FFCP PHASE1:Mm9::chr7:126669694..126669714,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=272428|HGNC=|MCL_coexpression_id=179|UniProt=Q8BGA8|association_with_transcript=-64bp_to_NM_178758,uc009jle.1,uc009jlf.1,uc009jlg.1,uc012fsu.1_5end|description=CAGE_peak_4_at_Acsm5_5end|id=chr7:126669694..126669714,+|ontology_enrichment_celltype=CL:0000066!1.16e-10!25;CL:0000239!7.20e-10!6;CL:0000677!7.20e-10!6;CL:0000212!7.20e-10!6;CL:0000584!7.20e-10!6;CL:0000223!1.82e-08!20;CL:0000075!2.47e-08!7;CL:0002563!2.87e-08!9;CL:0002251!2.87e-08!9|ontology_enrichment_celltype_v019_2=CL:0000182,5.10e-11,5;CL:0000066,3.92e-09,25;CL:0000223,2.91e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!6.74e-15!49;UBERON:0005173!6.74e-15!49;UBERON:0002417!6.74e-15!49;UBERON:0000916!6.74e-15!49;UBERON:0000344!1.42e-13!15;UBERON:0002107!1.71e-13!22;UBERON:0007499!1.71e-13!22;UBERON:0006925!1.71e-13!22;UBERON:0009497!1.71e-13!22;UBERON:0000015!1.71e-13!22;UBERON:0002423!1.71e-13!22;UBERON:0006235!1.71e-13!22;UBERON:0008835!1.71e-13!22;UBERON:0003894!1.71e-13!22;UBERON:0004161!1.71e-13!22;UBERON:0008836!1.71e-13!22;UBERON:0009854!9.72e-13!23;UBERON:0009856!9.72e-13!23;UBERON:0002365!2.04e-11!25;UBERON:0002330!2.04e-11!25;UBERON:0001242!6.22e-11!13;UBERON:0000060!6.22e-11!13;UBERON:0001262!6.22e-11!13;UBERON:0004786!6.22e-11!13;UBERON:0009569!2.16e-09!66;UBERON:0003929!4.68e-09!55;UBERON:0003350!2.87e-08!9;UBERON:0004808!2.87e-08!9;UBERON:0001277!2.87e-08!9;UBERON:0004923!1.99e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.32e-22,22;UBERON:0007499,1.32e-22,22;UBERON:0006925,1.32e-22,22;UBERON:0009497,1.32e-22,22;UBERON:0000015,1.32e-22,22;UBERON:0002423,1.32e-22,22;UBERON:0006235,1.32e-22,22;UBERON:0008835,1.32e-22,22;UBERON:0003894,1.32e-22,22;UBERON:0004161,1.32e-22,22;UBERON:0008836,1.32e-22,22;UBERON:0009854,1.64e-21,23;UBERON:0009856,1.64e-21,23;UBERON:0002365,1.39e-19,25;UBERON:0002330,1.39e-19,25;UBERON:0005172,3.31e-18,49;UBERON:0005173,3.31e-18,49;UBERON:0002417,3.31e-18,49;UBERON:0000916,3.31e-18,49;UBERON:0003104,6.71e-14,61;UBERON:0009142,6.71e-14,61;UBERON:0009569,1.44e-12,66;UBERON:0003929,5.64e-12,55;UBERON:0005177,6.80e-10,79;UBERON:0005256,9.75e-10,45;UBERON:0000490,1.94e-09,66;UBERON:0003914,3.25e-09,47;UBERON:0005911,6.89e-09,69;UBERON:0002100,3.09e-08,90|phase1_expression=0,0.348975407639361,1.81999695755814,1.81478526784098,3.00537437967808,0.503637815735669,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0.799962113967033,1.60586496747019,2.29692785646008,1.29228598847722,0.646413698057667,0.380046838912748,1.51218077855958,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,2.719885334831,2.69851595818909,3.89865850468601,1.79210754838934,1.96622188184453,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,0.148442139064825,0,0,0.230615497256059,0,0,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0.660837565967596,0.264450566663544,0,0,0,0,0,0,1.89811624617805,0,0,0,0,0.898819408654221,0.216138049874694,0.597423819763102,0,0,0,0.203651327845314,0.581857461502877,1.75339549725796,1.39120381673366,3.54264355151045,7.84993639206874,8.39100714668244,3.85388415213294,0,0,0,0,0,0,0,0.162135226775035,1.09824565275233,2.87536413054709,2.23284568601102,1.5601883655728,1.26289438973556,3.40855085691633,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0.382576664137687,0,0|short_description=p4@Acsm5}} | ||
|EntrezGene=272428 | |||
|HGNC= | |||
|MCL_coexpression_id=179 | |||
|UniProt=Q8BGA8 | |||
|association_with_transcript=-64bp_to_NM_178758,uc009jle.1,uc009jlf.1,uc009jlg.1,uc012fsu.1_5end | |||
|description=CAGE_peak_4_at_Acsm5_5end | |||
|id=chr7:126669694..126669714,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.16e-10!25;CL:0000239!7.20e-10!6;CL:0000677!7.20e-10!6;CL:0000212!7.20e-10!6;CL:0000584!7.20e-10!6;CL:0000223!1.82e-08!20;CL:0000075!2.47e-08!7;CL:0002563!2.87e-08!9;CL:0002251!2.87e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.10e-11,5;CL:0000066,3.92e-09,25;CL:0000223,2.91e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!6.74e-15!49;UBERON:0005173!6.74e-15!49;UBERON:0002417!6.74e-15!49;UBERON:0000916!6.74e-15!49;UBERON:0000344!1.42e-13!15;UBERON:0002107!1.71e-13!22;UBERON:0007499!1.71e-13!22;UBERON:0006925!1.71e-13!22;UBERON:0009497!1.71e-13!22;UBERON:0000015!1.71e-13!22;UBERON:0002423!1.71e-13!22;UBERON:0006235!1.71e-13!22;UBERON:0008835!1.71e-13!22;UBERON:0003894!1.71e-13!22;UBERON:0004161!1.71e-13!22;UBERON:0008836!1.71e-13!22;UBERON:0009854!9.72e-13!23;UBERON:0009856!9.72e-13!23;UBERON:0002365!2.04e-11!25;UBERON:0002330!2.04e-11!25;UBERON:0001242!6.22e-11!13;UBERON:0000060!6.22e-11!13;UBERON:0001262!6.22e-11!13;UBERON:0004786!6.22e-11!13;UBERON:0009569!2.16e-09!66;UBERON:0003929!4.68e-09!55;UBERON:0003350!2.87e-08!9;UBERON:0004808!2.87e-08!9;UBERON:0001277!2.87e-08!9;UBERON:0004923!1.99e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.32e-22,22;UBERON:0007499,1.32e-22,22;UBERON:0006925,1.32e-22,22;UBERON:0009497,1.32e-22,22;UBERON:0000015,1.32e-22,22;UBERON:0002423,1.32e-22,22;UBERON:0006235,1.32e-22,22;UBERON:0008835,1.32e-22,22;UBERON:0003894,1.32e-22,22;UBERON:0004161,1.32e-22,22;UBERON:0008836,1.32e-22,22;UBERON:0009854,1.64e-21,23;UBERON:0009856,1.64e-21,23;UBERON:0002365,1.39e-19,25;UBERON:0002330,1.39e-19,25;UBERON:0005172,3.31e-18,49;UBERON:0005173,3.31e-18,49;UBERON:0002417,3.31e-18,49;UBERON:0000916,3.31e-18,49;UBERON:0003104,6.71e-14,61;UBERON:0009142,6.71e-14,61;UBERON:0009569,1.44e-12,66;UBERON:0003929,5.64e-12,55;UBERON:0005177,6.80e-10,79;UBERON:0005256,9.75e-10,45;UBERON:0000490,1.94e-09,66;UBERON:0003914,3.25e-09,47;UBERON:0005911,6.89e-09,69;UBERON:0002100,3.09e-08,90 | |||
|phase1_expression=0,0.348975407639361,1.81999695755814,1.81478526784098,3.00537437967808,0.503637815735669,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0.799962113967033,1.60586496747019,2.29692785646008,1.29228598847722,0.646413698057667,0.380046838912748,1.51218077855958,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,2.719885334831,2.69851595818909,3.89865850468601,1.79210754838934,1.96622188184453,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,0.148442139064825,0,0,0.230615497256059,0,0,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0.660837565967596,0.264450566663544,0,0,0,0,0,0,1.89811624617805,0,0,0,0,0.898819408654221,0.216138049874694,0.597423819763102,0,0,0,0.203651327845314,0.581857461502877,1.75339549725796,1.39120381673366,3.54264355151045,7.84993639206874,8.39100714668244,3.85388415213294,0,0,0,0,0,0,0,0.162135226775035,1.09824565275233,2.87536413054709,2.23284568601102,1.5601883655728,1.26289438973556,3.40855085691633,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0.382576664137687,0,0 | |||
|short_description=p4@Acsm5 | |||
}} |
Revision as of 11:36, 14 September 2013
Short description: | p4@Acsm5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Acsm5_5end |
Coexpression cluster: | MCL_coexpression_mm9:179 |
Association with transcript: | -64bp_to_NM_178758, uc009jle.1, uc009jlf.1, uc009jlg.1, uc012fsu.1_5end |
EntrezGene: | Acsm5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.10e-11 | 5 |
epithelial cell | 3.92e-09 | 25 |
endodermal cell | 2.91e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
liver | 1.32e-22 | 22 |
epithelial sac | 1.32e-22 | 22 |
digestive gland | 1.32e-22 | 22 |
epithelium of foregut-midgut junction | 1.32e-22 | 22 |
anatomical boundary | 1.32e-22 | 22 |
hepatobiliary system | 1.32e-22 | 22 |
foregut-midgut junction | 1.32e-22 | 22 |
hepatic diverticulum | 1.32e-22 | 22 |
liver primordium | 1.32e-22 | 22 |
septum transversum | 1.32e-22 | 22 |
liver bud | 1.32e-22 | 22 |
digestive tract diverticulum | 1.64e-21 | 23 |
sac | 1.64e-21 | 23 |
exocrine gland | 1.39e-19 | 25 |
exocrine system | 1.39e-19 | 25 |
abdomen element | 3.31e-18 | 49 |
abdominal segment element | 3.31e-18 | 49 |
abdominal segment of trunk | 3.31e-18 | 49 |
abdomen | 3.31e-18 | 49 |
mesenchyme | 6.71e-14 | 61 |
entire embryonic mesenchyme | 6.71e-14 | 61 |
subdivision of trunk | 1.44e-12 | 66 |
gut epithelium | 5.64e-12 | 55 |
trunk region element | 6.80e-10 | 79 |
trunk mesenchyme | 9.75e-10 | 45 |
unilaminar epithelium | 1.94e-09 | 66 |
epithelial tube | 3.25e-09 | 47 |
endo-epithelium | 6.89e-09 | 69 |
trunk | 3.09e-08 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.