FFCP PHASE1:Hg19::chrX:1594302..1594330,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C752|description=CAGE_peak_at_chrX:1594302..1594330,-|id=chrX:1594302..1594330,-|ontology_enrichment_celltype=CL:0002032!1.12e-22!165;CL:0000837!1.12e-22!165;CL:0002031!1.19e-21!124;CL:0000037!1.44e-21!172;CL:0000566!1.44e-21!172;CL:0002057!1.73e-20!42;CL:0002087!1.74e-20!119;CL:0000988!3.94e-20!182;CL:0000860!5.65e-19!45;CL:0000738!1.03e-18!140;CL:0000839!1.61e-15!70;CL:0000763!1.65e-15!112;CL:0000049!1.65e-15!112;CL:0000557!2.88e-15!71;CL:0002194!5.71e-15!63;CL:0000576!5.71e-15!63;CL:0000040!5.71e-15!63;CL:0000559!5.71e-15!63;CL:0002009!1.93e-14!65;CL:0000766!4.22e-14!76;CL:0000945!1.09e-09!24;CL:0000826!1.09e-09!24;CL:0002127!3.34e-08!1;CL:0000914!3.34e-08!1;CL:0000911!3.34e-08!1;CL:0000814!3.34e-08!1;CL:0002042!3.34e-08!1;CL:0002039!3.34e-08!1;CL:0002040!3.34e-08!1;CL:0002041!3.34e-08!1;CL:0000134!7.03e-08!358;CL:0000946!9.94e-08!1;CL:0000786!9.94e-08!1;CL:0000980!9.94e-08!1;CL:0002320!1.24e-07!365;CL:0000838!2.86e-07!52;CL:0000542!4.12e-07!53;CL:0000051!4.12e-07!53;CL:0000219!9.10e-07!390|ontology_enrichment_celltype_v019=CL:0000945;4.28e-13;24!CL:0000542;2.30e-07;53!CL:0000624;7.17e-07;6|ontology_enrichment_celltype_v019_2=CL:0000945,4.28e-13,24;CL:0000826,4.28e-13,24;CL:0000838,9.83e-11,52;CL:0000542,1.53e-10,53;CL:0000051,1.53e-10,53;CL:0000624,7.17e-07,6|ontology_enrichment_development_v019=CL:0000051;2.30e-07;53|ontology_enrichment_disease=DOID:4960!1.14e-07!1;DOID:0070004!1.14e-07!1;DOID:2531!1.92e-07!51;DOID:0060083!1.92e-07!51|ontology_enrichment_disease_v019=DOID:0060058;2.84e-14;10|ontology_enrichment_disease_v019_2=DOID:0060058,2.84e-14,10|ontology_enrichment_uberon=UBERON:0002371!2.38e-15!80;UBERON:0002390!3.21e-15!102;UBERON:0003061!3.21e-15!102;UBERON:0001474!4.34e-14!86;UBERON:0002193!1.41e-13!112;UBERON:0002405!3.88e-13!115;UBERON:0004765!1.37e-11!101;UBERON:0001434!1.37e-11!101;UBERON:0002363!7.10e-08!1;UBERON:0007647!7.10e-08!1;UBERON:0010115!7.10e-08!1;UBERON:0002038!1.21e-07!1;UBERON:0009661!1.21e-07!1;UBERON:0002384!2.68e-07!375|ontology_enrichment_uberon_v019=UBERON:0002106;2.07e-12;3!UBERON:0004177;5.73e-08;5!UBERON:0005057;5.73e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.07e-12,3;UBERON:0004854,2.07e-12,3;UBERON:0009034,2.07e-12,3;UBERON:0002095,2.07e-12,3;UBERON:0004782,2.07e-12,3;UBERON:0003281,2.07e-12,3;UBERON:0009664,2.07e-12,3;UBERON:0002296,2.07e-12,3;UBERON:0005602,2.07e-12,3;UBERON:0001179,2.07e-12,3;UBERON:0006293,2.07e-12,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22261449196722,0.821005894499457,1.57421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436194716338694,0,0.242584061187816,0,0,0.929119112685311,0,0,0,0,0,0,0.752969358170419,0,0.449446968890169,0.306083892370903,0,0.639337125799041,0,0,0.426224750532694,0.580418477257168,0,0,0.502497330513487,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96244347098577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626719583092093,0,0.677167111206413,0,0,1.27753871307098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.627921025580099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07047417247523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89770508107223,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chrX:1594302..1594330,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C752 | |||
|description=CAGE_peak_at_chrX:1594302..1594330,- | |||
|id=chrX:1594302..1594330,- | |||
|ontology_enrichment_celltype=CL:0002032!1.12e-22!165;CL:0000837!1.12e-22!165;CL:0002031!1.19e-21!124;CL:0000037!1.44e-21!172;CL:0000566!1.44e-21!172;CL:0002057!1.73e-20!42;CL:0002087!1.74e-20!119;CL:0000988!3.94e-20!182;CL:0000860!5.65e-19!45;CL:0000738!1.03e-18!140;CL:0000839!1.61e-15!70;CL:0000763!1.65e-15!112;CL:0000049!1.65e-15!112;CL:0000557!2.88e-15!71;CL:0002194!5.71e-15!63;CL:0000576!5.71e-15!63;CL:0000040!5.71e-15!63;CL:0000559!5.71e-15!63;CL:0002009!1.93e-14!65;CL:0000766!4.22e-14!76;CL:0000945!1.09e-09!24;CL:0000826!1.09e-09!24;CL:0002127!3.34e-08!1;CL:0000914!3.34e-08!1;CL:0000911!3.34e-08!1;CL:0000814!3.34e-08!1;CL:0002042!3.34e-08!1;CL:0002039!3.34e-08!1;CL:0002040!3.34e-08!1;CL:0002041!3.34e-08!1;CL:0000134!7.03e-08!358;CL:0000946!9.94e-08!1;CL:0000786!9.94e-08!1;CL:0000980!9.94e-08!1;CL:0002320!1.24e-07!365;CL:0000838!2.86e-07!52;CL:0000542!4.12e-07!53;CL:0000051!4.12e-07!53;CL:0000219!9.10e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.28e-13;24!CL:0000542;2.30e-07;53!CL:0000624;7.17e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.28e-13,24;CL:0000826,4.28e-13,24;CL:0000838,9.83e-11,52;CL:0000542,1.53e-10,53;CL:0000051,1.53e-10,53;CL:0000624,7.17e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000051;2.30e-07;53 | |||
|ontology_enrichment_disease=DOID:4960!1.14e-07!1;DOID:0070004!1.14e-07!1;DOID:2531!1.92e-07!51;DOID:0060083!1.92e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.84e-14;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.84e-14,10 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.38e-15!80;UBERON:0002390!3.21e-15!102;UBERON:0003061!3.21e-15!102;UBERON:0001474!4.34e-14!86;UBERON:0002193!1.41e-13!112;UBERON:0002405!3.88e-13!115;UBERON:0004765!1.37e-11!101;UBERON:0001434!1.37e-11!101;UBERON:0002363!7.10e-08!1;UBERON:0007647!7.10e-08!1;UBERON:0010115!7.10e-08!1;UBERON:0002038!1.21e-07!1;UBERON:0009661!1.21e-07!1;UBERON:0002384!2.68e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.07e-12;3!UBERON:0004177;5.73e-08;5!UBERON:0005057;5.73e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.07e-12,3;UBERON:0004854,2.07e-12,3;UBERON:0009034,2.07e-12,3;UBERON:0002095,2.07e-12,3;UBERON:0004782,2.07e-12,3;UBERON:0003281,2.07e-12,3;UBERON:0009664,2.07e-12,3;UBERON:0002296,2.07e-12,3;UBERON:0005602,2.07e-12,3;UBERON:0001179,2.07e-12,3;UBERON:0006293,2.07e-12,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22261449196722,0.821005894499457,1.57421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436194716338694,0,0.242584061187816,0,0,0.929119112685311,0,0,0,0,0,0,0.752969358170419,0,0.449446968890169,0.306083892370903,0,0.639337125799041,0,0,0.426224750532694,0.580418477257168,0,0,0.502497330513487,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96244347098577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626719583092093,0,0.677167111206413,0,0,1.27753871307098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.627921025580099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07047417247523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89770508107223,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:1594302..1594330,- | |||
}} |
Revision as of 11:28, 14 September 2013
Short description: | p@chrX:1594302..1594330, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:1594302..1594330, - |
Coexpression cluster: | C752_CD4_acute_NK_chronic_CD14_Neutrophils_lymphoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.28e-13 | 24 |
pro-B cell | 4.28e-13 | 24 |
lymphoid lineage restricted progenitor cell | 9.83e-11 | 52 |
lymphocyte | 1.53e-10 | 53 |
common lymphoid progenitor | 1.53e-10 | 53 |
CD4-positive, alpha-beta T cell | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.07e-12 | 3 |
gastrointestinal system mesentery | 2.07e-12 | 3 |
stomach region | 2.07e-12 | 3 |
mesentery | 2.07e-12 | 3 |
gastrointestinal system serosa | 2.07e-12 | 3 |
mesentery of stomach | 2.07e-12 | 3 |
gut mesentery | 2.07e-12 | 3 |
dorsal mesentery | 2.07e-12 | 3 |
dorsal mesogastrium | 2.07e-12 | 3 |
peritoneal cavity | 2.07e-12 | 3 |
spleen primordium | 2.07e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.84e-14 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.