FFCP PHASE1:Hg19::chrX:153191709..153191767,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=393|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=674|TSSclassifier=S|UniProt=Q86UY3,F8WAR0,P98171|association_with_transcript=0bp_to_ENST00000370028,ENST00000404127,NM_001164741,NM_001666_5end|coexpression_cluster_id=C805|description=CAGE_peak_2_at_ARHGAP4_5end|id=chrX:153191709..153191767,-|ontology_enrichment_celltype=CL:0000037!3.04e-68!172;CL:0000566!3.04e-68!172;CL:0000988!4.96e-66!182;CL:0002032!1.86e-63!165;CL:0000837!1.86e-63!165;CL:0000738!3.56e-57!140;CL:0002087!1.06e-48!119;CL:0002031!4.24e-47!124;CL:0000763!5.06e-36!112;CL:0000049!5.06e-36!112;CL:0000766!6.91e-28!76;CL:0000542!4.25e-24!53;CL:0000051!4.25e-24!53;CL:0000838!8.04e-24!52;CL:0000557!2.07e-23!71;CL:0000839!1.24e-22!70;CL:0002057!4.08e-22!42;CL:0002194!1.00e-21!63;CL:0000576!1.00e-21!63;CL:0000040!1.00e-21!63;CL:0000559!1.00e-21!63;CL:0002009!2.21e-21!65;CL:0000860!8.59e-19!45;CL:0000084!1.78e-13!25;CL:0000827!1.78e-13!25;CL:0000791!9.24e-12!18;CL:0000789!9.24e-12!18;CL:0002420!9.24e-12!18;CL:0002419!9.24e-12!18;CL:0000790!9.24e-12!18;CL:0000945!6.52e-10!24;CL:0000826!6.52e-10!24;CL:0000236!5.85e-08!14;CL:0000625!1.91e-07!11;CL:0002393!2.71e-07!9;CL:0002397!2.71e-07!9;CL:0000134!3.71e-07!358;CL:0002320!6.00e-07!365|ontology_enrichment_celltype_v019=CL:0000576;1.28e-16;48!CL:0000860;3.50e-16;33!CL:0002057;3.50e-16;33!CL:0002087;4.79e-16;104!CL:0000473;8.16e-16;39!CL:0000234;8.16e-16;39!CL:0000542;1.75e-15;53!CL:0000766;6.30e-15;69!CL:0000084;1.55e-14;25!CL:0000763;1.50e-13;100!CL:0000738;1.61e-13;136!CL:0000791;1.13e-12;18!CL:0000789;1.13e-12;18!CL:0002419;1.13e-12;18!CL:0000988;1.34e-12;177!CL:0000945;1.25e-10;24!CL:0000236;1.96e-08;13!CL:0000625;5.66e-08;11!CL:0000094;8.69e-07;8|ontology_enrichment_celltype_v019_2=CL:0000037,1.93e-78,168;CL:0000988,6.89e-76,177;CL:0002032,3.82e-73,161;CL:0000837,3.82e-73,161;CL:0000738,1.70e-66,136;CL:0002087,6.19e-58,115;CL:0002031,6.11e-56,120;CL:0000763,8.22e-43,108;CL:0000049,8.22e-43,108;CL:0000766,6.09e-35,72;CL:0000557,9.68e-30,67;CL:0000839,7.78e-29,66;CL:0002194,4.70e-28,59;CL:0000576,4.70e-28,59;CL:0000040,4.70e-28,59;CL:0000559,4.70e-28,59;CL:0002009,1.56e-27,61;CL:0000473,1.79e-26,48;CL:0000234,1.79e-26,48;CL:0000542,4.25e-26,53;CL:0000051,4.25e-26,53;CL:0000838,8.50e-26,52;CL:0000860,6.13e-24,42;CL:0002057,6.13e-24,42;CL:0000084,1.57e-14,25;CL:0000827,1.57e-14,25;CL:0000791,1.16e-12,18;CL:0000789,1.16e-12,18;CL:0002420,1.16e-12,18;CL:0002419,1.16e-12,18;CL:0000790,1.16e-12,18;CL:0000945,1.19e-10,24;CL:0000826,1.19e-10,24;CL:0000236,1.58e-08,14;CL:0000134,2.42e-08,354;CL:0000625,5.72e-08,11;CL:0002393,8.40e-08,9;CL:0002397,8.40e-08,9;CL:0002320,1.39e-07,361;CL:0000094,8.46e-07,8|ontology_enrichment_development_v019=CL:0002057;3.02e-17;42!CL:0000051;1.75e-15;53!CL:0000790;1.13e-12;18!CL:0000049;2.75e-12;108|ontology_enrichment_disease=DOID:2531!1.59e-13!51;DOID:0060083!1.59e-13!51;DOID:1240!5.64e-12!39;DOID:8692!1.57e-09!31|ontology_enrichment_disease_v019=DOID:1240;4.06e-10;39!DOID:8692;6.87e-10;31!DOID:2531;3.75e-09;51!DOID:0060083;3.75e-09;51|ontology_enrichment_disease_v019_2=DOID:2531,7.90e-15,51;DOID:0060083,7.90e-15,51;DOID:1240,6.77e-13,39;DOID:8692,3.08e-10,31|ontology_enrichment_uberon=UBERON:0002390!1.05e-29!102;UBERON:0003061!1.05e-29!102;UBERON:0002193!7.19e-27!112;UBERON:0002371!8.61e-20!80;UBERON:0001474!1.17e-16!86;UBERON:0002405!5.35e-14!115;UBERON:0004765!1.57e-11!101;UBERON:0001434!1.57e-11!101;UBERON:0000178!2.70e-08!15;UBERON:0000179!2.70e-08!15;UBERON:0000463!2.70e-08!15;UBERON:0003081!8.18e-08!216;UBERON:0007023!1.75e-07!115|ontology_enrichment_uberon_v019=UBERON:0000178;6.66e-09;15!UBERON:0000179;6.66e-09;15!UBERON:0000463;6.66e-09;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.26e-36,98;UBERON:0003061,1.26e-36,98;UBERON:0002193,9.94e-32,108;UBERON:0002371,2.19e-25,76;UBERON:0002405,4.11e-24,93;UBERON:0001474,5.42e-22,82;UBERON:0004765,1.05e-17,90;UBERON:0001434,2.22e-13,100;UBERON:0003081,6.74e-10,203;UBERON:0000178,6.83e-09,15;UBERON:0000179,6.83e-09,15;UBERON:0000463,6.83e-09,15;UBERON:0002384,4.49e-07,371;UBERON:0007023,5.63e-07,114|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0.491467873003018,2.09340350391728,0,0.527533956456907,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.273748850145768,0.376627918784408,7.48851376329922,6.89644951379544,6.84783797429009,41.6966133459838,33.3931576344575,57.9012301202124,0,0,0.739508020333575,23.2401601740905,18.7663386883396,35.5256531595165,110.245086297844,73.599812221542,84.6342395791822,38.9612925177468,20.0814072931767,32.1969459542733,38.8213297541438,27.5849438892831,34.2043526274821,38.5832201263436,34.9492704818552,29.4221052350348,39.1261653558125,39.7049095120106,37.600674552285,55.8488002793322,40.665535065781,37.9194162464157,37.4602255689783,28.9280519061317,29.6634999467512,57.8498556581006,32.7347607617615,49.2289586865262,21.7701858123233,37.299703975245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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=393 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=674 | |||
|TSSclassifier=S | |||
|UniProt=Q86UY3,F8WAR0,P98171 | |||
|association_with_transcript=0bp_to_ENST00000370028,ENST00000404127,NM_001164741,NM_001666_5end | |||
|coexpression_cluster_id=C805 | |||
|description=CAGE_peak_2_at_ARHGAP4_5end | |||
|id=chrX:153191709..153191767,- | |||
|ontology_enrichment_celltype=CL:0000037!3.04e-68!172;CL:0000566!3.04e-68!172;CL:0000988!4.96e-66!182;CL:0002032!1.86e-63!165;CL:0000837!1.86e-63!165;CL:0000738!3.56e-57!140;CL:0002087!1.06e-48!119;CL:0002031!4.24e-47!124;CL:0000763!5.06e-36!112;CL:0000049!5.06e-36!112;CL:0000766!6.91e-28!76;CL:0000542!4.25e-24!53;CL:0000051!4.25e-24!53;CL:0000838!8.04e-24!52;CL:0000557!2.07e-23!71;CL:0000839!1.24e-22!70;CL:0002057!4.08e-22!42;CL:0002194!1.00e-21!63;CL:0000576!1.00e-21!63;CL:0000040!1.00e-21!63;CL:0000559!1.00e-21!63;CL:0002009!2.21e-21!65;CL:0000860!8.59e-19!45;CL:0000084!1.78e-13!25;CL:0000827!1.78e-13!25;CL:0000791!9.24e-12!18;CL:0000789!9.24e-12!18;CL:0002420!9.24e-12!18;CL:0002419!9.24e-12!18;CL:0000790!9.24e-12!18;CL:0000945!6.52e-10!24;CL:0000826!6.52e-10!24;CL:0000236!5.85e-08!14;CL:0000625!1.91e-07!11;CL:0002393!2.71e-07!9;CL:0002397!2.71e-07!9;CL:0000134!3.71e-07!358;CL:0002320!6.00e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.28e-16;48!CL:0000860;3.50e-16;33!CL:0002057;3.50e-16;33!CL:0002087;4.79e-16;104!CL:0000473;8.16e-16;39!CL:0000234;8.16e-16;39!CL:0000542;1.75e-15;53!CL:0000766;6.30e-15;69!CL:0000084;1.55e-14;25!CL:0000763;1.50e-13;100!CL:0000738;1.61e-13;136!CL:0000791;1.13e-12;18!CL:0000789;1.13e-12;18!CL:0002419;1.13e-12;18!CL:0000988;1.34e-12;177!CL:0000945;1.25e-10;24!CL:0000236;1.96e-08;13!CL:0000625;5.66e-08;11!CL:0000094;8.69e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.93e-78,168;CL:0000988,6.89e-76,177;CL:0002032,3.82e-73,161;CL:0000837,3.82e-73,161;CL:0000738,1.70e-66,136;CL:0002087,6.19e-58,115;CL:0002031,6.11e-56,120;CL:0000763,8.22e-43,108;CL:0000049,8.22e-43,108;CL:0000766,6.09e-35,72;CL:0000557,9.68e-30,67;CL:0000839,7.78e-29,66;CL:0002194,4.70e-28,59;CL:0000576,4.70e-28,59;CL:0000040,4.70e-28,59;CL:0000559,4.70e-28,59;CL:0002009,1.56e-27,61;CL:0000473,1.79e-26,48;CL:0000234,1.79e-26,48;CL:0000542,4.25e-26,53;CL:0000051,4.25e-26,53;CL:0000838,8.50e-26,52;CL:0000860,6.13e-24,42;CL:0002057,6.13e-24,42;CL:0000084,1.57e-14,25;CL:0000827,1.57e-14,25;CL:0000791,1.16e-12,18;CL:0000789,1.16e-12,18;CL:0002420,1.16e-12,18;CL:0002419,1.16e-12,18;CL:0000790,1.16e-12,18;CL:0000945,1.19e-10,24;CL:0000826,1.19e-10,24;CL:0000236,1.58e-08,14;CL:0000134,2.42e-08,354;CL:0000625,5.72e-08,11;CL:0002393,8.40e-08,9;CL:0002397,8.40e-08,9;CL:0002320,1.39e-07,361;CL:0000094,8.46e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.02e-17;42!CL:0000051;1.75e-15;53!CL:0000790;1.13e-12;18!CL:0000049;2.75e-12;108 | |||
|ontology_enrichment_disease=DOID:2531!1.59e-13!51;DOID:0060083!1.59e-13!51;DOID:1240!5.64e-12!39;DOID:8692!1.57e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.06e-10;39!DOID:8692;6.87e-10;31!DOID:2531;3.75e-09;51!DOID:0060083;3.75e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.90e-15,51;DOID:0060083,7.90e-15,51;DOID:1240,6.77e-13,39;DOID:8692,3.08e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.05e-29!102;UBERON:0003061!1.05e-29!102;UBERON:0002193!7.19e-27!112;UBERON:0002371!8.61e-20!80;UBERON:0001474!1.17e-16!86;UBERON:0002405!5.35e-14!115;UBERON:0004765!1.57e-11!101;UBERON:0001434!1.57e-11!101;UBERON:0000178!2.70e-08!15;UBERON:0000179!2.70e-08!15;UBERON:0000463!2.70e-08!15;UBERON:0003081!8.18e-08!216;UBERON:0007023!1.75e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.66e-09;15!UBERON:0000179;6.66e-09;15!UBERON:0000463;6.66e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.26e-36,98;UBERON:0003061,1.26e-36,98;UBERON:0002193,9.94e-32,108;UBERON:0002371,2.19e-25,76;UBERON:0002405,4.11e-24,93;UBERON:0001474,5.42e-22,82;UBERON:0004765,1.05e-17,90;UBERON:0001434,2.22e-13,100;UBERON:0003081,6.74e-10,203;UBERON:0000178,6.83e-09,15;UBERON:0000179,6.83e-09,15;UBERON:0000463,6.83e-09,15;UBERON:0002384,4.49e-07,371;UBERON:0007023,5.63e-07,114 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0.491467873003018,2.09340350391728,0,0.527533956456907,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.273748850145768,0.376627918784408,7.48851376329922,6.89644951379544,6.84783797429009,41.6966133459838,33.3931576344575,57.9012301202124,0,0,0.739508020333575,23.2401601740905,18.7663386883396,35.5256531595165,110.245086297844,73.599812221542,84.6342395791822,38.9612925177468,20.0814072931767,32.1969459542733,38.8213297541438,27.5849438892831,34.2043526274821,38.5832201263436,34.9492704818552,29.4221052350348,39.1261653558125,39.7049095120106,37.600674552285,55.8488002793322,40.665535065781,37.9194162464157,37.4602255689783,28.9280519061317,29.6634999467512,57.8498556581006,32.7347607617615,49.2289586865262,21.7701858123233,37.2997039752452,34.5242047931482,58.9124754416026,36.8800396049241,37.3693349397345,42.7122730936464,39.1112188815151,51.2565673504075,34.507771650102,37.9325965067192,44.6211966291647,49.0112264243705,70.1594189884644,45.9152433663343,54.3670574749036,60.220934029444,42.7530060614233,57.5725742357322,67.0349202160934,64.1151179713865,22.879511779972,54.067722514951,51.5915367240862,45.2334035920498,55.6550421980057,54.0267293557214,52.2225449500041,40.0702576904853,62.6134266020393,51.6768726646426,55.4296180781582,37.0079720021272,30.2674624010029,34.7666991903102,73.1760344823459,70.7419372948496,65.7924796798429,59.8527653498628,59.9696970605806,66.7561406085974,62.3445530905316,39.773533108007,53.0290633454707,44.9713806004751,53.6191650254731,51.7488931691728,49.8127301154334,52.1268157593653,44.7687028813074,40.8622350886424,65.0978012281445,56.7186555550192,78.4016428537326,40.224816657636,57.4830740402882,65.2892146416997,53.3871550161151,59.8902978929302,48.180175585375,44.6712460890736,47.1300122713429,39.4198762355609,44.9750615588445,59.1943130110042,33.6662478737629,60.4820229674197,53.220598960918,58.9435323802992,0,1.34140171940727,0,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0.756278537312543,0.443458794925128,1.49319135678314,6.35248516163906,0.728590576585084,0.370784442784429,16.2273696827342,13.5821195093428,22.7358112487259,94.6807778492208,84.0832518846788,56.8329977034234,3.37896092523399,0.860234595106124,4.85996702250632,0.56530794192401,1.67799774483962,8.52865930014209,3.76190939766259,0.775250277507987,0.35576626268671,0.66944122552934,2.41697590265488,2.28081631715554,2.4406205754817,2.57364156242108,4.86085168729056,6.78677934959006,5.16417557040191,5.51796254368279,6.13266549863533,3.79706263827252,2.74802615895611,93.5640963796049,131.845289810431,1.74437620857014,0,0.25326102332916,0,0,2.12801029319014,0,0,0,0.311211035399766,0.269421344139376,0,0,0,0.70296429550139,0,0,0,0.117434498643765,0.323745888736263,0,0,0.491337269247072,0.309977343527296,0,0,0,0,0.673344455816265,0.125118519871964,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0.309157587715317,0,0,0,0,0.252433774244115,0,0.161646056818812,0.710019185033229,0,0.169560592310488,0.193260853163297,0,0,13.2951339681259,7.1566074893602,7.55260628651869,8.08556229119889,9.08355063152262,1.09493207722749,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,2.94848165003288,2.36315962672562,35.317047953172,4.79654910318143,0,0,0,0,1.66659201285353,0.325808305310325,1.03993478527958,0,0.463721619900307,0.117408694235822,0.577465791044295,0,1.14152491340759,0,0,63.5239875705485,15.4442814991897,36.5632659230272,0,0.16798212819886,0,0,0,0,4.43396914106349,16.1128634244204,30.0625767534119,22.9150725932969,30.1719415889048,0.190493682876507,0,1.17217447210047,0,0.719792448923265,0,0,0,0,0,0,3.57656445851882,0,0,0,1.28603687131071,0,0,0,3.7983512377401,2.46972101034231,0,0,0,0,0,0,29.1897073538857,26.1173687544706,29.5167515276244,0,0,0,0.144781306667579,0,0.537182889719687,48.3086970612103,57.1389204585589,53.2600109903008,56.4709359630893,0.508189248444927,0,0,1.00509759200609,0,59.9205619157746,104.706510721409,57.6037563676089,0.12269149171914,1.50051156317903,0.542530047399471,0,0,0,0,0,0,0,0,0.184369168541703,0.173767228936166,0.391602314925481,1.02943027143257,56.0341350793025,51.3399797948308,54.5377820375601,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,1.93375119346596,0,0,0,0,0.131124414959424,8.12159303233341,2.0794141018192,5.49044838423799,0,1.58327443339314,0,1.36074964221213,0.863663664408557,3.08454505380579,1.08378575017541,5.01689773854853,3.3133915495855,8.31076008928724,5.37299411333228,1.09629938322967,1.5686127061494,0.512900250232778,0.656029291399411,0.325378394664303,5.77029665227245,0,0,0,0,0,5.31688950606671,0.308097234229289,0.15350367472613,0.551346289938122,0.322260734604821,0.290033387828457,0.852266274161009,0.534192213880424,0.165284915360978,0.192190067365106,0.638063562472921,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,1.157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| |||
|short_description=p2@ARHGAP4 | |||
}} |
Revision as of 11:19, 14 September 2013
Short description: | p2@ARHGAP4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ARHGAP4_5end |
Coexpression cluster: | C805_granulocyte_acute_CD14_Eosinophils_Dendritic_Peripheral_Basophils |
Association with transcript: | 0bp_to_ENST00000370028, ENST00000404127, NM_001164741, NM_001666_5end |
EntrezGene: | ARHGAP4 |
HGNC: | 674 |
UniProt: | Q86UY3F8WAR0P98171 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.26e-36 | 98 |
blood island | 1.26e-36 | 98 |
hemolymphoid system | 9.94e-32 | 108 |
bone marrow | 2.19e-25 | 76 |
immune system | 4.11e-24 | 93 |
bone element | 5.42e-22 | 82 |
skeletal element | 1.05e-17 | 90 |
skeletal system | 2.22e-13 | 100 |
lateral plate mesoderm | 6.74e-10 | 203 |
blood | 6.83e-09 | 15 |
haemolymphatic fluid | 6.83e-09 | 15 |
organism substance | 6.83e-09 | 15 |
connective tissue | 4.49e-07 | 371 |
adult organism | 5.63e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.90e-15 | 51 |
immune system cancer | 7.90e-15 | 51 |
leukemia | 6.77e-13 | 39 |
myeloid leukemia | 3.08e-10 | 31 |
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