FFCP PHASE1:Mm9::chr6:49213978..49213989,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=101214|HGNC=|UniProt=|association_with_transcript=33bp_to_uc009bwo.1_5end|description=CAGE_peak_2_at_Tra2a_5end|id=chr6:49213978..49213989,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002021,9.53e-07,10;UBERON:0000411,9.53e-07,10;UBERON:0001950,9.53e-07,10|phase1_expression=2.40223270657191,1.04692622291808,0.454999239389536,0,0,0.16787927191189,0.467225281191051,0.774739940649458,4.36445038670167,5.38348410540585,1.36974374580404,0.797721589953364,1.54080656938085,1.31130603628496,0.999329285446988,1.21485160433896,0.699561878128147,2.20823515750766,0.959801035240171,2.12194825899015,2.04103896362567,2.87943758482567,1.04479915655574,0.319984845586813,0,0.57423196411502,0,0.646413698057667,1.33016393619462,1.26015064879965,0.443461021310609,0,0,0,0,0.664938581433969,1.22501613757421,2.51118978442145,2.3440060335714,3.14114246384279,3.52938892818609,2.04913645487534,3.88408282424923,0.377690453926732,0.608261587317087,0,0,0,0.219686182734472,0,0.139986421625363,0,5.70460860596304,10.1550699881588,5.04140698713696,1.02903774414379,1.14613375975503,1.03134418455488,1.21389876515759,0.528990979272033,1.26766280701236,0,0,0.449949858640699,0,0,0.599200221036809,0,1.03689612308478,0.675029691658453,1.05162480675691,0.856952953211411,0.883474163806454,1.10241719293459,0.670918297127655,0,1.10115880999389,0.893811366596314,1.38245879930619,2.37395317914349,1.37231465403614,2.08365348222704,0.837548997004143,1.12552522006336,1.98637722109853,0.883885756421003,0.996601765593721,1.3047961207771,0.530083353332288,0.377857800533928,3.18850937571846,0,0.679971333707751,0,0,0.448026887097336,0.421333260395256,0.340860645156116,0.519572009205738,1.41335829804136,2.25349471642689,0,0,0,0.865964164044856,1.52015919285059,0,0.68510327831436,1.03575153458869,1.48442139064825,1.38788261412909,1.21786191324856,0.691846491768175,0.904335843315735,1.64624189989987,0.251333182659351,0.988779870937496,0.144599356919912,4.42305275974937,1.45590164952668,0.883366073841574,0.484875253135222,0,2.04946557908083,2.09446706813455,1.02182822083437,4.79260498023681,5.99902730993408,4.95573885584952,1.79748767285787,2.74500361691176,0.879580464790051,3.65031072403781,5.37002460393694,1.45451631191692,0.811206315338788,1.62942982160506,3.11017426525233,5.05445516867349,1.26265113531884,1.82168620147785,2.5289231487682,0.900310649026746,1.9591626318643,1.76894897793452,1.5373646434182,1.59292931751539,2.32833033665114,0.862271971731369,2.08016688184601,1.05570674498369,1.09597866213787,0.834141747676794,0.696504333044333,1.02891068203972,1.39323986772945,7.72434506044558,5.40430604940902,4.54661599032948,0.621377317606506,1.64168241986767,0.720248245844059,0.23674473558521,0.393528463494808,1.23413690309903,1.16266972375204,1.87791380979733,1.40118410840603,1.81015834904829,0.32833492815819,0.891756905004413,0.877199924551994,0.219550115291051,0.402619256281115,3.36463917702604,1.3377599609307,0.991256348951394,1.05780226665418,0.853153002140936,1.16118335930219,1.15980715189884,0.403367049246685,1.11189021922435,0.570676878337677,0.474529061544512,0.494096864172033,0.754005626400808,0.198956472041151,0.19496408711912,0.898819408654221,1.08069024937347,0.398282546508734,1.51734320762465,1.82797620175566,0,1.62921062276251,1.74557238450863,2.24434623649019,1.26473074248515,1.18088118383682,1.56998727841375,0.740382983530803,0,1.16791574001266,0.786235980452812,0.899448449539415,0.608580364165509,0.241177159752417,0.25462585178142,0.863088412352432,1.62135226775035,0.549122826376163,0,0.372140947668503,0,0.757736633841335,0.538192240565737,0,1.66277871149944,1.70542270593436,1.62964976442026,1.18821560042632,1.40814148973101,1.34005005953453,0.714130922658041,0.975668239288994,2.83743259391144,0.664394068946325,1.91345722388985,0.655453258862952,1.03610989119537,0.433947175744535,1.50791283939272,0,0,1.37968373152366,0.481651769963376,1.28932855251423,1.80328439914343,0,0.315508219416257,1.17131623288992,0.861693590931196,0.716906393857656,0.668396022247182,1.13230612315533,0,0.876767573733936,0.790575555893047,2.57057053137446,0.567760340833074,0.35613120733451,1.14020871547503,0.989820737835213,1.32745138339963,1.94224508923985,0.906970670894253,0.565815239267694,0,1.22974059177571,1.03371317267288,1.81766864738753,0.712994756769443,1.26414703174326,0,1.03135543248187,1.70219802876894,1.26042765821917,0.129358683782755,1.71469628025274,0.709360934569094,1.78368817602071,1.48094118541909,0,1.40803024838226,1.0591603543191,0.441056796109924,0.98931751764888,1.13025098687134,1.44751019827574,1.67121281604391,0.984845398470368,1.1659233465194,0.741701208042039,1.19609616558497,0.412773735926445,0.740778109478847,2.44878994106098,1.23024804948923,1.60144721244566,2.20971958992012,3.49878630809145,3.59319931891502,0.954670618015114,2.05618395827738,1.21991680276109,0.64803204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| ||
|EntrezGene=101214 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=33bp_to_uc009bwo.1_5end | |||
|description=CAGE_peak_2_at_Tra2a_5end | |||
|id=chr6:49213978..49213989,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,9.53e-07,10;UBERON:0000411,9.53e-07,10;UBERON:0001950,9.53e-07,10 | |||
|phase1_expression=2.40223270657191,1.04692622291808,0.454999239389536,0,0,0.16787927191189,0.467225281191051,0.774739940649458,4.36445038670167,5.38348410540585,1.36974374580404,0.797721589953364,1.54080656938085,1.31130603628496,0.999329285446988,1.21485160433896,0.699561878128147,2.20823515750766,0.959801035240171,2.12194825899015,2.04103896362567,2.87943758482567,1.04479915655574,0.319984845586813,0,0.57423196411502,0,0.646413698057667,1.33016393619462,1.26015064879965,0.443461021310609,0,0,0,0,0.664938581433969,1.22501613757421,2.51118978442145,2.3440060335714,3.14114246384279,3.52938892818609,2.04913645487534,3.88408282424923,0.377690453926732,0.608261587317087,0,0,0,0.219686182734472,0,0.139986421625363,0,5.70460860596304,10.1550699881588,5.04140698713696,1.02903774414379,1.14613375975503,1.03134418455488,1.21389876515759,0.528990979272033,1.26766280701236,0,0,0.449949858640699,0,0,0.599200221036809,0,1.03689612308478,0.675029691658453,1.05162480675691,0.856952953211411,0.883474163806454,1.10241719293459,0.670918297127655,0,1.10115880999389,0.893811366596314,1.38245879930619,2.37395317914349,1.37231465403614,2.08365348222704,0.837548997004143,1.12552522006336,1.98637722109853,0.883885756421003,0.996601765593721,1.3047961207771,0.530083353332288,0.377857800533928,3.18850937571846,0,0.679971333707751,0,0,0.448026887097336,0.421333260395256,0.340860645156116,0.519572009205738,1.41335829804136,2.25349471642689,0,0,0,0.865964164044856,1.52015919285059,0,0.68510327831436,1.03575153458869,1.48442139064825,1.38788261412909,1.21786191324856,0.691846491768175,0.904335843315735,1.64624189989987,0.251333182659351,0.988779870937496,0.144599356919912,4.42305275974937,1.45590164952668,0.883366073841574,0.484875253135222,0,2.04946557908083,2.09446706813455,1.02182822083437,4.79260498023681,5.99902730993408,4.95573885584952,1.79748767285787,2.74500361691176,0.879580464790051,3.65031072403781,5.37002460393694,1.45451631191692,0.811206315338788,1.62942982160506,3.11017426525233,5.05445516867349,1.26265113531884,1.82168620147785,2.5289231487682,0.900310649026746,1.9591626318643,1.76894897793452,1.5373646434182,1.59292931751539,2.32833033665114,0.862271971731369,2.08016688184601,1.05570674498369,1.09597866213787,0.834141747676794,0.696504333044333,1.02891068203972,1.39323986772945,7.72434506044558,5.40430604940902,4.54661599032948,0.621377317606506,1.64168241986767,0.720248245844059,0.23674473558521,0.393528463494808,1.23413690309903,1.16266972375204,1.87791380979733,1.40118410840603,1.81015834904829,0.32833492815819,0.891756905004413,0.877199924551994,0.219550115291051,0.402619256281115,3.36463917702604,1.3377599609307,0.991256348951394,1.05780226665418,0.853153002140936,1.16118335930219,1.15980715189884,0.403367049246685,1.11189021922435,0.570676878337677,0.474529061544512,0.494096864172033,0.754005626400808,0.198956472041151,0.19496408711912,0.898819408654221,1.08069024937347,0.398282546508734,1.51734320762465,1.82797620175566,0,1.62921062276251,1.74557238450863,2.24434623649019,1.26473074248515,1.18088118383682,1.56998727841375,0.740382983530803,0,1.16791574001266,0.786235980452812,0.899448449539415,0.608580364165509,0.241177159752417,0.25462585178142,0.863088412352432,1.62135226775035,0.549122826376163,0,0.372140947668503,0,0.757736633841335,0.538192240565737,0,1.66277871149944,1.70542270593436,1.62964976442026,1.18821560042632,1.40814148973101,1.34005005953453,0.714130922658041,0.975668239288994,2.83743259391144,0.664394068946325,1.91345722388985,0.655453258862952,1.03610989119537,0.433947175744535,1.50791283939272,0,0,1.37968373152366,0.481651769963376,1.28932855251423,1.80328439914343,0,0.315508219416257,1.17131623288992,0.861693590931196,0.716906393857656,0.668396022247182,1.13230612315533,0,0.876767573733936,0.790575555893047,2.57057053137446,0.567760340833074,0.35613120733451,1.14020871547503,0.989820737835213,1.32745138339963,1.94224508923985,0.906970670894253,0.565815239267694,0,1.22974059177571,1.03371317267288,1.81766864738753,0.712994756769443,1.26414703174326,0,1.03135543248187,1.70219802876894,1.26042765821917,0.129358683782755,1.71469628025274,0.709360934569094,1.78368817602071,1.48094118541909,0,1.40803024838226,1.0591603543191,0.441056796109924,0.98931751764888,1.13025098687134,1.44751019827574,1.67121281604391,0.984845398470368,1.1659233465194,0.741701208042039,1.19609616558497,0.412773735926445,0.740778109478847,2.44878994106098,1.23024804948923,1.60144721244566,2.20971958992012,3.49878630809145,3.59319931891502,0.954670618015114,2.05618395827738,1.21991680276109,0.648032044930808,0.836353184057875,1.09181281873089,0.944050424693745,1.23980183588004,0.523511883968059,0.388844919875379,1.24267862617385,12.9649375897364,0.897099276263873,1.15820943319968,1.36115831840833,0.516639293910924,1.18269287843545,2.8165737274981,1.69265700297135,1.67774951081137,9.18019659138823,7.20075015644664,0.948033361884535,1.21635129174099,1.74608627180206,0.909445760844565,0.358053391334963,0.596044064343795,0.961563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| |||
|short_description=p2@Tra2a | |||
}} | |||
Revision as of 10:13, 14 September 2013
| Short description: | p2@Tra2a |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Tra2a_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 33bp_to_uc009bwo.1_5end |
| EntrezGene: | Tra2a |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| occipital lobe | 9.53e-07 | 10 |
| visual cortex | 9.53e-07 | 10 |
| neocortex | 9.53e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
