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FFCP PHASE1:Mm9::chr6:72047757..72047779,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20454|HGNC=|MCL_coexpression_id=3574|UniProt=O88829|association_with_transcript=150bp_to_ENSMUST00000114112,NM_011375,uc009chz.1_5end|description=CAGE_peak_3_at_St3gal5_5end|id=chr6:72047757..72047779,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!1.47e-09!114;UBERON:0004111!1.42e-08!122;UBERON:0002021!5.51e-08!10;UBERON:0000411!5.51e-08!10;UBERON:0001950!5.51e-08!10;UBERON:0000468!7.59e-08!333;UBERON:0002346!9.47e-08!71;UBERON:0003075!9.47e-08!71;UBERON:0007284!9.47e-08!71|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.50e-09,10;UBERON:0000411,4.50e-09,10;UBERON:0001950,4.50e-09,10;UBERON:0002619,2.53e-07,17;UBERON:0000025,3.59e-07,114;UBERON:0000956,4.14e-07,21;UBERON:0001869,4.14e-07,21;UBERON:0000203,4.14e-07,21;UBERON:0004111,9.01e-07,122|phase1_expression=4.16387002472464,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.01237633694913,1.39912375625629,0.157731082679119,0.137114433605739,0,0.850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,0,0.755380907853464,0.202753862439029,2.9367480345869,1.56478268869608,1.74420125104357,6.81027166476863,1.94429899074283,1.81982348112971,0,0,0,0,0.771778308107841,1.14613375975503,7.73508138416164,0.404632921719196,0,0.633831403506179,0.338844532069132,1.77858959222228,0,0,0,2.39680088414724,2.30530983192933,1.03689612308478,0.945041568321835,1.47227472945967,2.28520787523043,1.98781686856452,0.244981598429908,0.191690942036473,0,0,1.53224805702225,1.0752457327937,0.659431438650969,0.365950574409639,0,0.279182999001381,1.12552522006336,1.68078072554491,2.65165726926301,3.55929201997757,0.559198337475902,0.302904773332736,0.302286240427142,8.11620568364698,1.72084775396277,2.03991400112325,2.15881276655127,1.29955283489534,2.24013443548668,1.54488862144927,0.340860645156116,0.259786004602869,0.35333957451034,5.49289337129054,0,0,0,0.216491041011214,0.253359865475099,1.51657333504435,1.25602267690966,0,21.3756680253348,2.4287945747259,3.04465478312141,1.61430848079241,4.37095657602605,4.35078216402108,10.9329934456818,1.23597483867187,0.578397427679647,0.884610551949874,0.970601099684455,0.662524555381181,0,1.86391761218122,1.75668478206928,2.30391377494801,0.255457055208591,0,0,0,0.898743836428936,2.74500361691176,0.251308704225729,11.9938780932671,11.2514801225345,1.24672826735736,2.43361894601636,1.2220723662038,0.497627882440372,0,0.631325567659422,0.520481771850815,0.689706313300419,0.720248519221397,1.9591626318643,1.02054748726992,0.768682321709099,1.40552586839593,0.776110112217047,0.215567992932842,0.756424320671277,1.23165786914764,0.876782929710299,0.834141747676794,1.0447564995665,0.61734640922383,2.7864797354589,0,0,0,1.03562886267751,3.04883877975425,2.88099298337624,2.84093682702252,1.18058539048442,0.462801338662135,1.16266972375204,0.536546802799238,0.817357396570186,0.658239399653922,0.492502392237286,0.56748166682099,0.292399974850665,1.3173006917463,0.805238512562231,4.6263788684108,1.54356918568927,0,0,1.06644125267617,0.464473343720877,0.515469845288373,1.00841762311671,0.889512175379481,0.570676878337677,0,1.64698954724011,4.52403375840485,5.37182474511107,3.8992817423824,0,0,0.199141273254367,1.70701110857774,0.685491075658373,0,0.610953983535943,0,0.350679099451593,0.189709611372772,0,0.156998727841375,0.246794327843601,1.77871576252289,1.00107063429656,1.37591296579242,0.224862112384854,1.62288097110802,4.3411888755435,2.5462585178142,11.5078454980324,7.29608520487659,4.11842119782122,5.75072826109418,1.11642284300551,2.49630138491648,2.77836765741823,1.07638448113147,1.4473305640901,0.739012760666419,1.89491411770485,2.77040459951444,2.37643120085263,2.58159273117352,1.67506257441816,1.42826184531608,0.975668239288994,0.630540576424764,0.44292937929755,0.637819074629948,0.491589944147214,0.172684981865896,0.433947175744535,1.50791283939272,2.17562273527484,0,0.275936746304732,0.321101179975584,0.234423373184406,1.80328439914343,1.76729649043061,0.94652465824877,1.17131623288992,1.50796378412959,1.67278158566786,3.34198011123591,2.54768877709949,2.83367491172426,1.16902343164525,0.790575555893047,1.92792789853084,13.3423680095772,3.20518086601059,3.4206261464251,1.15479086080775,0,0.728341908464944,0.906970670894253,0.377210159511796,0.885905678642318,0.922305443831782,2.32585463851399,1.45413491791002,2.13898427030833,0.948110273807448,1.05418608574999,0,2.7235168460303,0.900305470156551,2.06973894052407,3.00071849044229,1.41872186913819,0.891844088010353,0.822745103010605,0.304464949114599,0.23467170806371,0.63549621259146,0,0.32977250588296,0.968786560175433,0.180938774784468,0.716234064018819,2.79039529566604,0.582961673259701,0.556275906031529,1.87957968877638,0.82554747185289,2.03713980106683,2.44878994106098,0.546776910884101,2.28778173206523,0,0.279902904647316,0.276399947608848,0,2.05618395827738,1.82987520414164,0.86404272657441,1.67270636811575,0.655087691238533,0.539457385539283,0.826534557253359,0.523511883968059,1.68499465279331,0,0,5.08356256549528,4.79829622325583,5.44463327363333,3.09983576346555,5.23763989021412,5.39843297770468,5.33837977860195,2.62148361064277,0.966336483304024,0.576060012515731,0,0.608175645870493,0.616265742988964,0.129920822977795,0.179026695667481,0,0,0,0,0,0.100826185136841,0,0,0,0,0.443971906748129,0.0897138566094757,0.503653849092235,1.15913756419314,0.187682475451182,1.09890974560359,0.643105137237198,0,6.7770221114048,9.66682996665071,6.87474616127276,7.73339320546594,16.4419804744954,15.8632718451837,15.5255175053315,17.1122057225204,16.7662691324156,12.4262474820437,0.518936737920883,2.39414924040619,1.02440163452481,2.18796045361465,0.628839487883947,0.919217542250071,1.11123363900808,2.06035057238894,1.60459604795908,2.52697211763797,1.2673964994512,1.32038438970253,1.591905626988,1.28050304809739,1.55075766180156,1.42888107384922,1.39061191133827,1.73618298417335,0.824171801606613,1.61918812147837,1.37147700954166,1.24233064311536,2.38436189947321,2.0348498328526,1.88218760830661,2.19997980518359,1.64635175585495,2.36762740294059,1.49384525230448,3.36685362994643,1.77952527186261,1.67457620038458,2.04615521584845,2.32405261778949,1.54325288784913,0.499621155875892,2.8071793013449,0.859484216193193,1.14772999241306,0.441182838239031,0.695603506861264|short_description=p3@St3gal5}}
|EntrezGene=20454
|HGNC=
|MCL_coexpression_id=3574
|UniProt=O88829
|association_with_transcript=150bp_to_ENSMUST00000114112,NM_011375,uc009chz.1_5end
|description=CAGE_peak_3_at_St3gal5_5end
|id=chr6:72047757..72047779,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000025!1.47e-09!114;UBERON:0004111!1.42e-08!122;UBERON:0002021!5.51e-08!10;UBERON:0000411!5.51e-08!10;UBERON:0001950!5.51e-08!10;UBERON:0000468!7.59e-08!333;UBERON:0002346!9.47e-08!71;UBERON:0003075!9.47e-08!71;UBERON:0007284!9.47e-08!71
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.50e-09,10;UBERON:0000411,4.50e-09,10;UBERON:0001950,4.50e-09,10;UBERON:0002619,2.53e-07,17;UBERON:0000025,3.59e-07,114;UBERON:0000956,4.14e-07,21;UBERON:0001869,4.14e-07,21;UBERON:0000203,4.14e-07,21;UBERON:0004111,9.01e-07,122
|phase1_expression=4.16387002472464,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.01237633694913,1.39912375625629,0.157731082679119,0.137114433605739,0,0.850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,0,0.755380907853464,0.202753862439029,2.9367480345869,1.56478268869608,1.74420125104357,6.81027166476863,1.94429899074283,1.81982348112971,0,0,0,0,0.771778308107841,1.14613375975503,7.73508138416164,0.404632921719196,0,0.633831403506179,0.338844532069132,1.77858959222228,0,0,0,2.39680088414724,2.30530983192933,1.03689612308478,0.945041568321835,1.47227472945967,2.28520787523043,1.98781686856452,0.244981598429908,0.191690942036473,0,0,1.53224805702225,1.0752457327937,0.659431438650969,0.365950574409639,0,0.279182999001381,1.12552522006336,1.68078072554491,2.65165726926301,3.55929201997757,0.559198337475902,0.302904773332736,0.302286240427142,8.11620568364698,1.72084775396277,2.03991400112325,2.15881276655127,1.29955283489534,2.24013443548668,1.54488862144927,0.340860645156116,0.259786004602869,0.35333957451034,5.49289337129054,0,0,0,0.216491041011214,0.253359865475099,1.51657333504435,1.25602267690966,0,21.3756680253348,2.4287945747259,3.04465478312141,1.61430848079241,4.37095657602605,4.35078216402108,10.9329934456818,1.23597483867187,0.578397427679647,0.884610551949874,0.970601099684455,0.662524555381181,0,1.86391761218122,1.75668478206928,2.30391377494801,0.255457055208591,0,0,0,0.898743836428936,2.74500361691176,0.251308704225729,11.9938780932671,11.2514801225345,1.24672826735736,2.43361894601636,1.2220723662038,0.497627882440372,0,0.631325567659422,0.520481771850815,0.689706313300419,0.720248519221397,1.9591626318643,1.02054748726992,0.768682321709099,1.40552586839593,0.776110112217047,0.215567992932842,0.756424320671277,1.23165786914764,0.876782929710299,0.834141747676794,1.0447564995665,0.61734640922383,2.7864797354589,0,0,0,1.03562886267751,3.04883877975425,2.88099298337624,2.84093682702252,1.18058539048442,0.462801338662135,1.16266972375204,0.536546802799238,0.817357396570186,0.658239399653922,0.492502392237286,0.56748166682099,0.292399974850665,1.3173006917463,0.805238512562231,4.6263788684108,1.54356918568927,0,0,1.06644125267617,0.464473343720877,0.515469845288373,1.00841762311671,0.889512175379481,0.570676878337677,0,1.64698954724011,4.52403375840485,5.37182474511107,3.8992817423824,0,0,0.199141273254367,1.70701110857774,0.685491075658373,0,0.610953983535943,0,0.350679099451593,0.189709611372772,0,0.156998727841375,0.246794327843601,1.77871576252289,1.00107063429656,1.37591296579242,0.224862112384854,1.62288097110802,4.3411888755435,2.5462585178142,11.5078454980324,7.29608520487659,4.11842119782122,5.75072826109418,1.11642284300551,2.49630138491648,2.77836765741823,1.07638448113147,1.4473305640901,0.739012760666419,1.89491411770485,2.77040459951444,2.37643120085263,2.58159273117352,1.67506257441816,1.42826184531608,0.975668239288994,0.630540576424764,0.44292937929755,0.637819074629948,0.491589944147214,0.172684981865896,0.433947175744535,1.50791283939272,2.17562273527484,0,0.275936746304732,0.321101179975584,0.234423373184406,1.80328439914343,1.76729649043061,0.94652465824877,1.17131623288992,1.50796378412959,1.67278158566786,3.34198011123591,2.54768877709949,2.83367491172426,1.16902343164525,0.790575555893047,1.92792789853084,13.3423680095772,3.20518086601059,3.4206261464251,1.15479086080775,0,0.728341908464944,0.906970670894253,0.377210159511796,0.885905678642318,0.922305443831782,2.32585463851399,1.45413491791002,2.13898427030833,0.948110273807448,1.05418608574999,0,2.7235168460303,0.900305470156551,2.06973894052407,3.00071849044229,1.41872186913819,0.891844088010353,0.822745103010605,0.304464949114599,0.23467170806371,0.63549621259146,0,0.32977250588296,0.968786560175433,0.180938774784468,0.716234064018819,2.79039529566604,0.582961673259701,0.556275906031529,1.87957968877638,0.82554747185289,2.03713980106683,2.44878994106098,0.546776910884101,2.28778173206523,0,0.279902904647316,0.276399947608848,0,2.05618395827738,1.82987520414164,0.86404272657441,1.67270636811575,0.655087691238533,0.539457385539283,0.826534557253359,0.523511883968059,1.68499465279331,0,0,5.08356256549528,4.79829622325583,5.44463327363333,3.09983576346555,5.23763989021412,5.39843297770468,5.33837977860195,2.62148361064277,0.966336483304024,0.576060012515731,0,0.608175645870493,0.616265742988964,0.129920822977795,0.179026695667481,0,0,0,0,0,0.100826185136841,0,0,0,0,0.443971906748129,0.0897138566094757,0.503653849092235,1.15913756419314,0.187682475451182,1.09890974560359,0.643105137237198,0,6.7770221114048,9.66682996665071,6.87474616127276,7.73339320546594,16.4419804744954,15.8632718451837,15.5255175053315,17.1122057225204,16.7662691324156,12.4262474820437,0.518936737920883,2.39414924040619,1.02440163452481,2.18796045361465,0.628839487883947,0.919217542250071,1.11123363900808,2.06035057238894,1.60459604795908,2.52697211763797,1.2673964994512,1.320384389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|short_description=p3@St3gal5
}}

Revision as of 10:34, 14 September 2013

Short description:p3@St3gal5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_St3gal5_5end
Coexpression cluster:MCL_coexpression_mm9:3574
Association with transcript: 150bp_to_ENSMUST00000114112, NM_011375, uc009chz.1_5end
EntrezGene:St3gal5
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@St3gal5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.81
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.74
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.12
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.49
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D721.38
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F54.37
adrenal gland, neonate N00.CNhs11191.1311-23C14.35
adrenal gland, neonate N25.CNhs11223.1377-27I310.93
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D511.99
cortex, neonate N30.CNhs11107.1392-42F211.25
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I92.88
heart, embryo E14.CNhs10597.403-26D42.84
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G11.54
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B84.52
intestine, neonate N07.CNhs11095.720-20F25.37
intestine, neonate N10.CNhs11098.755-23A53.90
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F54.34
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G411.51
liver, neonate N00.CNhs11117.641-24F47.30
liver, neonate N03.CNhs11123.1345-25G24.12
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F82.77
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I713.34
ovary, embryo E18.CNhs11040.505-44H73.21
ovary, neonate N00.CNhs11217.1299-22I43.42
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C42.79
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D12.45
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F55.08
testis, embryo E15.CNhs11034.443-27C54.80
testis, embryo E16.CNhs11033.470-26G55.44
testis, embryo E17.CNhs11029.486-18I53.10
testis, embryo E18.CNhs11027.503-18G55.24
testis, neonate N00.CNhs11189.1300-22B75.40
testis, neonate N07.CNhs11222.726-26I45.34
testis, neonate N10.CNhs11204.763-44D92.62
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.73
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A416.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A615.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A717.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.77
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.43
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
occipital lobe4.50e-0910
visual cortex4.50e-0910
neocortex4.50e-0910
regional part of cerebral cortex2.53e-0717
tube3.59e-07114
cerebral cortex4.14e-0721
cerebral hemisphere4.14e-0721
pallium4.14e-0721
anatomical conduit9.01e-07122







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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