FFCP PHASE1:Mm9::chr6:48857727..48857754,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=76507|HGNC=|MCL_coexpression_id=56|UniProt=|association_with_transcript=373bp_to_ENSMUST00000161184_5end|description=CAGE_peak_3_at_Abp1_5end|id=chr6:48857727..48857754,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!9.84e-09!17;UBERON:0005181!9.84e-09!17;UBERON:0002224!9.84e-09!17;UBERON:0000915!9.84e-09!17;UBERON:0008947!9.84e-09!17;UBERON:0003258!9.84e-09!17;UBERON:0000474!1.19e-08!9;UBERON:0003134!1.14e-07!8;UBERON:0002048!7.55e-07!14;UBERON:0000117!7.55e-07!14;UBERON:0000171!7.55e-07!14;UBERON:0000170!7.55e-07!14;UBERON:0005597!7.55e-07!14;UBERON:0000118!7.55e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0005178,3.85e-18,17;UBERON:0005181,3.85e-18,17;UBERON:0002224,3.85e-18,17;UBERON:0000915,3.85e-18,17;UBERON:0008947,3.85e-18,17;UBERON:0003258,3.85e-18,17;UBERON:0002048,1.23e-17,14;UBERON:0000117,1.23e-17,14;UBERON:0000171,1.23e-17,14;UBERON:0000170,1.23e-17,14;UBERON:0005597,1.23e-17,14;UBERON:0000118,1.23e-17,14;UBERON:0000474,7.70e-17,9;UBERON:0005153,2.44e-14,17;UBERON:0003975,5.63e-14,5;UBERON:0005631,6.29e-14,3;UBERON:0000478,6.29e-14,3;UBERON:0000158,6.29e-14,3;UBERON:0003100,1.10e-13,11;UBERON:0003134,2.34e-13,8;UBERON:0005157,4.99e-12,20;UBERON:0005795,1.17e-10,4;UBERON:0000995,1.17e-10,4;UBERON:0001987,5.74e-10,2;UBERON:0003124,5.74e-10,2;UBERON:0004340,5.74e-10,2;UBERON:0004175,8.31e-08,9;UBERON:0000065,9.69e-07,41|phase1_expression=0,0.697950815278722,0.909998478779072,0.90739263392049,0.500895729946347,0.503637815735669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.47997726838022,0,0,1.29228598847722,0,0.950117097281869,1.00812051903972,0.665191531965914,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,0,0,0,0,0.677689064138264,0,0,0,0,0.299600110518405,1.53687322128622,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0.56276261003168,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.649473123033642,0.253359865475099,2.02209778005913,0.11418387971906,0,0,0,0,0,0,0,0,16.8092578059374,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.758168275301024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.210289948564127,0,0,0.264450566663544,0.426576501070468,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0,0.397912944082302,0,0,0.216138049874694,0.398282546508734,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0851914099963,0,0,0,0.234690248288502,0.167506257441816,1.6663054862021,0.390267295715598,1.41871629695572,1.55025282754142,1.75400245523236,4.09658286789345,2.93564469172023,3.90552458170081,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0,0.646270193198397,0,0.445597348164788,0.283076530788832,0.809621403349789,0,0,0,19.3038515883245,0.178065603667255,0.325773918707152,18.476653772924,0,0,0.302323556964751,0,0,0,0,0,0,0,0,1.03135543248187,0.340439605753788,0,0,0,0.177340233642274,0,0,0,182.80926058163,70.5400795976521,0,0,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,0.170870880797853,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.240390899039938,0,0.201932899896295,0,0.100826185136841,0.194915761479505,0,0,0.453460767230423,0.221985953374065,0,0,0,61.7475344234389,0.73260649706906,1.07184189539533,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0,0.655490552289177,0.256100609619477,0.574354689556133,0.476293691283074,0.811190281613988,0.38581844092741,0.412085900803307,0.588795680537589,0,0.177475806159338,0.715308569841963,0.145346416632329,0.376437521661322,0.423073039458382,0.548783918618318,0,1.08643291076689,0.561142271657738,0,0.197008964751127,2.04615521584845,0,0.385813221962283,0.499621155875892,0,0.429742108096597,0,0,0|short_description=p3@Abp1}} | ||
|EntrezGene=76507 | |||
|HGNC= | |||
|MCL_coexpression_id=56 | |||
|UniProt= | |||
|association_with_transcript=373bp_to_ENSMUST00000161184_5end | |||
|description=CAGE_peak_3_at_Abp1_5end | |||
|id=chr6:48857727..48857754,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!9.84e-09!17;UBERON:0005181!9.84e-09!17;UBERON:0002224!9.84e-09!17;UBERON:0000915!9.84e-09!17;UBERON:0008947!9.84e-09!17;UBERON:0003258!9.84e-09!17;UBERON:0000474!1.19e-08!9;UBERON:0003134!1.14e-07!8;UBERON:0002048!7.55e-07!14;UBERON:0000117!7.55e-07!14;UBERON:0000171!7.55e-07!14;UBERON:0000170!7.55e-07!14;UBERON:0005597!7.55e-07!14;UBERON:0000118!7.55e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,3.85e-18,17;UBERON:0005181,3.85e-18,17;UBERON:0002224,3.85e-18,17;UBERON:0000915,3.85e-18,17;UBERON:0008947,3.85e-18,17;UBERON:0003258,3.85e-18,17;UBERON:0002048,1.23e-17,14;UBERON:0000117,1.23e-17,14;UBERON:0000171,1.23e-17,14;UBERON:0000170,1.23e-17,14;UBERON:0005597,1.23e-17,14;UBERON:0000118,1.23e-17,14;UBERON:0000474,7.70e-17,9;UBERON:0005153,2.44e-14,17;UBERON:0003975,5.63e-14,5;UBERON:0005631,6.29e-14,3;UBERON:0000478,6.29e-14,3;UBERON:0000158,6.29e-14,3;UBERON:0003100,1.10e-13,11;UBERON:0003134,2.34e-13,8;UBERON:0005157,4.99e-12,20;UBERON:0005795,1.17e-10,4;UBERON:0000995,1.17e-10,4;UBERON:0001987,5.74e-10,2;UBERON:0003124,5.74e-10,2;UBERON:0004340,5.74e-10,2;UBERON:0004175,8.31e-08,9;UBERON:0000065,9.69e-07,41 | |||
|phase1_expression=0,0.697950815278722,0.909998478779072,0.90739263392049,0.500895729946347,0.503637815735669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.47997726838022,0,0,1.29228598847722,0,0.950117097281869,1.00812051903972,0.665191531965914,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,0,0,0,0,0.677689064138264,0,0,0,0,0.299600110518405,1.53687322128622,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0.56276261003168,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.649473123033642,0.253359865475099,2.02209778005913,0.11418387971906,0,0,0,0,0,0,0,0,16.8092578059374,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.758168275301024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.210289948564127,0,0,0.264450566663544,0.426576501070468,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0,0.397912944082302,0,0,0.216138049874694,0.398282546508734,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0851914099963,0,0,0,0.234690248288502,0.167506257441816,1.6663054862021,0.390267295715598,1.41871629695572,1.55025282754142,1.75400245523236,4.09658286789345,2.93564469172023,3.90552458170081,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0,0.646270193198397,0,0.445597348164788,0.283076530788832,0.809621403349789,0,0,0,19.3038515883245,0.178065603667255,0.325773918707152,18.476653772924,0,0,0.302323556964751,0,0,0,0,0,0,0,0,1.03135543248187,0.340439605753788,0,0,0,0.177340233642274,0,0,0,182.80926058163,70.5400795976521,0,0,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,0.170870880797853,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.240390899039938,0,0.201932899896295,0,0.100826185136841,0.194915761479505,0,0,0.453460767230423,0.221985953374065,0,0,0,61.7475344234389,0.73260649706906,1.07184189539533,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0,0.655490552289177,0.256100609619477,0.574354689556133,0.476293691283074,0.811190281613988,0.38581844092741,0.412085900803307,0.588795680537589,0,0.177475806159338,0.715308569841963,0.145346416632329,0.376437521661322,0.423073039458382,0.548783918618318,0,1.08643291076689,0.561142271657738,0,0.197008964751127,2.04615521584845,0,0.385813221962283,0.499621155875892,0,0.429742108096597,0,0,0 | |||
|short_description=p3@Abp1 | |||
}} |
Revision as of 10:11, 14 September 2013
Short description: | p3@Abp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Abp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:56 |
Association with transcript: | 373bp_to_ENSMUST00000161184_5end |
EntrezGene: | Abp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 3.85e-18 | 17 |
thoracic segment organ | 3.85e-18 | 17 |
thoracic cavity | 3.85e-18 | 17 |
thoracic segment of trunk | 3.85e-18 | 17 |
respiratory primordium | 3.85e-18 | 17 |
endoderm of foregut | 3.85e-18 | 17 |
lung | 1.23e-17 | 14 |
respiratory tube | 1.23e-17 | 14 |
respiration organ | 1.23e-17 | 14 |
pair of lungs | 1.23e-17 | 14 |
lung primordium | 1.23e-17 | 14 |
lung bud | 1.23e-17 | 14 |
female reproductive system | 7.70e-17 | 9 |
epithelial bud | 2.44e-14 | 17 |
internal female genitalia | 5.63e-14 | 5 |
extraembryonic membrane | 6.29e-14 | 3 |
extraembryonic structure | 6.29e-14 | 3 |
membranous layer | 6.29e-14 | 3 |
female organism | 1.10e-13 | 11 |
female reproductive organ | 2.34e-13 | 8 |
epithelial fold | 4.99e-12 | 20 |
embryonic uterus | 1.17e-10 | 4 |
uterus | 1.17e-10 | 4 |
placenta | 5.74e-10 | 2 |
chorion | 5.74e-10 | 2 |
allantois | 5.74e-10 | 2 |
internal genitalia | 8.31e-08 | 9 |
respiratory tract | 9.69e-07 | 41 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.