FFCP PHASE1:Hg19::chrX:153141370..153141399,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3897|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6470|TSSclassifier=S|UniProt=G3XAF4,P32004,F5H1H0,F5H025,A4ZYW4|association_with_transcript=0bp_to_ENST00000361981,ENST00000370057,ENST00000538883,ENST00000543994,NM_000425,NM_001143963,NM_024003,uc004fjb.2,uc004fjc.2,uc010nuo.2_5end|description=CAGE_peak_6_at_L1CAM_5end|id=chrX:153141370..153141399,-|ontology_enrichment_celltype=CL:0000148!1.21e-07!10;CL:0000541!1.21e-07!10|ontology_enrichment_celltype_v019=CL:0000148;2.98e-17;10!CL:0002567;3.19e-16;3!CL:0000147;3.77e-12;14!CL:0000075;2.12e-10;27!CL:0000097;5.85e-10;5!CL:0000333;1.58e-09;5!CL:0000710;2.57e-08;20|ontology_enrichment_celltype_v019_2=CL:0000148,2.42e-17,10;CL:0000541,2.42e-17,10;CL:0002567,3.29e-16,3;CL:0000147,3.26e-12,14;CL:0000075,1.73e-10,27;CL:0000097,5.70e-10,5;CL:0002028,5.70e-10,5;CL:0000333,1.18e-09,41;CL:0000710,2.33e-08,20;CL:0000133,1.32e-07,59|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!2.14e-07!143|ontology_enrichment_disease_v019=DOID:154;1.03e-10;2!DOID:4236;1.03e-10;2!DOID:169;5.23e-08;6|ontology_enrichment_disease_v019_2=DOID:154,1.14e-10,2;DOID:4236,1.14e-10,2;DOID:169,4.03e-08,6|ontology_enrichment_uberon=UBERON:0001017!2.08e-21!82;UBERON:0000073!9.27e-21!94;UBERON:0001016!9.27e-21!94;UBERON:0005743!1.42e-20!86;UBERON:0000955!8.32e-17!69;UBERON:0006238!8.32e-17!69;UBERON:0002619!1.70e-15!22;UBERON:0001950!2.67e-15!20;UBERON:0001049!1.03e-14!57;UBERON:0005068!1.03e-14!57;UBERON:0006241!1.03e-14!57;UBERON:0007135!1.03e-14!57;UBERON:0001869!1.97e-14!32;UBERON:0002020!2.19e-14!34;UBERON:0003528!2.19e-14!34;UBERON:0001893!3.58e-13!34;UBERON:0002780!5.21e-13!41;UBERON:0001890!5.21e-13!41;UBERON:0006240!5.21e-13!41;UBERON:0000956!5.61e-13!25;UBERON:0000203!5.61e-13!25;UBERON:0002616!1.02e-12!59;UBERON:0003080!1.63e-12!42;UBERON:0000924!1.68e-12!173;UBERON:0006601!1.68e-12!173;UBERON:0002791!2.46e-12!33;UBERON:0004121!4.03e-12!169;UBERON:0002346!7.80e-11!90;UBERON:0007023!1.10e-10!115;UBERON:0003075!1.66e-10!86;UBERON:0007284!1.66e-10!86;UBERON:0000033!3.46e-09!123;UBERON:0000153!1.25e-08!129;UBERON:0007811!1.25e-08!129;UBERON:0003056!1.50e-08!61;UBERON:0001871!1.77e-07!7|ontology_enrichment_uberon_v019=UBERON:0000013;1.58e-09;5!UBERON:0002410;1.58e-09;5|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.15e-09,5;UBERON:0002410,1.15e-09,5;UBERON:0001016,1.98e-08,89|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0.386521706326594,0,0.286804595389004,0,0,0,0.207322110030741,0,0,0,0.643240938192885,0,0,0,0.354920400119532,0,0.241011029883482,0.330881918197182,0.217879444092406,0.71181185733329,0.539325232640658,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.439001141634502,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0.503946384596579,0.141775097242386,0,0,0.766765358330422,0,0.264145302039678,6.21984346622316,6.77363781059719,9.4681825069785,0.126995788584338,6.11181480893244,4.68869788840188,8.55362230113526,1.23392991243988,1.8020583470635,1.42913216315289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,1.60405176242628,0,0,0,0,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0.254876273045038,1.66215201785745,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0.290012154876366,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0.276283915531148,0,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,1.93866549219044,1.02044907978036,1.99613798001194,0.260427761085233,0,0,0,0,0,0.344743373241465,0,2.08349993919951,0,0.723578631752448,0,0.552896299656123,1.18219047581419,0.87754158861589,0.10893846351899,0,0.153900517007594,0.227884111694002,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0.296521128680622,0,0,0,0,0.234264445725339,0,0,0,0,0,2.14250933141343,0.063186579628488,0.300646838828985,0,0,0,0.313932918407225,0,0.284609546029793,0,0,0,0,0,0,0.290268993867255,0.292357268344742,0.164230914106418,1.163868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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3897 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6470 | |||
|TSSclassifier=S | |||
|UniProt=G3XAF4,P32004,F5H1H0,F5H025,A4ZYW4 | |||
|association_with_transcript=0bp_to_ENST00000361981,ENST00000370057,ENST00000538883,ENST00000543994,NM_000425,NM_001143963,NM_024003,uc004fjb.2,uc004fjc.2,uc010nuo.2_5end | |||
|description=CAGE_peak_6_at_L1CAM_5end | |||
|id=chrX:153141370..153141399,- | |||
|ontology_enrichment_celltype=CL:0000148!1.21e-07!10;CL:0000541!1.21e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.98e-17;10!CL:0002567;3.19e-16;3!CL:0000147;3.77e-12;14!CL:0000075;2.12e-10;27!CL:0000097;5.85e-10;5!CL:0000333;1.58e-09;5!CL:0000710;2.57e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.42e-17,10;CL:0000541,2.42e-17,10;CL:0002567,3.29e-16,3;CL:0000147,3.26e-12,14;CL:0000075,1.73e-10,27;CL:0000097,5.70e-10,5;CL:0002028,5.70e-10,5;CL:0000333,1.18e-09,41;CL:0000710,2.33e-08,20;CL:0000133,1.32e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.14e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:154;1.03e-10;2!DOID:4236;1.03e-10;2!DOID:169;5.23e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:154,1.14e-10,2;DOID:4236,1.14e-10,2;DOID:169,4.03e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.08e-21!82;UBERON:0000073!9.27e-21!94;UBERON:0001016!9.27e-21!94;UBERON:0005743!1.42e-20!86;UBERON:0000955!8.32e-17!69;UBERON:0006238!8.32e-17!69;UBERON:0002619!1.70e-15!22;UBERON:0001950!2.67e-15!20;UBERON:0001049!1.03e-14!57;UBERON:0005068!1.03e-14!57;UBERON:0006241!1.03e-14!57;UBERON:0007135!1.03e-14!57;UBERON:0001869!1.97e-14!32;UBERON:0002020!2.19e-14!34;UBERON:0003528!2.19e-14!34;UBERON:0001893!3.58e-13!34;UBERON:0002780!5.21e-13!41;UBERON:0001890!5.21e-13!41;UBERON:0006240!5.21e-13!41;UBERON:0000956!5.61e-13!25;UBERON:0000203!5.61e-13!25;UBERON:0002616!1.02e-12!59;UBERON:0003080!1.63e-12!42;UBERON:0000924!1.68e-12!173;UBERON:0006601!1.68e-12!173;UBERON:0002791!2.46e-12!33;UBERON:0004121!4.03e-12!169;UBERON:0002346!7.80e-11!90;UBERON:0007023!1.10e-10!115;UBERON:0003075!1.66e-10!86;UBERON:0007284!1.66e-10!86;UBERON:0000033!3.46e-09!123;UBERON:0000153!1.25e-08!129;UBERON:0007811!1.25e-08!129;UBERON:0003056!1.50e-08!61;UBERON:0001871!1.77e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.58e-09;5!UBERON:0002410;1.58e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.15e-09,5;UBERON:0002410,1.15e-09,5;UBERON:0001016,1.98e-08,89 | |||
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|short_description=p6@L1CAM | |||
}} |
Revision as of 11:18, 14 September 2013
Short description: | p6@L1CAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_L1CAM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000361981, ENST00000370057, ENST00000538883, ENST00000543994, NM_000425, NM_001143963, NM_024003, uc004fjb.2, uc004fjc.2, uc010nuo.2_5end |
EntrezGene: | L1CAM |
HGNC: | 6470 |
UniProt: | G3XAF4P32004F5H1H0F5H025A4ZYW4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.42e-17 | 10 |
melanoblast | 2.42e-17 | 10 |
light melanocyte | 3.29e-16 | 3 |
pigment cell | 3.26e-12 | 14 |
columnar/cuboidal epithelial cell | 1.73e-10 | 27 |
mast cell | 5.70e-10 | 5 |
basophil mast progenitor cell | 5.70e-10 | 5 |
migratory neural crest cell | 1.18e-09 | 41 |
neurecto-epithelial cell | 2.33e-08 | 20 |
neurectodermal cell | 1.32e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.15e-09 | 5 |
autonomic nervous system | 1.15e-09 | 5 |
nervous system | 1.98e-08 | 89 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 1.14e-10 | 2 |
carcinosarcoma | 1.14e-10 | 2 |
neuroendocrine tumor | 4.03e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.