FFCP PHASE1:Mm9::chr7:106417625..106417639,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1818|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:106417625..106417639,+|id=chr7:106417625..106417639,+|ontology_enrichment_celltype=CL:0000055!1.84e-11!50;CL:0000680!6.41e-08!6;CL:0000183!6.41e-08!6;CL:0000187!6.41e-08!6;CL:0000056!6.41e-08!6;CL:0000393!1.28e-07!39;CL:0000211!1.28e-07!39;CL:0002319!1.99e-07!43;CL:0000221!3.99e-07!44;CL:0000133!3.99e-07!44|ontology_enrichment_celltype_v019_2=CL:0002494,9.63e-20,3;CL:0000737,9.63e-20,3;CL:0000746,9.63e-20,3;CL:0000513,9.63e-20,3;CL:0000217,2.15e-14,2;CL:0000328,2.15e-14,2;CL:0002573,2.15e-14,2;CL:0002376,2.15e-14,2;CL:0000218,2.15e-14,2;CL:0000692,2.15e-14,2;CL:0002377,2.15e-14,2;CL:0002375,2.15e-14,2;CL:0002605,2.26e-13,2;CL:0002604,2.26e-13,2;CL:0000333,1.33e-10,10;CL:0000095,1.33e-10,10;CL:0000243,1.33e-10,10;CL:0000123,1.33e-10,10;CL:0000125,1.33e-10,10;CL:0000030,1.33e-10,10;CL:0000339,1.33e-10,10;CL:0000680,3.57e-10,6;CL:0000187,3.57e-10,6;CL:0000056,3.57e-10,6;CL:0000215,6.72e-10,3;CL:0000222,8.52e-09,7;CL:0000355,5.97e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003975,7.79e-12,5;UBERON:0000010,1.17e-09,11;UBERON:0000011,3.19e-09,3;UBERON:0000996,7.32e-08,1;UBERON:0003134,1.34e-07,8;UBERON:0006834,2.74e-07,1;UBERON:0005795,5.23e-07,4;UBERON:0000995,5.23e-07,4;UBERON:0001134,5.97e-07,9;UBERON:0002036,5.97e-07,9;UBERON:0002385,5.97e-07,9;UBERON:0000486,5.97e-07,9;UBERON:0007503,5.97e-07,9;UBERON:0001015,5.97e-07,9;UBERON:0002329,5.97e-07,9;UBERON:0003082,5.97e-07,9;UBERON:0003059,5.97e-07,9;UBERON:0007282,5.97e-07,9;UBERON:0004290,5.97e-07,9;UBERON:0009618,5.97e-07,9;UBERON:0004175,8.27e-07,9;UBERON:0000474,8.27e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.608261587317087,0.183546752161682,0.782391344348039,0,1.75748946187577,1.1665793944457,0.139986421625363,0,0,0,0,1.54355661621568,1.71920063963254,4.12537673821954,0,0,0,0.338844532069132,0,0,0,0.7104801149461,0,0.768436610643109,0.103689612308478,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0,0.263772575460388,0.365950574409639,0,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,4.61929779332423,4.23200736597999,0,0,0,0,0,0,0,1.36344258062446,0,1.7666978725517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494389935468748,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.374806898238915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0.476087281772027,0.390267295715598,0,0,0.159454768657487,0.491589944147214,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0.477937595905104,1.11399337041197,1.98153571552183,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,1.40803024838226,0.847328283455281,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0.404593039154462,0.247960367176008,0.785267825952089,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,1.12609485270709,0,2.14368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0.412070114477788,0,0,0,0.188626341386076,0,0.128050304809739,0,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0,0|short_description=p@chr7:106417625..106417639,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1818 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:106417625..106417639,+ | |||
|id=chr7:106417625..106417639,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.84e-11!50;CL:0000680!6.41e-08!6;CL:0000183!6.41e-08!6;CL:0000187!6.41e-08!6;CL:0000056!6.41e-08!6;CL:0000393!1.28e-07!39;CL:0000211!1.28e-07!39;CL:0002319!1.99e-07!43;CL:0000221!3.99e-07!44;CL:0000133!3.99e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,9.63e-20,3;CL:0000737,9.63e-20,3;CL:0000746,9.63e-20,3;CL:0000513,9.63e-20,3;CL:0000217,2.15e-14,2;CL:0000328,2.15e-14,2;CL:0002573,2.15e-14,2;CL:0002376,2.15e-14,2;CL:0000218,2.15e-14,2;CL:0000692,2.15e-14,2;CL:0002377,2.15e-14,2;CL:0002375,2.15e-14,2;CL:0002605,2.26e-13,2;CL:0002604,2.26e-13,2;CL:0000333,1.33e-10,10;CL:0000095,1.33e-10,10;CL:0000243,1.33e-10,10;CL:0000123,1.33e-10,10;CL:0000125,1.33e-10,10;CL:0000030,1.33e-10,10;CL:0000339,1.33e-10,10;CL:0000680,3.57e-10,6;CL:0000187,3.57e-10,6;CL:0000056,3.57e-10,6;CL:0000215,6.72e-10,3;CL:0000222,8.52e-09,7;CL:0000355,5.97e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003975,7.79e-12,5;UBERON:0000010,1.17e-09,11;UBERON:0000011,3.19e-09,3;UBERON:0000996,7.32e-08,1;UBERON:0003134,1.34e-07,8;UBERON:0006834,2.74e-07,1;UBERON:0005795,5.23e-07,4;UBERON:0000995,5.23e-07,4;UBERON:0001134,5.97e-07,9;UBERON:0002036,5.97e-07,9;UBERON:0002385,5.97e-07,9;UBERON:0000486,5.97e-07,9;UBERON:0007503,5.97e-07,9;UBERON:0001015,5.97e-07,9;UBERON:0002329,5.97e-07,9;UBERON:0003082,5.97e-07,9;UBERON:0003059,5.97e-07,9;UBERON:0007282,5.97e-07,9;UBERON:0004290,5.97e-07,9;UBERON:0009618,5.97e-07,9;UBERON:0004175,8.27e-07,9;UBERON:0000474,8.27e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.608261587317087,0.183546752161682,0.782391344348039,0,1.75748946187577,1.1665793944457,0.139986421625363,0,0,0,0,1.54355661621568,1.71920063963254,4.12537673821954,0,0,0,0.338844532069132,0,0,0,0.7104801149461,0,0.768436610643109,0.103689612308478,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0,0.263772575460388,0.365950574409639,0,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,4.61929779332423,4.23200736597999,0,0,0,0,0,0,0,1.36344258062446,0,1.7666978725517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494389935468748,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.374806898238915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0.476087281772027,0.390267295715598,0,0,0.159454768657487,0.491589944147214,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0.477937595905104,1.11399337041197,1.98153571552183,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,1.40803024838226,0.847328283455281,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0.404593039154462,0.247960367176008,0.785267825952089,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,1.12609485270709,0,2.14368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0.412070114477788,0,0,0,0.188626341386076,0,0.128050304809739,0,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr7:106417625..106417639,+ | |||
}} |
Revision as of 11:12, 14 September 2013
Short description: | p@chr7:106417625..106417639, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:106417625..106417639, + |
Coexpression cluster: | MCL_coexpression_mm9:1818 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 9.63e-20 | 3 |
striated muscle cell | 9.63e-20 | 3 |
cardiac muscle cell | 9.63e-20 | 3 |
cardiac muscle myoblast | 9.63e-20 | 3 |
insulating cell | 2.15e-14 | 2 |
myelin accumulating cell | 2.15e-14 | 2 |
Schwann cell | 2.15e-14 | 2 |
non-myelinating Schwann cell | 2.15e-14 | 2 |
myelinating Schwann cell;;Schwann cell | 2.15e-14 | 2 |
terminal Schwann cell | 2.15e-14 | 2 |
immature Schwann cell | 2.15e-14 | 2 |
Schwann cell precursor | 2.15e-14 | 2 |
astrocyte of the cerebral cortex | 2.26e-13 | 2 |
astrocyte of the hippocampus | 2.26e-13 | 2 |
migratory neural crest cell | 1.33e-10 | 10 |
neuron associated cell | 1.33e-10 | 10 |
glial cell (sensu Vertebrata) | 1.33e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 1.33e-10 | 10 |
glial cell | 1.33e-10 | 10 |
glioblast | 1.33e-10 | 10 |
glioblast (sensu Vertebrata) | 1.33e-10 | 10 |
muscle precursor cell | 3.57e-10 | 6 |
muscle cell | 3.57e-10 | 6 |
myoblast | 3.57e-10 | 6 |
barrier cell | 6.72e-10 | 3 |
mesodermal cell | 8.52e-09 | 7 |
multi-potent skeletal muscle stem cell | 5.97e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
internal female genitalia | 7.79e-12 | 5 |
peripheral nervous system | 1.17e-09 | 11 |
parasympathetic nervous system | 3.19e-09 | 3 |
vagina | 7.32e-08 | 1 |
female reproductive organ | 1.34e-07 | 8 |
uterus or analog | 2.74e-07 | 1 |
embryonic uterus | 5.23e-07 | 4 |
uterus | 5.23e-07 | 4 |
skeletal muscle tissue | 5.97e-07 | 9 |
striated muscle tissue | 5.97e-07 | 9 |
muscle tissue | 5.97e-07 | 9 |
multilaminar epithelium | 5.97e-07 | 9 |
epithelial vesicle | 5.97e-07 | 9 |
musculature | 5.97e-07 | 9 |
somite | 5.97e-07 | 9 |
myotome | 5.97e-07 | 9 |
presomitic mesoderm | 5.97e-07 | 9 |
presumptive segmental plate | 5.97e-07 | 9 |
dermomyotome | 5.97e-07 | 9 |
trunk paraxial mesoderm | 5.97e-07 | 9 |
internal genitalia | 8.27e-07 | 9 |
female reproductive system | 8.27e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.