FFCP PHASE1:Mm9::chr7:104359935..104359956,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:104359935..104359956,+|id=chr7:104359935..104359956,+|ontology_enrichment_celltype=CL:0000988!7.29e-12!32;CL:0002032!7.29e-12!32;CL:0000037!7.29e-12!32;CL:0000566!7.29e-12!32;CL:0000837!7.29e-12!32;CL:0000049!9.70e-11!19;CL:0002320!3.97e-08!46;CL:0000134!3.97e-08!46;CL:0000553!7.83e-08!6;CL:0000556!7.83e-08!6;CL:0000219!3.74e-07!54|ontology_enrichment_celltype_v019_2=CL:0000049,5.80e-12,19;CL:0000988,4.03e-11,32;CL:0002032,4.03e-11,32;CL:0000037,4.03e-11,32;CL:0000837,4.03e-11,32;CL:0000034,3.55e-09,97;CL:0002320,2.25e-07,46;CL:0000134,2.25e-07,46;CL:0000557,7.08e-07,7|ontology_enrichment_disease=DOID:0060100!2.23e-07!3;DOID:4045!2.23e-07!3|ontology_enrichment_disease_v019_2=DOID:0060100,3.66e-16,3;DOID:4045,3.66e-16,3;DOID:0050686,2.47e-08,6|ontology_enrichment_uberon=UBERON:0002384!3.97e-08!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.25e-07,46;UBERON:0002204,6.06e-07,32|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0.171200729931206,0,0.333109761815663,0.202475267389826,0,0.315462165358238,0.548457734422955,1.27316895539409,0.255129870453209,1.09220046320974,2.87319768052829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.7381253511633,24.2213956802378,15.1821885752402,447.644162391602,111.336414048227,48.0655249500842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,3.23500836165985,5.39912457894067,3.30382590389968,0,0,0,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,3.51106593656617,2.05878325691772,3.40996199274711,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0.291480836629851,0,0.341741761595705,0,0,0,0,0,1.69978429993855,2.6590775941495,1.65839968565309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:104359935..104359956,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:104359935..104359956,+ | |||
|id=chr7:104359935..104359956,+ | |||
|ontology_enrichment_celltype=CL:0000988!7.29e-12!32;CL:0002032!7.29e-12!32;CL:0000037!7.29e-12!32;CL:0000566!7.29e-12!32;CL:0000837!7.29e-12!32;CL:0000049!9.70e-11!19;CL:0002320!3.97e-08!46;CL:0000134!3.97e-08!46;CL:0000553!7.83e-08!6;CL:0000556!7.83e-08!6;CL:0000219!3.74e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,5.80e-12,19;CL:0000988,4.03e-11,32;CL:0002032,4.03e-11,32;CL:0000037,4.03e-11,32;CL:0000837,4.03e-11,32;CL:0000034,3.55e-09,97;CL:0002320,2.25e-07,46;CL:0000134,2.25e-07,46;CL:0000557,7.08e-07,7 | |||
|ontology_enrichment_disease=DOID:0060100!2.23e-07!3;DOID:4045!2.23e-07!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.66e-16,3;DOID:4045,3.66e-16,3;DOID:0050686,2.47e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!3.97e-08!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.25e-07,46;UBERON:0002204,6.06e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0.171200729931206,0,0.333109761815663,0.202475267389826,0,0.315462165358238,0.548457734422955,1.27316895539409,0.255129870453209,1.09220046320974,2.87319768052829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.7381253511633,24.2213956802378,15.1821885752402,447.644162391602,111.336414048227,48.0655249500842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,3.23500836165985,5.39912457894067,3.30382590389968,0,0,0,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,3.51106593656617,2.05878325691772,3.40996199274711,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0.291480836629851,0,0.341741761595705,0,0,0,0,0,1.69978429993855,2.6590775941495,1.65839968565309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:104359935..104359956,+ | |||
}} |
Revision as of 11:09, 14 September 2013
Short description: | p@chr7:104359935..104359956, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:104359935..104359956, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 5.80e-12 | 19 |
hematopoietic cell | 4.03e-11 | 32 |
hematopoietic oligopotent progenitor cell | 4.03e-11 | 32 |
hematopoietic stem cell | 4.03e-11 | 32 |
hematopoietic multipotent progenitor cell | 4.03e-11 | 32 |
stem cell | 3.55e-09 | 97 |
connective tissue cell | 2.25e-07 | 46 |
mesenchymal cell | 2.25e-07 | 46 |
granulocyte monocyte progenitor cell | 7.08e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.25e-07 | 46 |
musculoskeletal system | 6.06e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.66e-16 | 3 |
muscle cancer | 3.66e-16 | 3 |
organ system cancer | 2.47e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.