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FFCP PHASE1:Mm9::chr7:103358694..103358710,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=23966|HGNC=|MCL_coexpression_id=1474|UniProt=D3YVP2|association_with_transcript=38bp_to_ENSMUST00000129445,ENSMUST00000138760_5end|description=CAGE_peak_6_at_Odz4_5end|id=chr7:103358694..103358710,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002609,6.41e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!8.27e-15!49;UBERON:0000033!2.00e-13!63;UBERON:0003080!6.36e-13!40;UBERON:0002346!8.11e-13!71;UBERON:0003075!8.11e-13!71;UBERON:0007284!8.11e-13!71;UBERON:0002780!1.39e-12!39;UBERON:0001890!1.39e-12!39;UBERON:0006240!1.39e-12!39;UBERON:0001049!1.64e-12!52;UBERON:0005068!1.64e-12!52;UBERON:0006241!1.64e-12!52;UBERON:0007135!1.64e-12!52;UBERON:0002020!8.53e-12!34;UBERON:0000955!9.15e-12!50;UBERON:0006238!9.15e-12!50;UBERON:0002791!1.44e-11!29;UBERON:0003528!1.44e-11!29;UBERON:0001893!1.44e-11!29;UBERON:0002616!2.39e-11!49;UBERON:0000956!1.27e-10!21;UBERON:0001869!1.27e-10!21;UBERON:0000203!1.27e-10!21;UBERON:0004121!1.32e-09!102;UBERON:0000924!1.32e-09!102;UBERON:0006601!1.32e-09!102;UBERON:0002619!3.59e-08!17;UBERON:0000468!4.71e-08!333;UBERON:0000153!4.04e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.03e-15,21;UBERON:0001869,1.03e-15,21;UBERON:0000203,1.03e-15,21;UBERON:0002619,2.30e-11,17;UBERON:0003528,4.21e-11,29;UBERON:0002791,4.21e-11,29;UBERON:0001893,4.21e-11,29;UBERON:0002020,5.47e-11,34;UBERON:0003056,7.52e-10,49;UBERON:0003080,2.63e-09,40;UBERON:0002780,8.19e-09,39;UBERON:0001890,8.19e-09,39;UBERON:0006240,8.19e-09,39;UBERON:0000955,8.94e-09,47;UBERON:0006238,8.94e-09,47;UBERON:0010371,2.25e-08,73;UBERON:0000073,2.41e-08,54;UBERON:0002616,3.26e-08,46;UBERON:0001049,3.38e-08,52;UBERON:0005068,3.38e-08,52;UBERON:0006241,3.38e-08,52;UBERON:0007135,3.38e-08,52;UBERON:0002346,3.84e-08,64;UBERON:0003075,3.84e-08,64;UBERON:0007284,3.84e-08,64;UBERON:0002021,4.21e-08,10;UBERON:0000411,4.21e-08,10;UBERON:0001950,4.21e-08,10|phase1_expression=0.960893082628764,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,6.42875596312561,4.99521971827255,5.25812403378455,1.99955689082663,0,1.5923803897944,1.62937300731002,3.67687514644008,0,1.0214987046815,0.307213066512487,0.791317726381163,1.28082701043374,0.52091337055676,0.558365998002762,0.56276261003168,0.763991238884051,0.883885756421003,1.13897344639282,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,5.09610479413291,0,0,0,0,0,0,0.148442139064825,0.346970653532272,0.304465478312141,0.461230994512117,0.60289056221049,0.23517741427141,0.125666591329675,0.247194967734374,2.31358971071859,0,1.61766849947409,0.441683036920787,0,0,1.46390398505774,0,0,0,0,0,1.04853447583376,0.915001205637253,0.753926112677186,1.04294592115366,2.30143911597297,0.20778804455956,0.648965052271031,0.81471491080253,0.248813941220186,0,0.210441855886474,0.780722657776222,0.919608417733892,0.540186389416048,1.20563854268572,2.31324097114515,1.15302348256365,1.03071897015702,0.258703370739016,0.862271971731369,1.51284864134255,1.05570674498369,0.43839146485515,0.278047249225598,1.39300866608867,0.205782136407943,1.39323986772945,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.710234206755631,0.196764231747404,0,0,0.268273401399619,0.350296027101508,0.16455984991348,0,0.0810688095458557,0,0,0,1.47202963994889,2.88132914661996,0,0,0.853153002140936,1.39342003116263,1.15980715189884,0.403367049246685,0.22237804384487,0.570676878337677,0,0.164698954724011,0.251335208800269,0.596869416123452,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0.342745537829186,0,1.01825663922657,0.581857461502877,0.841629838683823,0.379419222745544,0,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.488894929326078,0.678980343100753,0.704070744865506,0.670025029767263,0.714130922658041,0.195133647857799,1.26108115284953,0.664394068946325,0.797273843287435,0,0.172684981865896,0.144649058581512,0,0,0.983528546038072,0.827810238914197,0.80275294993896,0.937693492737625,0.655739781506702,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0,1.28528526568723,0.709700426041343,1.42452482933804,1.79175655288934,0.659880491890142,0,1.21390318077491,0.906970670894253,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,0.727067458955011,0,0,0,0,0.680879211507576,0.540183282093931,0.517434735131018,0.214337035031592,0.886701168211368,0.713475270408282,1.31639216481697,1.522324745573,0,0.21183207086382,0.220528398054962,1.6488625294148,0.645857706783622,1.80938774784468,1.07435109602823,0.656563598980245,0,0.927126510052548,0,0,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,1.82987520414164,0.86404272657441,0.418176592028937,0.655087691238533,0.269728692769641,0.578574190077352,0.26175594198403,0,0,0,1.19613236835183,0.827292452285488,1.16670713006429,1.80823752868824,1.01373675294467,1.29092962510329,0.651021924219751,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0.205421914329655,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,0.453460767230423,0,0,0.167884616364078,0.19318959403219,0.375364950902364,1.28206136987086,0.857473516316263,0,1.12950368523413,1.84130094602871,3.43737308063638,3.26521046453006,2.05524755931193,0.755393897389701,3.37511250115903,2.70192721934532,0.906284817968409,2.07104124700728,0.103787347584177,2.39414924040619,1.36586884603307,0.972426868273176,0.419226325255965,0.367687016900028,1.55572709461131,0.618105171716683,0.320919209591815,2.77966932940177,2.02783439912192,1.32038438970253,1.21733959710847,1.40855335290712,1.32101578597911,2.38146845641537,1.15884325944855,0.578727661391115,1.23625770240992,0.441596760403192,1.71434626192708,1.59728225543404,0.953744759789284,0.436039249896986,0.846984423737976,1.18460451048347,0.914639864363863,1.57841826862706,1.49384525230448,0.561142271657738,1.89816028998679,1.67457620038458,1.22769312950907,0.464810523557898,1.35034627686799,1.49886346762768,1.63752125911786,0.644613162144895,0.382576664137687,0.661774257358546,0|short_description=p6@Odz4}}
|EntrezGene=23966
|HGNC=
|MCL_coexpression_id=1474
|UniProt=D3YVP2
|association_with_transcript=38bp_to_ENSMUST00000129445,ENSMUST00000138760_5end
|description=CAGE_peak_6_at_Odz4_5end
|id=chr7:103358694..103358710,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002609,6.41e-09,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003056!8.27e-15!49;UBERON:0000033!2.00e-13!63;UBERON:0003080!6.36e-13!40;UBERON:0002346!8.11e-13!71;UBERON:0003075!8.11e-13!71;UBERON:0007284!8.11e-13!71;UBERON:0002780!1.39e-12!39;UBERON:0001890!1.39e-12!39;UBERON:0006240!1.39e-12!39;UBERON:0001049!1.64e-12!52;UBERON:0005068!1.64e-12!52;UBERON:0006241!1.64e-12!52;UBERON:0007135!1.64e-12!52;UBERON:0002020!8.53e-12!34;UBERON:0000955!9.15e-12!50;UBERON:0006238!9.15e-12!50;UBERON:0002791!1.44e-11!29;UBERON:0003528!1.44e-11!29;UBERON:0001893!1.44e-11!29;UBERON:0002616!2.39e-11!49;UBERON:0000956!1.27e-10!21;UBERON:0001869!1.27e-10!21;UBERON:0000203!1.27e-10!21;UBERON:0004121!1.32e-09!102;UBERON:0000924!1.32e-09!102;UBERON:0006601!1.32e-09!102;UBERON:0002619!3.59e-08!17;UBERON:0000468!4.71e-08!333;UBERON:0000153!4.04e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.03e-15,21;UBERON:0001869,1.03e-15,21;UBERON:0000203,1.03e-15,21;UBERON:0002619,2.30e-11,17;UBERON:0003528,4.21e-11,29;UBERON:0002791,4.21e-11,29;UBERON:0001893,4.21e-11,29;UBERON:0002020,5.47e-11,34;UBERON:0003056,7.52e-10,49;UBERON:0003080,2.63e-09,40;UBERON:0002780,8.19e-09,39;UBERON:0001890,8.19e-09,39;UBERON:0006240,8.19e-09,39;UBERON:0000955,8.94e-09,47;UBERON:0006238,8.94e-09,47;UBERON:0010371,2.25e-08,73;UBERON:0000073,2.41e-08,54;UBERON:0002616,3.26e-08,46;UBERON:0001049,3.38e-08,52;UBERON:0005068,3.38e-08,52;UBERON:0006241,3.38e-08,52;UBERON:0007135,3.38e-08,52;UBERON:0002346,3.84e-08,64;UBERON:0003075,3.84e-08,64;UBERON:0007284,3.84e-08,64;UBERON:0002021,4.21e-08,10;UBERON:0000411,4.21e-08,10;UBERON:0001950,4.21e-08,10
|phase1_expression=0.960893082628764,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,6.42875596312561,4.99521971827255,5.25812403378455,1.99955689082663,0,1.5923803897944,1.62937300731002,3.67687514644008,0,1.0214987046815,0.307213066512487,0.791317726381163,1.28082701043374,0.52091337055676,0.558365998002762,0.56276261003168,0.763991238884051,0.883885756421003,1.13897344639282,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,5.09610479413291,0,0,0,0,0,0,0.148442139064825,0.346970653532272,0.304465478312141,0.461230994512117,0.60289056221049,0.23517741427141,0.125666591329675,0.247194967734374,2.31358971071859,0,1.61766849947409,0.441683036920787,0,0,1.46390398505774,0,0,0,0,0,1.04853447583376,0.915001205637253,0.753926112677186,1.04294592115366,2.30143911597297,0.20778804455956,0.648965052271031,0.81471491080253,0.248813941220186,0,0.210441855886474,0.780722657776222,0.919608417733892,0.540186389416048,1.20563854268572,2.31324097114515,1.15302348256365,1.03071897015702,0.258703370739016,0.862271971731369,1.51284864134255,1.05570674498369,0.43839146485515,0.278047249225598,1.39300866608867,0.205782136407943,1.39323986772945,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.710234206755631,0.196764231747404,0,0,0.268273401399619,0.350296027101508,0.16455984991348,0,0.0810688095458557,0,0,0,1.47202963994889,2.88132914661996,0,0,0.853153002140936,1.39342003116263,1.15980715189884,0.403367049246685,0.22237804384487,0.570676878337677,0,0.164698954724011,0.251335208800269,0.596869416123452,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0.342745537829186,0,1.01825663922657,0.581857461502877,0.841629838683823,0.379419222745544,0,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.488894929326078,0.678980343100753,0.704070744865506,0.670025029767263,0.714130922658041,0.195133647857799,1.26108115284953,0.664394068946325,0.797273843287435,0,0.172684981865896,0.144649058581512,0,0,0.983528546038072,0.827810238914197,0.80275294993896,0.937693492737625,0.655739781506702,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0,1.28528526568723,0.709700426041343,1.42452482933804,1.79175655288934,0.659880491890142,0,1.21390318077491,0.906970670894253,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,0.727067458955011,0,0,0,0,0.680879211507576,0.540183282093931,0.517434735131018,0.214337035031592,0.886701168211368,0.713475270408282,1.31639216481697,1.522324745573,0,0.21183207086382,0.220528398054962,1.6488625294148,0.645857706783622,1.80938774784468,1.07435109602823,0.656563598980245,0,0.927126510052548,0,0,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,1.82987520414164,0.86404272657441,0.418176592028937,0.655087691238533,0.269728692769641,0.578574190077352,0.26175594198403,0,0,0,1.19613236835183,0.827292452285488,1.16670713006429,1.80823752868824,1.01373675294467,1.29092962510329,0.651021924219751,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0.205421914329655,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,0.453460767230423,0,0,0.167884616364078,0.19318959403219,0.375364950902364,1.28206136987086,0.857473516316263,0,1.12950368523413,1.84130094602871,3.43737308063638,3.26521046453006,2.05524755931193,0.755393897389701,3.37511250115903,2.70192721934532,0.906284817968409,2.07104124700728,0.103787347584177,2.39414924040619,1.36586884603307,0.972426868273176,0.419226325255965,0.367687016900028,1.55572709461131,0.618105171716683,0.320919209591815,2.77966932940177,2.02783439912192,1.32038438970253,1.21733959710847,1.40855335290712,1.32101578597911,2.38146845641537,1.15884325944855,0.578727661391115,1.23625770240992,0.441596760403192,1.71434626192708,1.59728225543404,0.953744759789284,0.436039249896986,0.846984423737976,1.18460451048347,0.914639864363863,1.57841826862706,1.49384525230448,0.561142271657738,1.89816028998679,1.67457620038458,1.22769312950907,0.464810523557898,1.35034627686799,1.49886346762768,1.63752125911786,0.644613162144895,0.382576664137687,0.661774257358546,0
|short_description=p6@Odz4
}}

Revision as of 11:08, 14 September 2013

Short description:p6@Odz4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Odz4_5end
Coexpression cluster:MCL_coexpression_mm9:1474
Association with transcript: 38bp_to_ENSMUST00000129445, ENSMUST00000138760_5end
EntrezGene:Odz4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Odz4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.43
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C62.31
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H31.81
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron of cerebral cortex6.41e-096

Uber anatomy
Ontology termp-valuen
cerebral cortex1.03e-1521
cerebral hemisphere1.03e-1521
pallium1.03e-1521
regional part of cerebral cortex2.30e-1117
brain grey matter4.21e-1129
regional part of telencephalon4.21e-1129
telencephalon4.21e-1129
gray matter5.47e-1134
pre-chordal neural plate7.52e-1049
anterior neural tube2.63e-0940
regional part of forebrain8.19e-0939
forebrain8.19e-0939
future forebrain8.19e-0939
brain8.94e-0947
future brain8.94e-0947
ecto-epithelium2.25e-0873
regional part of nervous system2.41e-0854
regional part of brain3.26e-0846
neural tube3.38e-0852
neural rod3.38e-0852
future spinal cord3.38e-0852
neural keel3.38e-0852
neurectoderm3.84e-0864
neural plate3.84e-0864
presumptive neural plate3.84e-0864
occipital lobe4.21e-0810
visual cortex4.21e-0810
neocortex4.21e-0810







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