FFCP PHASE1:Mm9::chr6:83725761..83725820,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=21766|HGNC=|UniProt=Q62302|association_with_transcript=0bp_to_ENSMUST00000014892,ENSMUST00000125614,NM_009357,uc009cof.2,uc009cog.2_5end|description=CAGE_peak_1_at_Tex261_5end|id=chr6:83725761..83725820,-|ontology_enrichment_celltype=CL:0000219!1.72e-07!54|ontology_enrichment_celltype_v019_2=CL:0000219,1.72e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005256!2.20e-09!47;UBERON:0000480!4.53e-08!308;UBERON:0000467!4.53e-08!308;UBERON:0002100!7.38e-08!98;UBERON:0000923!4.77e-07!314;UBERON:0005291!4.77e-07!314;UBERON:0006598!4.77e-07!314;UBERON:0002532!4.77e-07!314|ontology_enrichment_uberon_v019_2=UBERON:0005256,5.50e-10,45;UBERON:0002100,1.34e-07,90;UBERON:0003104,8.66e-07,61;UBERON:0009142,8.66e-07,61|phase1_expression=22.5809874417759,12.2141392673776,16.3799726180233,16.3330674105688,15.5277676283368,16.6200479192771,14.0167584357315,31.376967596303,14.2196609373183,14.0438715793196,26.5387850749533,29.3561545102838,29.7889270080298,27.0129043474702,32.9778664197506,24.2970320867791,30.7807226376385,25.236973228659,23.9950258810043,20.7950929381035,23.7270779521485,23.9291192394134,19.8511839745591,22.5589316138703,27.2997044469932,19.5238867799107,15.9381938578858,21.331652035903,34.7742857605164,33.0159469985509,26.6076612786366,19.0509202037889,23.9875267157982,31.6963362030877,28.3074587356249,39.7300802406797,27.3586937391575,41.016099812217,33.5974198145234,25.1291397107423,38.2350467220159,32.1031377930469,36.4132764773365,37.1395613027953,36.2929413765862,31.5700413718092,83.7158738452402,44.6951570579915,44.5962950950978,53.8570820435765,35.5565510928421,38.8131923785423,19.7983475148129,44.9724528047034,27.2235977305396,38.0743965333202,38.1089475118546,41.7694394744728,22.0524942336962,20.6306481916093,23.4517619297286,52.1820579386463,62.2506357277798,94.4894703145469,90.9757053561617,98.7567359775079,70.1064258613067,77.612097674954,22.7080250955566,24.8410926530311,25.86997024622,34.5637691128602,35.3389665522582,19.7210186736076,20.7026217399391,25.7381260250806,19.82085857989,23.6221575457597,23.5017995882053,22.0250100509424,19.0294298693012,19.2737947106001,27.3599339021353,24.1987922313622,22.1557459276375,22.0971439105251,28.3319644790215,23.6727296198132,33.4709774532674,31.4377690044228,27.5371264266594,72.2756056664365,40.798280022465,45.8747712892145,88.369592772883,82.8849741130071,30.0551059081949,28.4618638705356,33.2526085891672,32.5072408549513,22.8166340038222,16.6824420638613,12.7402619853323,14.2213340630666,45.2466275713438,46.1114955164679,53.585591171567,25.9197406962266,12.9468941823586,63.8301197978747,28.7985642431786,35.9269264408327,44.9700219649314,47.4776317740761,29.2795880767905,41.7213083214523,36.337660256953,33.1132527346598,35.384422077995,22.4855921426899,22.5258348829601,20.8496358848145,61.5092812019803,32.4986684682817,38.1193006400488,59.0105797531846,25.1611761462433,25.7958174327165,22.7455706460786,24.4158742229861,25.6200337578431,22.240820323977,25.7259993884569,17.1329356411321,26.3890816590641,18.4955039897244,26.3763952372319,24.6325801807984,42.2047006584237,96.1719281401186,18.4771029007039,24.1397209655147,23.0479526150847,19.7423311364787,19.7986212530364,18.3202620007335,20.9891863013793,26.9051505568576,21.7723672862171,19.856138417621,21.8179393963297,25.4267049615987,16.4047877043103,18.4573648256748,18.108828003899,20.6995637491233,26.6841011179029,26.2494865257009,33.5312929286799,16.5700618028402,18.2930326785255,18.1862682075625,17.7558551688908,20.8570085652248,28.6936829970524,29.7643449280522,29.2418007525585,28.257212852855,30.1144525341669,28.0726363575253,34.292106437897,42.690396328197,35.5671186771502,39.0540678592682,23.9730541363105,16.7734518178234,76.3267388692573,46.5432997327838,20.4756720513825,17.8822237332538,17.0105048945163,19.9666689377109,24.6839628667806,30.4361001780095,59.7906617546085,32.4456940806301,28.903549012031,22.6810378126912,27.8798644580342,44.0421510240569,57.276583216794,46.5990579415219,22.0014765105575,17.0230283788496,23.6686244913469,21.1797380959127,17.8436288194216,20.4095235880827,22.7019168276084,31.5885716676349,34.2257226694197,31.5896739639809,65.8124832133471,19.6877224744991,24.7664333842636,23.1607975756399,23.1260538382893,26.2883104130134,25.462585178142,27.0434369203762,42.1551589615092,38.4385978463314,21.5652309791032,36.8419538191818,36.8204454275182,42.4332514951148,41.9789947641274,60.7878836917843,37.1353912234875,17.0542270593436,18.0891123850649,20.5391553787978,19.4792906079457,23.1158635269706,21.4239276797412,26.3430424608028,19.2314875809553,25.9113686889067,22.1642128433907,26.0542670398023,34.3643113913132,30.6656004192805,46.7452980211744,40.7929262864032,42.7834917526562,31.1808523324348,25.3669932180711,20.5120451536356,24.4263068611246,35.5984007358166,26.5026904309656,23.0358859135017,26.0662311256687,25.5696613809231,26.2902435417225,24.0615051170508,35.2185310457158,24.5494920645502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| ||
|EntrezGene=21766 | |||
|HGNC= | |||
|UniProt=Q62302 | |||
|association_with_transcript=0bp_to_ENSMUST00000014892,ENSMUST00000125614,NM_009357,uc009cof.2,uc009cog.2_5end | |||
|description=CAGE_peak_1_at_Tex261_5end | |||
|id=chr6:83725761..83725820,- | |||
|ontology_enrichment_celltype=CL:0000219!1.72e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,1.72e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.20e-09!47;UBERON:0000480!4.53e-08!308;UBERON:0000467!4.53e-08!308;UBERON:0002100!7.38e-08!98;UBERON:0000923!4.77e-07!314;UBERON:0005291!4.77e-07!314;UBERON:0006598!4.77e-07!314;UBERON:0002532!4.77e-07!314 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,5.50e-10,45;UBERON:0002100,1.34e-07,90;UBERON:0003104,8.66e-07,61;UBERON:0009142,8.66e-07,61 | |||
|phase1_expression=22.5809874417759,12.2141392673776,16.3799726180233,16.3330674105688,15.5277676283368,16.6200479192771,14.0167584357315,31.376967596303,14.2196609373183,14.0438715793196,26.5387850749533,29.3561545102838,29.7889270080298,27.0129043474702,32.9778664197506,24.2970320867791,30.7807226376385,25.236973228659,23.9950258810043,20.7950929381035,23.7270779521485,23.9291192394134,19.8511839745591,22.5589316138703,27.2997044469932,19.5238867799107,15.9381938578858,21.331652035903,34.7742857605164,33.0159469985509,26.6076612786366,19.0509202037889,23.9875267157982,31.6963362030877,28.3074587356249,39.7300802406797,27.3586937391575,41.016099812217,33.5974198145234,25.1291397107423,38.2350467220159,32.1031377930469,36.4132764773365,37.1395613027953,36.2929413765862,31.5700413718092,83.7158738452402,44.6951570579915,44.5962950950978,53.8570820435765,35.5565510928421,38.8131923785423,19.7983475148129,44.9724528047034,27.2235977305396,38.0743965333202,38.1089475118546,41.7694394744728,22.0524942336962,20.6306481916093,23.4517619297286,52.1820579386463,62.2506357277798,94.4894703145469,90.9757053561617,98.7567359775079,70.1064258613067,77.612097674954,22.7080250955566,24.8410926530311,25.86997024622,34.5637691128602,35.3389665522582,19.7210186736076,20.7026217399391,25.7381260250806,19.82085857989,23.6221575457597,23.5017995882053,22.0250100509424,19.0294298693012,19.2737947106001,27.3599339021353,24.1987922313622,22.1557459276375,22.0971439105251,28.3319644790215,23.6727296198132,33.4709774532674,31.4377690044228,27.5371264266594,72.2756056664365,40.798280022465,45.8747712892145,88.369592772883,82.8849741130071,30.0551059081949,28.4618638705356,33.2526085891672,32.5072408549513,22.8166340038222,16.6824420638613,12.7402619853323,14.2213340630666,45.2466275713438,46.1114955164679,53.585591171567,25.9197406962266,12.9468941823586,63.8301197978747,28.7985642431786,35.9269264408327,44.9700219649314,47.4776317740761,29.2795880767905,41.7213083214523,36.337660256953,33.1132527346598,35.384422077995,22.4855921426899,22.5258348829601,20.8496358848145,61.5092812019803,32.4986684682817,38.1193006400488,59.0105797531846,25.1611761462433,25.7958174327165,22.7455706460786,24.4158742229861,25.6200337578431,22.240820323977,25.7259993884569,17.1329356411321,26.3890816590641,18.4955039897244,26.3763952372319,24.6325801807984,42.2047006584237,96.1719281401186,18.4771029007039,24.1397209655147,23.0479526150847,19.7423311364787,19.7986212530364,18.3202620007335,20.9891863013793,26.9051505568576,21.7723672862171,19.856138417621,21.8179393963297,25.4267049615987,16.4047877043103,18.4573648256748,18.108828003899,20.6995637491233,26.6841011179029,26.2494865257009,33.5312929286799,16.5700618028402,18.2930326785255,18.1862682075625,17.7558551688908,20.8570085652248,28.6936829970524,29.7643449280522,29.2418007525585,28.257212852855,30.1144525341669,28.0726363575253,34.292106437897,42.690396328197,35.5671186771502,39.0540678592682,23.9730541363105,16.7734518178234,76.3267388692573,46.5432997327838,20.4756720513825,17.8822237332538,17.0105048945163,19.9666689377109,24.6839628667806,30.4361001780095,59.7906617546085,32.4456940806301,28.903549012031,22.6810378126912,27.8798644580342,44.0421510240569,57.276583216794,46.5990579415219,22.0014765105575,17.0230283788496,23.6686244913469,21.1797380959127,17.8436288194216,20.4095235880827,22.7019168276084,31.5885716676349,34.2257226694197,31.5896739639809,65.8124832133471,19.6877224744991,24.7664333842636,23.1607975756399,23.1260538382893,26.2883104130134,25.462585178142,27.0434369203762,42.1551589615092,38.4385978463314,21.5652309791032,36.8419538191818,36.8204454275182,42.4332514951148,41.9789947641274,60.7878836917843,37.1353912234875,17.0542270593436,18.0891123850649,20.5391553787978,19.4792906079457,23.1158635269706,21.4239276797412,26.3430424608028,19.2314875809553,25.9113686889067,22.1642128433907,26.0542670398023,34.3643113913132,30.6656004192805,46.7452980211744,40.7929262864032,42.7834917526562,31.1808523324348,25.3669932180711,20.5120451536356,24.4263068611246,35.5984007358166,26.5026904309656,23.0358859135017,26.0662311256687,25.5696613809231,26.2902435417225,24.0615051170508,35.2185310457158,24.5494920645502,28.0654322342032,25.7057053137446,28.9557773824868,27.7782341720918,28.0165570088151,29.5296520120838,66.3725691699814,21.6074766177933,25.9998258989686,26.7819213253375,36.0268309314543,29.2063390546731,29.202397128009,33.081569382453,25.6678112436999,36.9763006784905,37.9506990869996,47.442349894166,30.9800041235947,18.7263537792563,22.8964870295475,19.7190072229065,17.3793428969428,19.9773075714319,21.0622746370715,37.1447237919811,21.8244688499251,33.8931313382112,37.4898276693435,25.3924829529879,20.6674466170759,17.0685577546681,21.845138952574,16.5782308742512,41.098797964809,35.0453820799863,31.6111129476027,24.9728110235499,19.0750363190803,21.0972671845254,18.8638034255015,23.5641518402718,18.8676057293179,20.852766396225,20.1771961754459,33.413471630529,17.8729836373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| |||
|short_description=p1@Tex261 | |||
}} | |||
Revision as of 10:45, 14 September 2013
| Short description: | p1@Tex261 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Tex261_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000014892, ENSMUST00000125614, NM_009357, uc009cof.2, uc009cog.2_5end |
| EntrezGene: | Tex261 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| motile cell | 1.72e-07 | 54 |
| Ontology term | p-value | n |
|---|---|---|
| trunk mesenchyme | 5.50e-10 | 45 |
| trunk | 1.34e-07 | 90 |
| mesenchyme | 8.66e-07 | 61 |
| entire embryonic mesenchyme | 8.66e-07 | 61 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
