FFCP PHASE1:Hg19::chrX:24167828..24167890,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7543|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12869|TSSclassifier=S|UniProt=P17010,C9JGU9,F5GYV7,F5H6Z8,Q59EB9,Q8WXB7|association_with_transcript=0bp_to_ENST00000379177,ENST00000379188,ENST00000419690,ENST00000535562,ENST00000536464,NM_001178084,NM_001178085,NM_003410_5end|description=CAGE_peak_1_at_ZFX_5end|id=chrX:24167828..24167890,+|ontology_enrichment_celltype=CL:0000738!3.80e-27!140;CL:0000766!2.07e-23!76;CL:0002031!1.03e-20!124;CL:0000557!4.36e-20!71;CL:0000037!1.30e-19!172;CL:0000566!1.30e-19!172;CL:0002087!3.33e-19!119;CL:0000839!4.44e-19!70;CL:0000860!5.05e-19!45;CL:0002057!1.43e-18!42;CL:0002009!1.88e-18!65;CL:0002032!4.48e-18!165;CL:0000837!4.48e-18!165;CL:0002194!1.03e-17!63;CL:0000576!1.03e-17!63;CL:0000040!1.03e-17!63;CL:0000559!1.03e-17!63;CL:0000988!2.49e-16!182;CL:0000763!1.63e-15!112;CL:0000049!1.63e-15!112;CL:0000134!8.72e-09!358;CL:0002320!8.72e-08!365|ontology_enrichment_celltype_v019=CL:0000860;5.89e-16;33!CL:0002057;5.89e-16;33!CL:0000473;1.26e-12;39!CL:0000234;1.26e-12;39!CL:0000576;1.54e-11;48!CL:0000766;1.01e-09;69!CL:0002087;7.72e-07;104|ontology_enrichment_celltype_v019_2=CL:0000738,3.36e-26,136;CL:0000766,1.37e-22,72;CL:0002031,7.92e-20,120;CL:0000557,2.87e-19,67;CL:0000037,9.69e-19,168;CL:0000860,1.43e-18,42;CL:0002057,1.43e-18,42;CL:0002087,2.46e-18,115;CL:0000839,2.93e-18,66;CL:0002009,1.20e-17,61;CL:0000473,2.22e-17,48;CL:0000234,2.22e-17,48;CL:0002032,3.15e-17,161;CL:0000837,3.15e-17,161;CL:0002194,6.57e-17,59;CL:0000576,6.57e-17,59;CL:0000040,6.57e-17,59;CL:0000559,6.57e-17,59;CL:0000988,6.08e-16,177;CL:0000763,1.09e-14,108;CL:0000049,1.09e-14,108;CL:0000134,1.39e-08,354;CL:0002320,1.36e-07,361|ontology_enrichment_development_v019=CL:0002057;1.09e-13;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.58e-17!102;UBERON:0003061!7.58e-17!102;UBERON:0001474!1.48e-16!86;UBERON:0004765!1.05e-15!101;UBERON:0001434!1.05e-15!101;UBERON:0002371!1.84e-15!80;UBERON:0002193!1.54e-14!112;UBERON:0002405!1.24e-10!115;UBERON:0002384!1.81e-08!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.27e-16,98;UBERON:0003061,5.27e-16,98;UBERON:0001474,1.01e-15,82;UBERON:0004765,7.61e-15,90;UBERON:0002371,1.23e-14,76;UBERON:0001434,7.50e-14,100;UBERON:0002193,1.00e-13,108;UBERON:0002405,1.22e-12,93;UBERON:0002384,2.88e-08,371|phase1_expression=17.4411244099734,15.2011371962598,20.5793429980118,10.007329835313,4.02264984984559,4.36169262050184,0,9.47579810140246,11.2309820125931,3.19454117451962,2.09340350391728,4.36882744260345,3.16520373874144,10.0250745897638,5.63375538737457,3.36162573225888,4.21886169616784,5.84248072309899,2.92759679274304,2.58554221961255,4.08001382488506,1.88072832886853,10.5907315238491,10.676205155685,7.15593045690376,12.9902789771517,11.9866860596921,11.4917740717972,12.5876568591649,24.5650814782216,17.3394058114005,4.59710612239464,7.53014796945625,3.69754010166788,5.88750724410292,6.11327699695913,10.2760153767197,16.0658668474244,15.6424669026711,14.5397283379621,10.5240272892764,28.1787489436512,10.5605982730016,26.8986741742195,17.0044174659964,23.5306539352182,20.9186133215116,16.446715520873,30.041517976825,23.015391385772,16.3942852178624,30.5062076556275,29.6481285433492,17.4280864567633,41.9822108442459,27.8598662523055,16.9201813035864,29.214052977861,20.5076207888505,15.7255223267286,44.7535988059329,30.6761709173646,20.7442203926497,34.5242047931482,31.0523885332585,16.4541715160431,43.5975574296902,25.1248665256743,17.2089363078666,39.093992046921,27.848377121135,15.0993830754902,44.9376590166056,12.0415513197807,14.2444880976579,12.3698600849942,12.9177925818469,15.7685737483582,11.8936934155839,9.69043328720245,14.5209174355336,12.0558341484658,31.6793240030381,16.3841583378639,19.5692035849982,14.0820973446947,12.0118796110804,22.4153451582248,15.8650769468367,17.1729675816366,19.3532409497212,28.774622279176,15.6732023531344,17.1822727152734,7.28661131875997,9.2184429671277,12.5894252872853,7.8602152549833,23.027367887945,9.86400322805001,8.79990119910694,15.1503297835115,5.84480185223734,10.3611724903211,10.3112067616193,11.9628303075155,10.8321545506006,10.247305578054,8.84403563407172,10.6884637992389,12.1594007825773,9.56350182925673,15.8666622583405,13.1095005763959,13.589618094647,12.010790325942,8.04763036564035,10.6524508099615,13.9160830610727,18.1582286164735,11.7195021694155,19.0090408889675,7.52875595388864,6.39933055772092,12.4930726552346,23.6777252044017,19.7070719261051,10.6851573909108,11.4999284186908,8.11016661743674,7.31420598941885,6.03630773733273,9.97327982379537,4.69870898099936,5.51471701699479,5.21447468258965,7.15757352345989,4.37971383272372,11.6277825111803,3.99112915432615,9.39832206916449,3.99486180268024,0.364295288292542,1.85392221392215,19.1482962256263,21.5920874251091,7.57860374957531,25.9954780492823,14.29987276950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4419753279,6.44336865332882,13.408869866368,3.61377364172861,6.94040279850412,13.9661229493311,15.2642088313641,8.1227597351291,5.60399523799829,15.5177415223901,13.1685555261876,4.36758730655925,9.91876034279095,10.8551024158863,2.2562800066483,4.03314713954749,2.21303207885497,8.39673357285626,1.42769420259154,7.06663573207384,5.78051644403928,8.07085833495388,15.8270162625963,12.2042270549493,2.7614397042404,19.6927059895112,15.4181173115977,3.42898616795984,8.59665412356402,7.85720083444267,9.49877121558561,14.7856086217045,4.11979266172207,6.24862478891078,10.127653028558,4.05861185241004,13.6743702254555,6.57909320228619,8.435590032618,15.1249270149274,12.5207179086803,7.49982570229601,12.4424977220965,11.532346480496,21.6279081783733,27.2316276399301,17.2850981333669,22.9793932646141,4.14615371158673,2.95977481032821,7.91898733922587,10.7894459835307,11.6169777418761,6.75597036638808,7.84762057278609,21.9158092922279,9.50081401361934,1.9110067515482,7.14765441766563,3.79232668158544,9.29931402945002,17.3858272302579,7.21540228257228,15.5412123122278,13.9989151217039,13.8251932362818,5.16272830584333,4.61494802849205,4.94237747603115,11.0080633049642,6.8732060563215,7.44495325594368,6.68877257284203,9.39585627101456,12.7595303699816,9.02192644868794,3.23714418593947,10.5742691061934,5.799072156691,28.1712375974301,9.12363907502212,9.54963720774568,5.11356390343545,7.00265708641552,1.75904826792687,6.49140227336696,12.8880844040268,15.517728795781,6.58444214906132,12.7477127312031,6.59894331884553,9.03018948728748,10.6936704117751,12.2570160999186,4.24817786719542,12.0299415014213,10.7000094036138,17.5896434427875,9.2848048074942,21.1736923029415,9.14751580256518,16.7977369296699,7.79839781787719,10.4637895700559,10.5706946669434,2.44769364687293,4.36350690340377,23.2771809826776,8.18389039966853,7.39481005810269,9.51778436672336,12.3643096338377,3.60576387480195,13.3033426062009,6.93524042245476,4.27547848424897,6.52453786697399,1.25353769646188,6.74430414142331,2.41167717140561,4.1458471972939,11.894794524118,7.88965733033629,25.710958598084,7.10478008196067,11.6079715733254,9.41907645677153,15.7208480947067,12.5312657154096,7.18465268059972,15.4004985488376,10.1028079521881,10.4714419873307,8.64916927019635,8.79155300998525,7.68436890319551,11.5843369372164,7.72496738116647,7.03922827210363,16.502594964687,16.6827433109453,30.6248116125336,7.84967795005002,8.01421230758082|short_description=p1@ZFX}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7543 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12869 | |||
|TSSclassifier=S | |||
|UniProt=P17010,C9JGU9,F5GYV7,F5H6Z8,Q59EB9,Q8WXB7 | |||
|association_with_transcript=0bp_to_ENST00000379177,ENST00000379188,ENST00000419690,ENST00000535562,ENST00000536464,NM_001178084,NM_001178085,NM_003410_5end | |||
|description=CAGE_peak_1_at_ZFX_5end | |||
|id=chrX:24167828..24167890,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.80e-27!140;CL:0000766!2.07e-23!76;CL:0002031!1.03e-20!124;CL:0000557!4.36e-20!71;CL:0000037!1.30e-19!172;CL:0000566!1.30e-19!172;CL:0002087!3.33e-19!119;CL:0000839!4.44e-19!70;CL:0000860!5.05e-19!45;CL:0002057!1.43e-18!42;CL:0002009!1.88e-18!65;CL:0002032!4.48e-18!165;CL:0000837!4.48e-18!165;CL:0002194!1.03e-17!63;CL:0000576!1.03e-17!63;CL:0000040!1.03e-17!63;CL:0000559!1.03e-17!63;CL:0000988!2.49e-16!182;CL:0000763!1.63e-15!112;CL:0000049!1.63e-15!112;CL:0000134!8.72e-09!358;CL:0002320!8.72e-08!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.89e-16;33!CL:0002057;5.89e-16;33!CL:0000473;1.26e-12;39!CL:0000234;1.26e-12;39!CL:0000576;1.54e-11;48!CL:0000766;1.01e-09;69!CL:0002087;7.72e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.36e-26,136;CL:0000766,1.37e-22,72;CL:0002031,7.92e-20,120;CL:0000557,2.87e-19,67;CL:0000037,9.69e-19,168;CL:0000860,1.43e-18,42;CL:0002057,1.43e-18,42;CL:0002087,2.46e-18,115;CL:0000839,2.93e-18,66;CL:0002009,1.20e-17,61;CL:0000473,2.22e-17,48;CL:0000234,2.22e-17,48;CL:0002032,3.15e-17,161;CL:0000837,3.15e-17,161;CL:0002194,6.57e-17,59;CL:0000576,6.57e-17,59;CL:0000040,6.57e-17,59;CL:0000559,6.57e-17,59;CL:0000988,6.08e-16,177;CL:0000763,1.09e-14,108;CL:0000049,1.09e-14,108;CL:0000134,1.39e-08,354;CL:0002320,1.36e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.09e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.58e-17!102;UBERON:0003061!7.58e-17!102;UBERON:0001474!1.48e-16!86;UBERON:0004765!1.05e-15!101;UBERON:0001434!1.05e-15!101;UBERON:0002371!1.84e-15!80;UBERON:0002193!1.54e-14!112;UBERON:0002405!1.24e-10!115;UBERON:0002384!1.81e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.27e-16,98;UBERON:0003061,5.27e-16,98;UBERON:0001474,1.01e-15,82;UBERON:0004765,7.61e-15,90;UBERON:0002371,1.23e-14,76;UBERON:0001434,7.50e-14,100;UBERON:0002193,1.00e-13,108;UBERON:0002405,1.22e-12,93;UBERON:0002384,2.88e-08,371 | |||
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| |||
|short_description=p1@ZFX | |||
}} |
Revision as of 11:38, 14 September 2013
Short description: | p1@ZFX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ZFX_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000379177, ENST00000379188, ENST00000419690, ENST00000535562, ENST00000536464, NM_001178084, NM_001178085, NM_003410_5end |
EntrezGene: | ZFX |
HGNC: | 12869 |
UniProt: | P17010C9JGU9F5GYV7F5H6Z8Q59EB9Q8WXB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.36e-26 | 136 |
myeloid leukocyte | 1.37e-22 | 72 |
hematopoietic lineage restricted progenitor cell | 7.92e-20 | 120 |
granulocyte monocyte progenitor cell | 2.87e-19 | 67 |
hematopoietic stem cell | 9.69e-19 | 168 |
classical monocyte | 1.43e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.43e-18 | 42 |
nongranular leukocyte | 2.46e-18 | 115 |
myeloid lineage restricted progenitor cell | 2.93e-18 | 66 |
macrophage dendritic cell progenitor | 1.20e-17 | 61 |
defensive cell | 2.22e-17 | 48 |
phagocyte | 2.22e-17 | 48 |
hematopoietic oligopotent progenitor cell | 3.15e-17 | 161 |
hematopoietic multipotent progenitor cell | 3.15e-17 | 161 |
monopoietic cell | 6.57e-17 | 59 |
monocyte | 6.57e-17 | 59 |
monoblast | 6.57e-17 | 59 |
promonocyte | 6.57e-17 | 59 |
hematopoietic cell | 6.08e-16 | 177 |
myeloid cell | 1.09e-14 | 108 |
common myeloid progenitor | 1.09e-14 | 108 |
mesenchymal cell | 1.39e-08 | 354 |
connective tissue cell | 1.36e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.27e-16 | 98 |
blood island | 5.27e-16 | 98 |
bone element | 1.01e-15 | 82 |
skeletal element | 7.61e-15 | 90 |
bone marrow | 1.23e-14 | 76 |
skeletal system | 7.50e-14 | 100 |
hemolymphoid system | 1.00e-13 | 108 |
immune system | 1.22e-12 | 93 |
connective tissue | 2.88e-08 | 371 |
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