FFCP PHASE1:Mm9::chr6:72283460..72283465,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=28035|HGNC=|UniProt=|association_with_transcript=-98bp_to_ENSMUST00000154799_5end|description=CAGE_peak_6_at_Usp39_5end|id=chr6:72283460..72283465,-|ontology_enrichment_celltype=CL:0000107!1.53e-26!9;CL:0000630!9.95e-10!3;CL:0000221!1.24e-07!44;CL:0000133!1.24e-07!44;CL:0000325!2.74e-07!2;CL:0000217!2.74e-07!2;CL:0000328!2.74e-07!2;CL:0002573!2.74e-07!2;CL:0002376!2.74e-07!2;CL:0000218!2.74e-07!2;CL:0000692!2.74e-07!2;CL:0002377!2.74e-07!2;CL:0002375!2.74e-07!2|ontology_enrichment_celltype_v019_2=CL:0000107,6.62e-14,9;CL:0002494,4.56e-11,3;CL:0000737,4.56e-11,3;CL:0000746,4.56e-11,3;CL:0000513,4.56e-11,3;CL:0000393,1.01e-07,39;CL:0000211,1.01e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!2.63e-32!11;UBERON:0002410!1.53e-26!9;UBERON:0000011!3.87e-10!3;UBERON:0002005!8.14e-10!3;UBERON:0005428!8.14e-10!3;UBERON:0000013!8.71e-10!3|ontology_enrichment_uberon_v019_2=UBERON:0000011,4.15e-39,3;UBERON:0002410,6.62e-14,9;UBERON:0000010,1.36e-11,11|phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0.57423196411502,0,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05807548828758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757261933331841,0.906858721281426,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631016438832513,0.390438744296638,0.861693590931196,1.91175038362042,1.11399337041197,0.566153061577665,0.809621403349789,0.584511715822624,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330916980914195,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0.309873682371932,0,0,0,0.214871054048298,0,0,0|short_description=p6@Usp39}} | ||
|EntrezGene=28035 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=-98bp_to_ENSMUST00000154799_5end | |||
|description=CAGE_peak_6_at_Usp39_5end | |||
|id=chr6:72283460..72283465,- | |||
|ontology_enrichment_celltype=CL:0000107!1.53e-26!9;CL:0000630!9.95e-10!3;CL:0000221!1.24e-07!44;CL:0000133!1.24e-07!44;CL:0000325!2.74e-07!2;CL:0000217!2.74e-07!2;CL:0000328!2.74e-07!2;CL:0002573!2.74e-07!2;CL:0002376!2.74e-07!2;CL:0000218!2.74e-07!2;CL:0000692!2.74e-07!2;CL:0002377!2.74e-07!2;CL:0002375!2.74e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,6.62e-14,9;CL:0002494,4.56e-11,3;CL:0000737,4.56e-11,3;CL:0000746,4.56e-11,3;CL:0000513,4.56e-11,3;CL:0000393,1.01e-07,39;CL:0000211,1.01e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!2.63e-32!11;UBERON:0002410!1.53e-26!9;UBERON:0000011!3.87e-10!3;UBERON:0002005!8.14e-10!3;UBERON:0005428!8.14e-10!3;UBERON:0000013!8.71e-10!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000011,4.15e-39,3;UBERON:0002410,6.62e-14,9;UBERON:0000010,1.36e-11,11 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0.57423196411502,0,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05807548828758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757261933331841,0.906858721281426,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631016438832513,0.390438744296638,0.861693590931196,1.91175038362042,1.11399337041197,0.566153061577665,0.809621403349789,0.584511715822624,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330916980914195,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0.309873682371932,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p6@Usp39 | |||
}} |
Revision as of 10:35, 14 September 2013
Short description: | p6@Usp39 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Usp39_5end |
Coexpression cluster: | NA |
Association with transcript: | -98bp_to_ENSMUST00000154799_5end |
EntrezGene: | Usp39 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 6.62e-14 | 9 |
cardiocyte | 4.56e-11 | 3 |
striated muscle cell | 4.56e-11 | 3 |
cardiac muscle cell | 4.56e-11 | 3 |
cardiac muscle myoblast | 4.56e-11 | 3 |
electrically responsive cell | 1.01e-07 | 39 |
electrically active cell | 1.01e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
parasympathetic nervous system | 4.15e-39 | 3 |
autonomic nervous system | 6.62e-14 | 9 |
peripheral nervous system | 1.36e-11 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.