;UBERON:0006601!4.53e-27!102;UBERON:0003056!1.24e-25!49;UBERON:0003080!2.13e-22!40;UBERON:0002780!1.91e-21!39;UBERON:0001890!1.91e-21!39;UBERON:0006240!1.91e-21!39;UBERON:0002020!2.55e-18!34;UBERON:0007811!2.40e-16!86;UBERON:0002791!9.13e-15!29;UBERON:0003528!9.13e-15!29;UBERON:0001893!9.13e-15!29;UBERON:0000153!2.36e-13!94;UBERON:0000956!8.50e-09!21;UBERON:0001869!8.50e-09!21;UBERON:0000203!8.50e-09!21;UBERON:0003076!1.69e-08!12;UBERON:0003057!1.69e-08!12;UBERON:0002420!1.01e-07!8;UBERON:0007245!1.01e-07!8;UBERON:0010009!1.01e-07!8;UBERON:0010011!1.01e-07!8;UBERON:0000454!1.01e-07!8;UBERON:0001894!1.05e-07!10;UBERON:0006222!1.05e-07!10;UBERON:0002021!2.57e-07!10;UBERON:0000411!2.57e-07!10;UBERON:0001950!2.57e-07!10;UBERON:0002298!4.56e-07!6;UBERON:0002619!5.15e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.16e-43,54;UBERON:0001049,2.26e-39,52;UBERON:0005068,2.26e-39,52;UBERON:0006241,2.26e-39,52;UBERON:0007135,2.26e-39,52;UBERON:0001017,2.07e-36,73;UBERON:0001016,3.32e-35,75;UBERON:0002346,2.17e-34,64;UBERON:0003075,2.17e-34,64;UBERON:0007284,2.17e-34,64;UBERON:0000955,3.57e-34,47;UBERON:0006238,3.57e-34,47;UBERON:0002616,3.04e-32,46;UBERON:0010371,4.10e-29,73;UBERON:0004121,4.75e-29,95;UBERON:0000924,4.75e-29,95;UBERON:0006601,4.75e-29,95;UBERON:0003080,1.59e-26,40;UBERON:0002780,8.89e-25,39;UBERON:0001890,8.89e-25,39;UBERON:0006240,8.89e-25,39;UBERON:0003056,4.44e-24,49;UBERON:0002020,1.08e-23,34;UBERON:0010314,2.32e-21,92;UBERON:0003528,9.22e-19,29;UBERON:0002791,9.22e-19,29;UBERON:0001893,9.22e-19,29;UBERON:0002021,6.77e-15,10;UBERON:0000411,6.77e-15,10;UBERON:0001950,6.77e-15,10;UBERON:0000025,1.58e-13,114;UBERON:0003076,5.26e-13,12;UBERON:0003057,5.26e-13,12;UBERON:0004111,4.11e-12,122;UBERON:0002420,4.40e-12,8;UBERON:0007245,4.40e-12,8;UBERON:0010009,4.40e-12,8;UBERON:0010011,4.40e-12,8;UBERON:0000454,4.40e-12,8;UBERON:0002619,5.99e-10,17;UBERON:0002950,1.78e-09,4;UBERON:0001891,1.78e-09,4;UBERON:0009616,1.78e-09,4;UBERON:0010286,1.78e-09,4;UBERON:0000956,1.80e-09,21;UBERON:0001869,1.80e-09,21;UBERON:0000203,1.80e-09,21;UBERON:0011216,3.79e-08,194;UBERON:0002240,6.32e-08,6;UBERON:0005174,6.32e-08,6;UBERON:0001137,6.32e-08,6;UBERON:0004684,1.54e-07,3;UBERON:0002275,1.54e-07,3;UBERON:0002038,1.87e-07,3;UBERON:0009663,1.87e-07,3;UBERON:0009661,1.87e-07,3;UBERON:0000125,1.87e-07,3;UBERON:0002308,1.87e-07,3;UBERON:0000483,2.39e-07,174;UBERON:0000119,3.59e-07,176;UBERON:0001894,7.00e-07,10;UBERON:0006222,7.00e-07,10|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.404632921719196,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0.630974884054146,2.28520787523043,0.662605622854841,0.857435594504678,0.479227355091182,0,4.40463523997555,5.10749352340751,4.45458946443106,1.31886287730194,2.10421580285542,2.6045668527838,4.4669279840221,7.31591393041184,3.0559649555362,2.06240009831567,1.56608848879013,2.05039390407831,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0,0,0.150722640552623,0.823120949949934,0,0,0,0,0,0,0,0,7.02673912827713,6.28340120440365,0,0,0,0,5.09288173976397,4.11750542536764,0.753926112677186,4.17178368461463,4.34716277461562,5.194701113989,4.38051410282946,0,0,0,0.210441855886474,0,0.229902104433473,0.900310649026746,0.30140963567143,0.476255494059295,1.0249097622788,0.468508622798644,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,2.10289948564127,0.411618449517138,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49541651965817,8.67366480782304,0,0,0,0,0.430846795465598,0,0,0.283076530788832,0,0.292255857911312,0.395287777946524,7.06906896127976,0,0.178065603667255,0,0,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0,1.06949213515416,0.316036757935816,0,0,4.08527526904546,0.18006109403131,0.646793418913773,0.428674070063185,0.532020700926821,1.07021290561242,1.81003922662333,2.74018454203139,0,0,0,0,0,0,0,0,0,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.418176592028937,0,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,1.38097570952153,1.71868654031819,1.54667864109319,4.11049511862385,3.7769694869485,0,3.60256962579376,1.81256963593682,5.1776031175182,0,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0.888986911206461,0.206035057238894,0.64183841918363,0.252697211763798,0.25347929989024,0,0.187283014939765,0.320125762024346,0.459483751644906,0.952587382566147,0.115884325944855,0.38581844092741,1.23625770240992,0.441596760403192,0.342869252385415,0.177475806159338,0.476872379894642,0,0.282328141245992,0.25384382367503,0.914639864363863,0.789209134313529,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0,0.578719832943424,0,0.233931608445408,0.859484216193193,0,0.220591419119515,0.695603506861264|short_description=p2@Asphd1}} | ||
|EntrezGene=233879 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q2TA57 | |||
|association_with_transcript=-277bp_to_ENSMUST00000052937_5end | |||
|description=CAGE_peak_2_at_Asphd1_5end | |||
|id=chr7:134093373..134093403,- | |||
|ontology_enrichment_celltype=CL:0000117!5.70e-15!23;CL:0000337!5.70e-15!23;CL:0000540!9.94e-12!33;CL:0000047!9.94e-12!33;CL:0000031!9.94e-12!33;CL:0000404!9.94e-12!33;CL:0002319!1.02e-08!43;CL:0000393!1.49e-08!39;CL:0000211!1.49e-08!39;CL:0000221!2.59e-08!44;CL:0000133!2.59e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.43e-14,23;CL:0000337,1.43e-14,23;CL:0000540,3.71e-09,33;CL:0000047,3.71e-09,33;CL:0000031,3.71e-09,33;CL:0000404,3.71e-09,33;CL:0002610,1.54e-07,3;CL:0002614,1.87e-07,3;CL:0000393,2.89e-07,39;CL:0000211,2.89e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.79e-31!71;UBERON:0003075!3.79e-31!71;UBERON:0007284!3.79e-31!71;UBERON:0000073!1.26e-30!75;UBERON:0001016!1.26e-30!75;UBERON:0001049!1.45e-30!52;UBERON:0005068!1.45e-30!52;UBERON:0006241!1.45e-30!52;UBERON:0007135!1.45e-30!52;UBERON:0001017!3.07e-30!73;UBERON:0005743!3.07e-30!73;UBERON:0000955!9.62e-30!50;UBERON:0006238!9.62e-30!50;UBERON:0000033!9.80e-30!63;UBERON:0002616!1.10e-28!49;UBERON:0004121!4.53e-27!102;UBERON:0000924!4.53e-27!102;UBERON:0006601!4.53e-27!102;UBERON:0003056!1.24e-25!49;UBERON:0003080!2.13e-22!40;UBERON:0002780!1.91e-21!39;UBERON:0001890!1.91e-21!39;UBERON:0006240!1.91e-21!39;UBERON:0002020!2.55e-18!34;UBERON:0007811!2.40e-16!86;UBERON:0002791!9.13e-15!29;UBERON:0003528!9.13e-15!29;UBERON:0001893!9.13e-15!29;UBERON:0000153!2.36e-13!94;UBERON:0000956!8.50e-09!21;UBERON:0001869!8.50e-09!21;UBERON:0000203!8.50e-09!21;UBERON:0003076!1.69e-08!12;UBERON:0003057!1.69e-08!12;UBERON:0002420!1.01e-07!8;UBERON:0007245!1.01e-07!8;UBERON:0010009!1.01e-07!8;UBERON:0010011!1.01e-07!8;UBERON:0000454!1.01e-07!8;UBERON:0001894!1.05e-07!10;UBERON:0006222!1.05e-07!10;UBERON:0002021!2.57e-07!10;UBERON:0000411!2.57e-07!10;UBERON:0001950!2.57e-07!10;UBERON:0002298!4.56e-07!6;UBERON:0002619!5.15e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.16e-43,54;UBERON:0001049,2.26e-39,52;UBERON:0005068,2.26e-39,52;UBERON:0006241,2.26e-39,52;UBERON:0007135,2.26e-39,52;UBERON:0001017,2.07e-36,73;UBERON:0001016,3.32e-35,75;UBERON:0002346,2.17e-34,64;UBERON:0003075,2.17e-34,64;UBERON:0007284,2.17e-34,64;UBERON:0000955,3.57e-34,47;UBERON:0006238,3.57e-34,47;UBERON:0002616,3.04e-32,46;UBERON:0010371,4.10e-29,73;UBERON:0004121,4.75e-29,95;UBERON:0000924,4.75e-29,95;UBERON:0006601,4.75e-29,95;UBERON:0003080,1.59e-26,40;UBERON:0002780,8.89e-25,39;UBERON:0001890,8.89e-25,39;UBERON:0006240,8.89e-25,39;UBERON:0003056,4.44e-24,49;UBERON:0002020,1.08e-23,34;UBERON:0010314,2.32e-21,92;UBERON:0003528,9.22e-19,29;UBERON:0002791,9.22e-19,29;UBERON:0001893,9.22e-19,29;UBERON:0002021,6.77e-15,10;UBERON:0000411,6.77e-15,10;UBERON:0001950,6.77e-15,10;UBERON:0000025,1.58e-13,114;UBERON:0003076,5.26e-13,12;UBERON:0003057,5.26e-13,12;UBERON:0004111,4.11e-12,122;UBERON:0002420,4.40e-12,8;UBERON:0007245,4.40e-12,8;UBERON:0010009,4.40e-12,8;UBERON:0010011,4.40e-12,8;UBERON:0000454,4.40e-12,8;UBERON:0002619,5.99e-10,17;UBERON:0002950,1.78e-09,4;UBERON:0001891,1.78e-09,4;UBERON:0009616,1.78e-09,4;UBERON:0010286,1.78e-09,4;UBERON:0000956,1.80e-09,21;UBERON:0001869,1.80e-09,21;UBERON:0000203,1.80e-09,21;UBERON:0011216,3.79e-08,194;UBERON:0002240,6.32e-08,6;UBERON:0005174,6.32e-08,6;UBERON:0001137,6.32e-08,6;UBERON:0004684,1.54e-07,3;UBERON:0002275,1.54e-07,3;UBERON:0002038,1.87e-07,3;UBERON:0009663,1.87e-07,3;UBERON:0009661,1.87e-07,3;UBERON:0000125,1.87e-07,3;UBERON:0002308,1.87e-07,3;UBERON:0000483,2.39e-07,174;UBERON:0000119,3.59e-07,176;UBERON:0001894,7.00e-07,10;UBERON:0006222,7.00e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.404632921719196,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0.630974884054146,2.28520787523043,0.662605622854841,0.857435594504678,0.479227355091182,0,4.40463523997555,5.10749352340751,4.45458946443106,1.31886287730194,2.10421580285542,2.6045668527838,4.4669279840221,7.31591393041184,3.0559649555362,2.06240009831567,1.56608848879013,2.05039390407831,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0,0,0.150722640552623,0.823120949949934,0,0,0,0,0,0,0,0,7.02673912827713,6.28340120440365,0,0,0,0,5.09288173976397,4.11750542536764,0.753926112677186,4.17178368461463,4.34716277461562,5.194701113989,4.38051410282946,0,0,0,0.210441855886474,0,0.229902104433473,0.900310649026746,0.30140963567143,0.476255494059295,1.0249097622788,0.468508622798644,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,2.10289948564127,0.411618449517138,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49541651965817,8.67366480782304,0,0,0,0,0.430846795465598,0,0,0.283076530788832,0,0.292255857911312,0.395287777946524,7.06906896127976,0,0.178065603667255,0,0,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0,1.06949213515416,0.316036757935816,0,0,4.08527526904546,0.18006109403131,0.646793418913773,0.428674070063185,0.532020700926821,1.07021290561242,1.81003922662333,2.74018454203139,0,0,0,0,0,0,0,0,0,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.418176592028937,0,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,1.38097570952153,1.71868654031819,1.54667864109319,4.11049511862385,3.7769694869485,0,3.60256962579376,1.81256963593682,5.1776031175182,0,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0.888986911206461,0.206035057238894,0.64183841918363,0.252697211763798,0.25347929989024,0,0.187283014939765,0.320125762024346,0.459483751644906,0.952587382566147,0.115884325944855,0.38581844092741,1.23625770240992,0.441596760403192,0.342869252385415,0.177475806159338,0.476872379894642,0,0.282328141245992,0.25384382367503,0.914639864363863,0.789209134313529,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0,0.578719832943424,0,0.233931608445408,0.859484216193193,0,0.220591419119515,0.695603506861264 | |||
|short_description=p2@Asphd1 | |||
}} |
Revision as of 11:51, 14 September 2013
Short description: | p2@Asphd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Asphd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -277bp_to_ENSMUST00000052937_5end |
EntrezGene: | Asphd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.43e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.43e-14 | 23 |
neuron | 3.71e-09 | 33 |
neuronal stem cell | 3.71e-09 | 33 |
neuroblast | 3.71e-09 | 33 |
electrically signaling cell | 3.71e-09 | 33 |
raphe nuclei neuron | 1.54e-07 | 3 |
neuron of the substantia nigra | 1.87e-07 | 3 |
electrically responsive cell | 2.89e-07 | 39 |
electrically active cell | 2.89e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.