FFCP PHASE1:Mm9::chr6:6167023..6167125,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=50799|HGNC=|MCL_coexpression_id=8|UniProt=Q9QXX4,Q8C140|association_with_transcript=47bp_to_ENSMUST00000015256,NM_001177572,NM_015829,uc009awp.2,uc009awq.2_5end|description=CAGE_peak_1_at_Slc25a13_5end|id=chr6:6167023..6167125,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009854!2.16e-13!23;UBERON:0009856!2.16e-13!23;UBERON:0002107!3.41e-13!22;UBERON:0007499!3.41e-13!22;UBERON:0006925!3.41e-13!22;UBERON:0009497!3.41e-13!22;UBERON:0000015!3.41e-13!22;UBERON:0002423!3.41e-13!22;UBERON:0006235!3.41e-13!22;UBERON:0008835!3.41e-13!22;UBERON:0003894!3.41e-13!22;UBERON:0004161!3.41e-13!22;UBERON:0008836!3.41e-13!22;UBERON:0003914!2.54e-12!47;UBERON:0005172!2.80e-12!49;UBERON:0005173!2.80e-12!49;UBERON:0002417!2.80e-12!49;UBERON:0000916!2.80e-12!49;UBERON:0002365!6.25e-11!25;UBERON:0002330!6.25e-11!25;UBERON:0001007!4.09e-10!128;UBERON:0001555!4.09e-10!128;UBERON:0007026!4.09e-10!128;UBERON:0004119!4.61e-10!130;UBERON:0000925!4.61e-10!130;UBERON:0006595!4.61e-10!130;UBERON:0004921!5.91e-10!126;UBERON:0004185!5.91e-10!126;UBERON:0000949!2.46e-08!72;UBERON:0009569!2.90e-08!66;UBERON:0003929!6.52e-08!55;UBERON:0000160!6.67e-08!43;UBERON:0005177!2.58e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0009854,2.16e-13,23;UBERON:0009856,2.16e-13,23;UBERON:0002107,3.41e-13,22;UBERON:0007499,3.41e-13,22;UBERON:0006925,3.41e-13,22;UBERON:0009497,3.41e-13,22;UBERON:0000015,3.41e-13,22;UBERON:0002423,3.41e-13,22;UBERON:0006235,3.41e-13,22;UBERON:0008835,3.41e-13,22;UBERON:0003894,3.41e-13,22;UBERON:0004161,3.41e-13,22;UBERON:0008836,3.41e-13,22;UBERON:0003914,2.61e-12,47;UBERON:0005172,2.80e-12,49;UBERON:0005173,2.80e-12,49;UBERON:0002417,2.80e-12,49;UBERON:0000916,2.80e-12,49;UBERON:0002365,6.24e-11,25;UBERON:0002330,6.24e-11,25;UBERON:0005177,1.11e-09,79;UBERON:0000949,2.56e-08,72;UBERON:0009569,2.90e-08,66;UBERON:0001007,3.38e-08,116;UBERON:0001555,3.38e-08,116;UBERON:0007026,3.38e-08,116;UBERON:0004119,3.81e-08,118;UBERON:0000925,3.81e-08,118;UBERON:0006595,3.81e-08,118;UBERON:0004921,4.69e-08,114;UBERON:0003929,6.79e-08,55;UBERON:0003104,7.60e-07,61;UBERON:0009142,7.60e-07,61|phase1_expression=4.64431656603902,18.8446720125255,21.3849642513082,39.6228116811947,31.0555352566735,18.9703577260435,17.7545606852599,1.42035655785734,1.40788722151667,0.70219357896598,3.5955773327356,3.19088635981346,1.71200729931206,0.786783621770977,4.33042690360362,4.04950534779652,2.79824751251259,2.05050407482854,2.19383093769182,2.12194825899015,18.0291775120268,7.24823943766463,7.05239430675126,18.3991286212418,15.5998311125676,23.5435105287158,23.6919097887491,31.027857506768,21.2826229791139,25.9591033652729,17.9601713630797,10.1604907753541,8.61090702618398,15.8481681015439,12.9983228888074,15.1273527276228,12.6585000882669,2.92972141515835,5.4693474116666,6.28228492768558,2.35292595212406,0.683045484958446,0.971020706062307,2.01434908760924,2.23029248682932,2.56965453026354,0,9.15705656797875,0.659058548203415,1.36100929351998,3.77963338388479,2.87505128729943,1.51004345451963,2.17608642603403,1.68046899571232,0.771778308107841,1.43266719969378,5.15672092277442,1.61853168687678,2.64495489636016,1.90149421051854,2.03306719241479,0.889294796111139,4.94944844504769,1.97773272513395,6.3943210345149,0.299600110518405,1.15265491596466,2.59224030771194,4.05017814995072,5.8890989178387,1.71390590642282,3.3130281142742,6.1245399607477,6.90087391331302,6.43453150627015,5.50579404996943,4.08599481872601,6.14426133024974,1.18697658957174,1.64677758484337,1.56274011167028,5.58365998002762,2.8138130501584,5.04234217663473,4.41942878210502,3.84403538157578,1.67759501242771,4.24066682665831,6.49915416918356,8.98579914975201,114.436375638524,99.2758147213316,189.435820264874,252.113249969696,351.701106371408,83.7048743985241,3.91989741929533,4.67614808285164,3.88673531961374,7.60554466794075,25.6652954828636,5.09610479413291,14.2213340630666,16.8863011988747,12.92135313923,20.7265022456061,122.176751299394,5.95557132388495,11.1331604298619,26.7167403219849,24.9661692215956,32.5167851131042,32.8575356404717,40.6856926689539,20.2323212040778,10.8765785803125,1.44599356919912,2.65383165584962,7.60304194752823,7.06692859073259,5.81850303762267,22.3670113461747,3.22058876712702,2.93225389538837,15.0719662573069,22.1657980335953,9.59844369589452,23.1267813272978,5.24267237916879,5.94750783664214,2.38743269014442,1.73824320192276,1.53429274398198,3.94797284663164,3.73154905055843,7.84163101647435,12.8139179728396,13.8997517138521,5.89237196482127,16.265055370338,9.65588838620586,7.56260945182467,13.4127287873786,10.3415478710018,13.8362817907638,13.493048336601,3.3631438196072,26.2992951378068,19.4779262572854,14.9558455539357,8.98702502953057,11.9560317167007,5.57203466435466,5.76189981942242,14.3304672109315,12.6398373716382,17.4996576838006,19.8914449576915,33.9686266958223,31.1919659774858,33.6716054932098,32.197284039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| ||
|EntrezGene=50799 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=Q9QXX4,Q8C140 | |||
|association_with_transcript=47bp_to_ENSMUST00000015256,NM_001177572,NM_015829,uc009awp.2,uc009awq.2_5end | |||
|description=CAGE_peak_1_at_Slc25a13_5end | |||
|id=chr6:6167023..6167125,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!2.16e-13!23;UBERON:0009856!2.16e-13!23;UBERON:0002107!3.41e-13!22;UBERON:0007499!3.41e-13!22;UBERON:0006925!3.41e-13!22;UBERON:0009497!3.41e-13!22;UBERON:0000015!3.41e-13!22;UBERON:0002423!3.41e-13!22;UBERON:0006235!3.41e-13!22;UBERON:0008835!3.41e-13!22;UBERON:0003894!3.41e-13!22;UBERON:0004161!3.41e-13!22;UBERON:0008836!3.41e-13!22;UBERON:0003914!2.54e-12!47;UBERON:0005172!2.80e-12!49;UBERON:0005173!2.80e-12!49;UBERON:0002417!2.80e-12!49;UBERON:0000916!2.80e-12!49;UBERON:0002365!6.25e-11!25;UBERON:0002330!6.25e-11!25;UBERON:0001007!4.09e-10!128;UBERON:0001555!4.09e-10!128;UBERON:0007026!4.09e-10!128;UBERON:0004119!4.61e-10!130;UBERON:0000925!4.61e-10!130;UBERON:0006595!4.61e-10!130;UBERON:0004921!5.91e-10!126;UBERON:0004185!5.91e-10!126;UBERON:0000949!2.46e-08!72;UBERON:0009569!2.90e-08!66;UBERON:0003929!6.52e-08!55;UBERON:0000160!6.67e-08!43;UBERON:0005177!2.58e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,2.16e-13,23;UBERON:0009856,2.16e-13,23;UBERON:0002107,3.41e-13,22;UBERON:0007499,3.41e-13,22;UBERON:0006925,3.41e-13,22;UBERON:0009497,3.41e-13,22;UBERON:0000015,3.41e-13,22;UBERON:0002423,3.41e-13,22;UBERON:0006235,3.41e-13,22;UBERON:0008835,3.41e-13,22;UBERON:0003894,3.41e-13,22;UBERON:0004161,3.41e-13,22;UBERON:0008836,3.41e-13,22;UBERON:0003914,2.61e-12,47;UBERON:0005172,2.80e-12,49;UBERON:0005173,2.80e-12,49;UBERON:0002417,2.80e-12,49;UBERON:0000916,2.80e-12,49;UBERON:0002365,6.24e-11,25;UBERON:0002330,6.24e-11,25;UBERON:0005177,1.11e-09,79;UBERON:0000949,2.56e-08,72;UBERON:0009569,2.90e-08,66;UBERON:0001007,3.38e-08,116;UBERON:0001555,3.38e-08,116;UBERON:0007026,3.38e-08,116;UBERON:0004119,3.81e-08,118;UBERON:0000925,3.81e-08,118;UBERON:0006595,3.81e-08,118;UBERON:0004921,4.69e-08,114;UBERON:0003929,6.79e-08,55;UBERON:0003104,7.60e-07,61;UBERON:0009142,7.60e-07,61 | |||
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| |||
|short_description=p1@Slc25a13 | |||
}} |
Revision as of 10:25, 14 September 2013
Short description: | p1@Slc25a13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc25a13_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 47bp_to_ENSMUST00000015256, NM_001177572, NM_015829, uc009awp.2, uc009awq.2_5end |
EntrezGene: | Slc25a13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 2.16e-13 | 23 |
sac | 2.16e-13 | 23 |
liver | 3.41e-13 | 22 |
epithelial sac | 3.41e-13 | 22 |
digestive gland | 3.41e-13 | 22 |
epithelium of foregut-midgut junction | 3.41e-13 | 22 |
anatomical boundary | 3.41e-13 | 22 |
hepatobiliary system | 3.41e-13 | 22 |
foregut-midgut junction | 3.41e-13 | 22 |
hepatic diverticulum | 3.41e-13 | 22 |
liver primordium | 3.41e-13 | 22 |
septum transversum | 3.41e-13 | 22 |
liver bud | 3.41e-13 | 22 |
epithelial tube | 2.61e-12 | 47 |
abdomen element | 2.80e-12 | 49 |
abdominal segment element | 2.80e-12 | 49 |
abdominal segment of trunk | 2.80e-12 | 49 |
abdomen | 2.80e-12 | 49 |
exocrine gland | 6.24e-11 | 25 |
exocrine system | 6.24e-11 | 25 |
trunk region element | 1.11e-09 | 79 |
endocrine system | 2.56e-08 | 72 |
subdivision of trunk | 2.90e-08 | 66 |
digestive system | 3.38e-08 | 116 |
digestive tract | 3.38e-08 | 116 |
primitive gut | 3.38e-08 | 116 |
endoderm-derived structure | 3.81e-08 | 118 |
endoderm | 3.81e-08 | 118 |
presumptive endoderm | 3.81e-08 | 118 |
subdivision of digestive tract | 4.69e-08 | 114 |
gut epithelium | 6.79e-08 | 55 |
mesenchyme | 7.60e-07 | 61 |
entire embryonic mesenchyme | 7.60e-07 | 61 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.