FFCP PHASE1:Hg19::chrX:139866190..139866197,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1038|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=1798|TSSclassifier=N|UniProt=P51861|association_with_transcript=385bp_to_M16965_5end|coexpression_cluster_id=C841|description=CAGE_peak_5_at_CDR1_5end|id=chrX:139866190..139866197,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002617;1.14e-13;2|ontology_enrichment_celltype_v019_2=CL:0002617,8.28e-14,2|ontology_enrichment_development_v019=UBERON:0006222;6.72e-26;1!UBERON:0006215;1.01e-09;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.89e-36!57;UBERON:0005068!9.89e-36!57;UBERON:0006241!9.89e-36!57;UBERON:0007135!9.89e-36!57;UBERON:0002616!3.30e-34!59;UBERON:0000073!2.48e-32!94;UBERON:0001016!2.48e-32!94;UBERON:0000955!9.90e-32!69;UBERON:0006238!9.90e-32!69;UBERON:0001017!5.97e-31!82;UBERON:0005743!8.57e-31!86;UBERON:0002780!2.10e-30!41;UBERON:0001890!2.10e-30!41;UBERON:0006240!2.10e-30!41;UBERON:0003080!1.58e-29!42;UBERON:0002020!1.67e-28!34;UBERON:0003528!1.67e-28!34;UBERON:0001893!3.04e-28!34;UBERON:0002346!1.94e-27!90;UBERON:0003075!2.14e-27!86;UBERON:0007284!2.14e-27!86;UBERON:0002791!1.13e-26!33;UBERON:0001869!1.83e-24!32;UBERON:0002619!3.31e-23!22;UBERON:0001950!1.57e-22!20;UBERON:0000956!4.96e-20!25;UBERON:0000203!4.96e-20!25;UBERON:0003056!6.98e-20!61;UBERON:0000153!1.94e-19!129;UBERON:0007811!1.94e-19!129;UBERON:0000924!7.36e-19!173;UBERON:0006601!7.36e-19!173;UBERON:0000033!1.51e-18!123;UBERON:0004121!1.69e-18!169;UBERON:0007023!3.06e-18!115;UBERON:0000025!3.92e-11!194;UBERON:0001871!3.62e-10!7;UBERON:0002308!5.58e-10!9;UBERON:0000125!5.58e-10!9;UBERON:0000200!9.46e-10!6;UBERON:0001872!1.71e-08!5;UBERON:0006331!2.17e-08!3;UBERON:0000475!4.28e-08!365;UBERON:0002771!4.33e-08!3;UBERON:0000483!4.55e-08!309;UBERON:0000988!5.39e-08!3;UBERON:0000477!6.05e-08!286;UBERON:0000119!7.06e-08!312;UBERON:0002298!8.25e-08!8;UBERON:0004111!1.38e-07!241;UBERON:0003076!1.50e-07!15;UBERON:0003057!1.50e-07!15;UBERON:0004733!3.11e-07!12;UBERON:0002028!3.11e-07!12;UBERON:0007277!3.11e-07!12;UBERON:0002680!4.95e-07!9;UBERON:0001895!4.95e-07!9;UBERON:0010092!4.95e-07!9;UBERON:0002420!5.01e-07!9;UBERON:0007245!5.01e-07!9;UBERON:0010009!5.01e-07!9;UBERON:0010011!5.01e-07!9;UBERON:0000454!5.01e-07!9|ontology_enrichment_uberon_v019=UBERON:0002038;6.72e-26;1!UBERON:0009661;6.72e-26;1!UBERON:0002950;6.72e-26;1!UBERON:0001891;6.72e-26;1!UBERON:0000073;9.58e-11;53!UBERON:0002616;9.58e-11;53!UBERON:0002780;5.05e-07;41!UBERON:0001890;5.05e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.26e-25,1;UBERON:0009661,1.26e-25,1;UBERON:0002950,1.26e-25,1;UBERON:0001891,1.26e-25,1;UBERON:0009616,1.26e-25,1;UBERON:0010286,1.26e-25,1;UBERON:0000073,1.03e-11,53;UBERON:0002616,1.03e-11,53;UBERON:0001049,4.14e-11,56;UBERON:0005068,4.14e-11,56;UBERON:0006241,4.14e-11,56;UBERON:0007135,4.14e-11,56;UBERON:0002780,7.75e-10,41;UBERON:0001890,7.75e-10,41;UBERON:0003080,7.75e-10,41;UBERON:0006240,7.75e-10,41;UBERON:0000955,4.37e-09,68;UBERON:0006238,4.37e-09,68;UBERON:0001017,1.09e-07,81;UBERON:0003075,1.09e-07,82;UBERON:0007284,1.09e-07,82;UBERON:0002791,2.12e-07,32;UBERON:0002346,2.42e-07,86;UBERON:0003528,5.19e-07,34;UBERON:0002020,5.19e-07,34;UBERON:0001893,5.19e-07,34;UBERON:0001016,5.97e-07,89;UBERON:0003056,8.79e-07,61|phase1_expression=0,1.92690471501885,0,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877955241761676,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.321707842287215,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0.995213339381022,7.68423809279223,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1038 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1798 | |||
|TSSclassifier=N | |||
|UniProt=P51861 | |||
|association_with_transcript=385bp_to_M16965_5end | |||
|coexpression_cluster_id=C841 | |||
|description=CAGE_peak_5_at_CDR1_5end | |||
|id=chrX:139866190..139866197,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002617;1.14e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,8.28e-14,2 | |||
|ontology_enrichment_development_v019=UBERON:0006222;6.72e-26;1!UBERON:0006215;1.01e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.89e-36!57;UBERON:0005068!9.89e-36!57;UBERON:0006241!9.89e-36!57;UBERON:0007135!9.89e-36!57;UBERON:0002616!3.30e-34!59;UBERON:0000073!2.48e-32!94;UBERON:0001016!2.48e-32!94;UBERON:0000955!9.90e-32!69;UBERON:0006238!9.90e-32!69;UBERON:0001017!5.97e-31!82;UBERON:0005743!8.57e-31!86;UBERON:0002780!2.10e-30!41;UBERON:0001890!2.10e-30!41;UBERON:0006240!2.10e-30!41;UBERON:0003080!1.58e-29!42;UBERON:0002020!1.67e-28!34;UBERON:0003528!1.67e-28!34;UBERON:0001893!3.04e-28!34;UBERON:0002346!1.94e-27!90;UBERON:0003075!2.14e-27!86;UBERON:0007284!2.14e-27!86;UBERON:0002791!1.13e-26!33;UBERON:0001869!1.83e-24!32;UBERON:0002619!3.31e-23!22;UBERON:0001950!1.57e-22!20;UBERON:0000956!4.96e-20!25;UBERON:0000203!4.96e-20!25;UBERON:0003056!6.98e-20!61;UBERON:0000153!1.94e-19!129;UBERON:0007811!1.94e-19!129;UBERON:0000924!7.36e-19!173;UBERON:0006601!7.36e-19!173;UBERON:0000033!1.51e-18!123;UBERON:0004121!1.69e-18!169;UBERON:0007023!3.06e-18!115;UBERON:0000025!3.92e-11!194;UBERON:0001871!3.62e-10!7;UBERON:0002308!5.58e-10!9;UBERON:0000125!5.58e-10!9;UBERON:0000200!9.46e-10!6;UBERON:0001872!1.71e-08!5;UBERON:0006331!2.17e-08!3;UBERON:0000475!4.28e-08!365;UBERON:0002771!4.33e-08!3;UBERON:0000483!4.55e-08!309;UBERON:0000988!5.39e-08!3;UBERON:0000477!6.05e-08!286;UBERON:0000119!7.06e-08!312;UBERON:0002298!8.25e-08!8;UBERON:0004111!1.38e-07!241;UBERON:0003076!1.50e-07!15;UBERON:0003057!1.50e-07!15;UBERON:0004733!3.11e-07!12;UBERON:0002028!3.11e-07!12;UBERON:0007277!3.11e-07!12;UBERON:0002680!4.95e-07!9;UBERON:0001895!4.95e-07!9;UBERON:0010092!4.95e-07!9;UBERON:0002420!5.01e-07!9;UBERON:0007245!5.01e-07!9;UBERON:0010009!5.01e-07!9;UBERON:0010011!5.01e-07!9;UBERON:0000454!5.01e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;6.72e-26;1!UBERON:0009661;6.72e-26;1!UBERON:0002950;6.72e-26;1!UBERON:0001891;6.72e-26;1!UBERON:0000073;9.58e-11;53!UBERON:0002616;9.58e-11;53!UBERON:0002780;5.05e-07;41!UBERON:0001890;5.05e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.26e-25,1;UBERON:0009661,1.26e-25,1;UBERON:0002950,1.26e-25,1;UBERON:0001891,1.26e-25,1;UBERON:0009616,1.26e-25,1;UBERON:0010286,1.26e-25,1;UBERON:0000073,1.03e-11,53;UBERON:0002616,1.03e-11,53;UBERON:0001049,4.14e-11,56;UBERON:0005068,4.14e-11,56;UBERON:0006241,4.14e-11,56;UBERON:0007135,4.14e-11,56;UBERON:0002780,7.75e-10,41;UBERON:0001890,7.75e-10,41;UBERON:0003080,7.75e-10,41;UBERON:0006240,7.75e-10,41;UBERON:0000955,4.37e-09,68;UBERON:0006238,4.37e-09,68;UBERON:0001017,1.09e-07,81;UBERON:0003075,1.09e-07,82;UBERON:0007284,1.09e-07,82;UBERON:0002791,2.12e-07,32;UBERON:0002346,2.42e-07,86;UBERON:0003528,5.19e-07,34;UBERON:0002020,5.19e-07,34;UBERON:0001893,5.19e-07,34;UBERON:0001016,5.97e-07,89;UBERON:0003056,8.79e-07,61 | |||
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|short_description=p5@CDR1 | |||
}} |
Revision as of 11:04, 14 September 2013
Short description: | p5@CDR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_CDR1_5end |
Coexpression cluster: | C841_cerebellum_occipital_medial_parietal_middle_caudate_globus |
Association with transcript: | 385bp_to_M16965_5end |
EntrezGene: | CDR1 |
HGNC: | 1798 |
UniProt: | P51861 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 8.28e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 1.26e-25 | 1 |
midbrain nucleus | 1.26e-25 | 1 |
regional part of midbrain | 1.26e-25 | 1 |
midbrain | 1.26e-25 | 1 |
presumptive midbrain | 1.26e-25 | 1 |
midbrain neural tube | 1.26e-25 | 1 |
regional part of nervous system | 1.03e-11 | 53 |
regional part of brain | 1.03e-11 | 53 |
neural tube | 4.14e-11 | 56 |
neural rod | 4.14e-11 | 56 |
future spinal cord | 4.14e-11 | 56 |
neural keel | 4.14e-11 | 56 |
regional part of forebrain | 7.75e-10 | 41 |
forebrain | 7.75e-10 | 41 |
anterior neural tube | 7.75e-10 | 41 |
future forebrain | 7.75e-10 | 41 |
brain | 4.37e-09 | 68 |
future brain | 4.37e-09 | 68 |
central nervous system | 1.09e-07 | 81 |
neural plate | 1.09e-07 | 82 |
presumptive neural plate | 1.09e-07 | 82 |
regional part of telencephalon | 2.12e-07 | 32 |
neurectoderm | 2.42e-07 | 86 |
brain grey matter | 5.19e-07 | 34 |
gray matter | 5.19e-07 | 34 |
telencephalon | 5.19e-07 | 34 |
nervous system | 5.97e-07 | 89 |
pre-chordal neural plate | 8.79e-07 | 61 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.